Strain Fitness in Pseudomonas fluorescens FW300-N2E2 around Pf6N2E2_1803
Experiment: Zinc chloride 0.0000015625 M
Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.
Per-strain Table
Position | Strand | Gene | LocusTag | Fraction | Zinc chloride 0.0000015625 M |
---|---|---|---|---|---|
remove | |||||
2,131,678 | + | +0.6 | |||
2,131,678 | + | -0.1 | |||
2,131,679 | - | -0.7 | |||
2,131,687 | + | +1.4 | |||
2,131,688 | - | +0.8 | |||
2,131,688 | - | -1.7 | |||
2,131,688 | - | +1.1 | |||
2,131,751 | + | -0.4 | |||
2,131,751 | + | -2.4 | |||
2,131,752 | - | +1.0 | |||
2,131,838 | + | Pf6N2E2_1802 | 0.14 | -1.4 | |
2,131,945 | - | Pf6N2E2_1802 | 0.27 | -1.8 | |
2,132,176 | + | Pf6N2E2_1802 | 0.54 | -1.7 | |
2,132,177 | - | Pf6N2E2_1802 | 0.54 | -1.0 | |
2,132,181 | - | Pf6N2E2_1802 | 0.55 | +0.4 | |
2,132,214 | - | Pf6N2E2_1802 | 0.59 | +1.1 | |
2,132,282 | + | Pf6N2E2_1802 | 0.67 | -2.1 | |
2,132,298 | - | Pf6N2E2_1802 | 0.69 | +0.6 | |
2,132,298 | - | Pf6N2E2_1802 | 0.69 | -1.2 | |
2,132,403 | + | Pf6N2E2_1802 | 0.81 | +1.4 | |
2,132,502 | + | +1.2 | |||
2,133,114 | + | Pf6N2E2_1803 | 0.63 | -1.9 | |
2,133,115 | - | Pf6N2E2_1803 | 0.63 | -1.4 | |
2,133,172 | - | Pf6N2E2_1803 | 0.69 | -2.3 | |
2,133,234 | + | Pf6N2E2_1803 | 0.76 | -1.4 | |
2,133,235 | - | Pf6N2E2_1803 | 0.76 | -0.1 | |
2,133,440 | - | +0.7 | |||
2,133,541 | + | -2.5 | |||
2,134,345 | - | Pf6N2E2_1804 | 0.65 | -0.7 | |
2,134,424 | + | Pf6N2E2_1804 | 0.71 | +1.1 | |
2,134,425 | - | Pf6N2E2_1804 | 0.71 | +0.1 |
Or see this region's nucleotide sequence