Experiment: Zinc chloride 0.0000015625 M
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt Pf6N2E2_200 and Pf6N2E2_201 overlap by 10 nucleotides Pf6N2E2_201 and Pf6N2E2_202 overlap by 4 nucleotides
Pf6N2E2_200 - Possible glycosyltransferase, at 250,861 to 251,967
_200
Pf6N2E2_201 - UDP-N-acetylglucosamine 2-epimerase (EC 5.1.3.14), at 251,958 to 253,067
_201
Pf6N2E2_202 - 4Fe-4S ferredoxin, iron-sulfur binding, at 253,064 to 254,650
_202
Position (kb) 251
252
253
254 Strain fitness (log2 ratio) -3
-2
-1
0
1
2 at 251.087 kb on + strand, within Pf6N2E2_200 at 251.088 kb on - strand, within Pf6N2E2_200 at 251.222 kb on - strand, within Pf6N2E2_200 at 251.222 kb on - strand, within Pf6N2E2_200 at 251.422 kb on + strand, within Pf6N2E2_200 at 251.423 kb on - strand, within Pf6N2E2_200 at 251.476 kb on + strand, within Pf6N2E2_200 at 251.476 kb on + strand, within Pf6N2E2_200 at 251.477 kb on - strand, within Pf6N2E2_200 at 251.544 kb on - strand, within Pf6N2E2_200 at 251.574 kb on - strand, within Pf6N2E2_200 at 251.870 kb on - strand at 251.954 kb on + strand at 251.954 kb on + strand at 251.954 kb on + strand at 251.955 kb on - strand at 251.955 kb on - strand at 251.955 kb on - strand at 251.977 kb on + strand at 251.977 kb on + strand at 252.056 kb on - strand at 252.241 kb on + strand, within Pf6N2E2_201 at 252.242 kb on - strand, within Pf6N2E2_201 at 252.242 kb on - strand, within Pf6N2E2_201 at 252.242 kb on - strand, within Pf6N2E2_201 at 252.274 kb on + strand, within Pf6N2E2_201 at 252.274 kb on + strand, within Pf6N2E2_201 at 252.274 kb on + strand, within Pf6N2E2_201 at 252.688 kb on - strand, within Pf6N2E2_201 at 252.688 kb on - strand, within Pf6N2E2_201 at 253.053 kb on + strand at 253.054 kb on - strand at 253.054 kb on - strand at 253.054 kb on - strand at 253.091 kb on + strand at 253.091 kb on + strand at 253.091 kb on + strand at 253.183 kb on + strand at 253.183 kb on + strand at 253.183 kb on + strand at 253.184 kb on - strand at 253.338 kb on + strand, within Pf6N2E2_202 at 253.338 kb on + strand, within Pf6N2E2_202 at 253.339 kb on - strand, within Pf6N2E2_202 at 253.472 kb on - strand, within Pf6N2E2_202 at 253.472 kb on - strand, within Pf6N2E2_202 at 253.472 kb on - strand, within Pf6N2E2_202 at 253.604 kb on - strand, within Pf6N2E2_202 at 253.941 kb on + strand, within Pf6N2E2_202 at 253.941 kb on + strand, within Pf6N2E2_202 at 253.942 kb on - strand, within Pf6N2E2_202 at 253.942 kb on - strand, within Pf6N2E2_202 at 253.942 kb on - strand, within Pf6N2E2_202 at 253.942 kb on - strand, within Pf6N2E2_202 at 253.942 kb on - strand, within Pf6N2E2_202 at 253.942 kb on - strand, within Pf6N2E2_202 at 253.942 kb on - strand, within Pf6N2E2_202 at 253.942 kb on - strand, within Pf6N2E2_202 at 253.942 kb on - strand, within Pf6N2E2_202 at 253.942 kb on - strand, within Pf6N2E2_202
Per-strain Table
Position Strand Gene LocusTag Fraction Zinc chloride 0.0000015625 M remove 251,087 + Pf6N2E2_200 0.20 -0.6 251,088 - Pf6N2E2_200 0.21 +0.3 251,222 - Pf6N2E2_200 0.33 +1.7 251,222 - Pf6N2E2_200 0.33 +2.3 251,422 + Pf6N2E2_200 0.51 -1.8 251,423 - Pf6N2E2_200 0.51 -0.6 251,476 + Pf6N2E2_200 0.56 +2.4 251,476 + Pf6N2E2_200 0.56 -1.0 251,477 - Pf6N2E2_200 0.56 +0.3 251,544 - Pf6N2E2_200 0.62 +1.9 251,574 - Pf6N2E2_200 0.64 -1.1 251,870 - -1.9 251,954 + +0.9 251,954 + +1.0 251,954 + -1.8 251,955 - -2.5 251,955 - +0.4 251,955 - +0.6 251,977 + +0.7 251,977 + +0.8 252,056 - +0.1 252,241 + Pf6N2E2_201 0.25 -1.6 252,242 - Pf6N2E2_201 0.26 -2.1 252,242 - Pf6N2E2_201 0.26 -1.7 252,242 - Pf6N2E2_201 0.26 +0.7 252,274 + Pf6N2E2_201 0.28 -3.2 252,274 + Pf6N2E2_201 0.28 +0.3 252,274 + Pf6N2E2_201 0.28 +0.0 252,688 - Pf6N2E2_201 0.66 -0.4 252,688 - Pf6N2E2_201 0.66 -0.7 253,053 + +0.6 253,054 - -1.0 253,054 - -2.6 253,054 - -1.7 253,091 + +1.9 253,091 + +1.2 253,091 + +2.1 253,183 + -1.0 253,183 + +0.7 253,183 + +0.6 253,184 - -0.5 253,338 + Pf6N2E2_202 0.17 +1.1 253,338 + Pf6N2E2_202 0.17 -3.5 253,339 - Pf6N2E2_202 0.17 -0.9 253,472 - Pf6N2E2_202 0.26 +0.9 253,472 - Pf6N2E2_202 0.26 +1.9 253,472 - Pf6N2E2_202 0.26 +1.5 253,604 - Pf6N2E2_202 0.34 -0.3 253,941 + Pf6N2E2_202 0.55 -1.7 253,941 + Pf6N2E2_202 0.55 -1.1 253,942 - Pf6N2E2_202 0.55 +0.1 253,942 - Pf6N2E2_202 0.55 -0.9 253,942 - Pf6N2E2_202 0.55 -1.2 253,942 - Pf6N2E2_202 0.55 +0.0 253,942 - Pf6N2E2_202 0.55 -3.1 253,942 - Pf6N2E2_202 0.55 +0.8 253,942 - Pf6N2E2_202 0.55 +0.0 253,942 - Pf6N2E2_202 0.55 -0.5 253,942 - Pf6N2E2_202 0.55 -2.2 253,942 - Pf6N2E2_202 0.55 -0.6
Or see this region's nucleotide sequence