Strain Fitness in Pantoea sp. MT58 around IAI47_16635

Experiment: Survival; Treatment=FW300 (pH7.4) with 5.0 mM Glucose; TreatmentDuration=24hrs; Outgrowth=LBkan50

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Survival; Treatment=FW300 (pH7.4) with 5.0 mM Glucose; TreatmentDuration=24hrs; Outgrowth=LBkan50
3,523,734	-		IAI47_16625	0.63	-0.1
3,523,734	-		IAI47_16625	0.63	-1.0
3,523,747	-		IAI47_16625	0.64	+0.4
3,523,747	-		IAI47_16625	0.64	+2.4
3,523,747	-		IAI47_16625	0.64	+0.0
3,523,781	-		IAI47_16625	0.67	+0.6
3,523,890	+		IAI47_16625	0.77	-1.3
3,523,924	+		IAI47_16625	0.80	+1.0
3,524,019	+		IAI47_16625	0.88	+1.4
3,524,019	+		IAI47_16625	0.88	-1.0
3,524,020	-		IAI47_16625	0.88	-2.0
3,524,020	-		IAI47_16625	0.88	-0.4
3,524,020	-		IAI47_16625	0.88	+0.2
3,524,020	-		IAI47_16625	0.88	+0.5
3,524,026	+		IAI47_16625	0.89	+1.5
3,524,026	+		IAI47_16625	0.89	+1.7
3,524,027	-		IAI47_16625	0.89	-1.2
3,524,027	-		IAI47_16625	0.89	-0.7
3,524,027	-		IAI47_16625	0.89	+2.3
3,524,035	+		IAI47_16625	0.90	+0.8
3,524,035	+		IAI47_16625	0.90	-1.3
3,524,035	+		IAI47_16625	0.90	+0.9
3,524,035	+		IAI47_16625	0.90	+1.0
3,524,036	-		IAI47_16625	0.90	+1.0
3,524,036	-		IAI47_16625	0.90	-1.0
3,524,037	+		IAI47_16625	0.90	+0.6
3,524,037	+		IAI47_16625	0.90	+0.7
3,524,037	+		IAI47_16625	0.90	+0.5
3,524,065	+				-1.3
3,524,113	+				-0.7
3,524,113	+				-1.0
3,524,113	+				+1.0
3,524,113	+				+0.0
3,524,114	-				+0.3
3,524,114	-				+0.9
3,524,181	+				-0.5
3,524,181	+				+1.2
3,524,181	+				+0.9
3,524,181	+				-0.0
3,524,181	+				-1.0
3,524,181	+				+0.9
3,524,181	+				-0.3
3,524,181	+				-0.5
3,524,184	+				-0.2
3,524,184	+				-0.4
3,524,184	+				-0.7
3,524,184	+				-1.1
3,524,184	+				+0.0
3,524,197	+				+0.7
3,524,197	+				+0.4
3,524,197	+				-1.3
3,524,197	+				+0.3
3,524,197	+				-0.5
3,524,198	-				-1.0
3,524,198	-				+0.3
3,524,198	-				-2.4
3,524,198	-				+0.8
3,524,198	-				+0.7
3,524,198	-				-0.5
3,524,198	-				-0.9
3,524,200	+				-0.7
3,524,200	+				+0.2
3,524,201	-				-0.4
3,524,201	-				+0.1
3,524,201	-				-0.7
3,524,229	+				-2.5
3,524,246	-				-0.1
3,524,256	+		IAI47_16630	0.11	-0.5
3,524,262	+		IAI47_16630	0.13	-0.0
3,524,262	+		IAI47_16630	0.13	+1.3
3,524,262	+		IAI47_16630	0.13	-1.1
3,524,262	+		IAI47_16630	0.13	+0.9
3,524,263	-		IAI47_16630	0.13	-0.7
3,524,263	-		IAI47_16630	0.13	-0.8
3,524,263	-		IAI47_16630	0.13	+1.1
3,524,298	+		IAI47_16630	0.24	+0.9
3,524,299	-		IAI47_16630	0.24	+0.4
3,524,307	-		IAI47_16630	0.27	+1.5
3,524,307	-		IAI47_16630	0.27	-0.9
3,524,315	+		IAI47_16630	0.29	-0.0
3,524,316	-		IAI47_16630	0.30	-0.2
3,524,317	+		IAI47_16630	0.30	-1.0
3,524,317	+		IAI47_16630	0.30	-0.9
3,524,317	+		IAI47_16630	0.30	-0.5
3,524,317	+		IAI47_16630	0.30	-2.5
3,524,317	+		IAI47_16630	0.30	+0.2
3,524,317	+		IAI47_16630	0.30	-0.3
3,524,317	+		IAI47_16630	0.30	-1.1
3,524,317	+		IAI47_16630	0.30	-1.4
3,524,317	+		IAI47_16630	0.30	+0.5
3,524,317	+		IAI47_16630	0.30	-0.6
3,524,317	+		IAI47_16630	0.30	-2.0
3,524,317	+		IAI47_16630	0.30	+0.6
3,524,317	+		IAI47_16630	0.30	-2.3
3,524,317	+		IAI47_16630	0.30	-0.6
3,524,318	-		IAI47_16630	0.30	+0.4
3,524,318	-		IAI47_16630	0.30	-1.7
3,524,318	-		IAI47_16630	0.30	+0.8
3,524,318	-		IAI47_16630	0.30	-0.6
3,524,318	-		IAI47_16630	0.30	-1.4
3,524,318	-		IAI47_16630	0.30	-1.3
3,524,318	-		IAI47_16630	0.30	-0.5
3,524,318	-		IAI47_16630	0.30	-1.0
3,524,318	-		IAI47_16630	0.30	-0.6
3,524,318	-		IAI47_16630	0.30	-1.1
3,524,318	-		IAI47_16630	0.30	+0.9
3,524,318	-		IAI47_16630	0.30	-1.1
3,524,318	-		IAI47_16630	0.30	-0.8
3,524,318	-		IAI47_16630	0.30	+0.4
3,524,321	+		IAI47_16630	0.31	+1.0
3,524,321	+		IAI47_16630	0.31	+0.4
3,524,321	+		IAI47_16630	0.31	-0.4
3,524,321	+		IAI47_16630	0.31	+1.6
3,524,321	+		IAI47_16630	0.31	+0.6
3,524,321	+		IAI47_16630	0.31	-1.3
3,524,322	-		IAI47_16630	0.31	-1.1
3,524,322	-		IAI47_16630	0.31	-1.3
3,524,322	-		IAI47_16630	0.31	-1.7
3,524,322	-		IAI47_16630	0.31	-0.9
3,524,322	-		IAI47_16630	0.31	+0.3
3,524,355	-		IAI47_16630	0.42	+1.5
3,524,382	+		IAI47_16630	0.50	-1.2
3,524,382	+		IAI47_16630	0.50	+0.8
3,524,382	+		IAI47_16630	0.50	-0.0
3,524,382	+		IAI47_16630	0.50	-1.0
3,524,382	+		IAI47_16630	0.50	-1.9
3,524,382	+		IAI47_16630	0.50	-0.9
3,524,383	-		IAI47_16630	0.50	-0.4
3,524,383	-		IAI47_16630	0.50	-1.2
3,524,383	-		IAI47_16630	0.50	-0.9
3,524,383	-		IAI47_16630	0.50	+0.1
3,524,395	+		IAI47_16630	0.54	-0.6
3,524,396	-		IAI47_16630	0.55	+0.5
3,524,396	-		IAI47_16630	0.55	+0.9
3,524,396	-		IAI47_16630	0.55	+1.5
3,524,396	-		IAI47_16630	0.55	+1.4
3,524,396	-		IAI47_16630	0.55	+2.0
3,524,414	+		IAI47_16630	0.60	-2.0
3,524,414	+		IAI47_16630	0.60	-1.0
3,524,414	+		IAI47_16630	0.60	+0.2
3,524,415	-		IAI47_16630	0.60	-0.5
3,524,415	-		IAI47_16630	0.60	+0.8
3,524,415	-		IAI47_16630	0.60	-0.1
3,524,415	-		IAI47_16630	0.60	+0.4
3,524,415	-		IAI47_16630	0.60	-0.2
3,524,418	+		IAI47_16630	0.61	-0.3
3,524,418	+		IAI47_16630	0.61	+0.5
3,524,418	+		IAI47_16630	0.61	-0.3
3,524,418	+		IAI47_16630	0.61	+0.2
3,524,419	-		IAI47_16630	0.62	+0.9
3,524,419	-		IAI47_16630	0.62	-0.6
3,524,419	-		IAI47_16630	0.62	-0.2
3,524,419	-		IAI47_16630	0.62	-0.9
3,524,432	+		IAI47_16630	0.66	-0.1
3,524,432	+		IAI47_16630	0.66	-1.1
3,524,432	+		IAI47_16630	0.66	-2.0
3,524,432	+		IAI47_16630	0.66	-0.6
3,524,433	-		IAI47_16630	0.66	+0.8
3,524,433	-		IAI47_16630	0.66	-0.4
3,524,433	-		IAI47_16630	0.66	-0.5
3,524,433	-		IAI47_16630	0.66	-0.7
3,524,433	-		IAI47_16630	0.66	-0.1
3,524,485	+		IAI47_16630	0.82	-0.2
3,524,486	-		IAI47_16630	0.83	-0.8
3,524,486	-		IAI47_16630	0.83	-0.8
3,524,486	-		IAI47_16630	0.83	-2.3
3,524,489	+		IAI47_16630	0.83	+1.4
3,524,489	+		IAI47_16630	0.83	-2.7
3,524,489	+		IAI47_16630	0.83	+1.0
3,524,489	+		IAI47_16630	0.83	-2.3
3,524,490	-		IAI47_16630	0.84	-0.0
3,524,490	-		IAI47_16630	0.84	-1.8
3,524,490	-		IAI47_16630	0.84	-1.8
3,524,490	-		IAI47_16630	0.84	-1.0
3,524,502	+		IAI47_16630	0.88	+1.1
3,524,502	+		IAI47_16630	0.88	+0.4
3,524,539	+				-0.1
3,524,549	-				-1.8
3,524,600	+				-0.7
3,524,601	-				+0.3
3,524,623	+				+0.6
3,524,648	-				-1.1
3,524,658	-				-1.0
3,524,659	+				+1.6
3,524,659	+				+0.8
3,524,660	-				-2.3
3,524,665	+				-0.4
3,524,694	+				-0.4
3,524,700	+				+0.0
3,524,700	+				-0.8
3,524,720	+				-0.3
3,524,720	+				+2.4
3,524,720	+				-1.0
3,524,721	-				+0.2
3,524,721	-				-0.1
3,524,727	+		IAI47_16635	0.12	-2.3
3,524,727	+		IAI47_16635	0.12	+0.4
3,524,727	+		IAI47_16635	0.12	+0.2
3,524,727	+		IAI47_16635	0.12	+1.4
3,524,727	+		IAI47_16635	0.12	+0.5
3,524,728	-		IAI47_16635	0.12	+0.8
3,524,728	-		IAI47_16635	0.12	+0.3
3,524,728	-		IAI47_16635	0.12	-2.2
3,524,728	-		IAI47_16635	0.12	-0.9
3,524,729	+		IAI47_16635	0.12	+0.7
3,524,729	+		IAI47_16635	0.12	+2.1
3,524,729	+		IAI47_16635	0.12	+0.2
3,524,729	+		IAI47_16635	0.12	+0.0
3,524,730	-		IAI47_16635	0.12	-2.2
3,524,730	-		IAI47_16635	0.12	-1.5
3,524,730	-		IAI47_16635	0.12	-1.4
3,524,732	+		IAI47_16635	0.13	+1.4
3,524,732	+		IAI47_16635	0.13	-0.2
3,524,732	+		IAI47_16635	0.13	+0.9
3,524,732	+		IAI47_16635	0.13	+0.3
3,524,732	+		IAI47_16635	0.13	+1.7
3,524,732	+		IAI47_16635	0.13	+0.8
3,524,732	+		IAI47_16635	0.13	+1.4
3,524,732	+		IAI47_16635	0.13	+1.4
3,524,732	+		IAI47_16635	0.13	-1.7
3,524,732	+		IAI47_16635	0.13	+2.5
3,524,733	-		IAI47_16635	0.13	-1.4
3,524,733	-		IAI47_16635	0.13	-0.6
3,524,733	-		IAI47_16635	0.13	-0.4
3,524,770	-		IAI47_16635	0.24	-1.4
3,524,799	+		IAI47_16635	0.32	-0.7
3,524,799	+		IAI47_16635	0.32	-0.6
3,524,799	+		IAI47_16635	0.32	+1.7
3,524,799	+		IAI47_16635	0.32	-0.6
3,524,799	+		IAI47_16635	0.32	+2.3
3,524,800	-		IAI47_16635	0.32	-1.3
3,524,800	-		IAI47_16635	0.32	-0.8
3,524,801	+		IAI47_16635	0.32	-1.2
3,524,802	-		IAI47_16635	0.33	-2.5
3,524,802	-		IAI47_16635	0.33	-0.5
3,524,802	-		IAI47_16635	0.33	-0.9
3,524,810	+		IAI47_16635	0.35	+0.7
3,524,810	+		IAI47_16635	0.35	-1.7
3,524,811	-		IAI47_16635	0.35	+2.0
3,524,811	-		IAI47_16635	0.35	-2.0
3,524,811	-		IAI47_16635	0.35	-1.8
3,524,829	+		IAI47_16635	0.40	+1.5
3,524,829	+		IAI47_16635	0.40	+1.0
3,524,833	+		IAI47_16635	0.42	+1.7
3,524,833	+		IAI47_16635	0.42	-0.9
3,524,833	+		IAI47_16635	0.42	+2.1
3,524,834	-		IAI47_16635	0.42	+0.7
3,524,834	-		IAI47_16635	0.42	-1.4
3,524,834	-		IAI47_16635	0.42	-0.2
3,524,834	-		IAI47_16635	0.42	-2.1
3,524,834	-		IAI47_16635	0.42	-0.2
3,524,834	-		IAI47_16635	0.42	-1.8
3,524,834	-		IAI47_16635	0.42	+0.8
3,524,834	-		IAI47_16635	0.42	-0.0
3,524,834	-		IAI47_16635	0.42	-3.1
3,524,834	-		IAI47_16635	0.42	-1.4
3,524,834	-		IAI47_16635	0.42	-2.3
3,524,834	-		IAI47_16635	0.42	-0.2
3,524,834	-		IAI47_16635	0.42	-0.2
3,524,834	-		IAI47_16635	0.42	-1.7
3,524,841	+		IAI47_16635	0.44	+1.9
3,524,841	+		IAI47_16635	0.44	+1.6
3,524,842	-		IAI47_16635	0.44	-3.3
3,524,842	-		IAI47_16635	0.44	-1.0
3,524,851	+		IAI47_16635	0.47	+0.6
3,524,851	+		IAI47_16635	0.47	+0.3
3,524,851	+		IAI47_16635	0.47	+0.2
3,524,851	+		IAI47_16635	0.47	-0.4
3,524,851	+		IAI47_16635	0.47	+2.0
3,524,852	-		IAI47_16635	0.47	+0.2
3,524,852	-		IAI47_16635	0.47	-3.0
3,524,852	-		IAI47_16635	0.47	-1.2
3,524,852	-		IAI47_16635	0.47	+0.7
3,524,868	+		IAI47_16635	0.51	-2.6
3,524,868	+		IAI47_16635	0.51	+0.3
3,524,873	+		IAI47_16635	0.53	+0.1
3,524,874	-		IAI47_16635	0.53	-1.0
3,524,881	+		IAI47_16635	0.55	-0.3
3,524,881	+		IAI47_16635	0.55	-0.3
3,524,881	+		IAI47_16635	0.55	-0.3
3,524,881	+		IAI47_16635	0.55	-0.5
3,524,881	+		IAI47_16635	0.55	+0.1
3,524,882	-		IAI47_16635	0.55	-0.1
3,524,882	-		IAI47_16635	0.55	-1.0
3,524,882	-		IAI47_16635	0.55	-1.1
3,524,882	-				+2.0
3,524,882	-		IAI47_16635	0.55	-0.6
3,524,882	-		IAI47_16635	0.55	-0.2
3,524,882	-		IAI47_16635	0.55	+1.4
3,524,883	+		IAI47_16635	0.56	+0.1
3,524,883	+		IAI47_16635	0.56	-0.3
3,524,884	-		IAI47_16635	0.56	+1.2
3,524,884	-		IAI47_16635	0.56	-0.1
3,524,911	-		IAI47_16635	0.64	-1.2
3,524,923	-		IAI47_16635	0.67	-1.9
3,524,923	-		IAI47_16635	0.67	-0.0
3,524,926	-		IAI47_16635	0.68	-0.8
3,524,926	-		IAI47_16635	0.68	-1.3
3,524,930	+		IAI47_16635	0.69	+0.2
3,524,931	-		IAI47_16635	0.69	+0.3
3,524,931	-		IAI47_16635	0.69	+0.0
3,524,931	-		IAI47_16635	0.69	-1.2
3,524,947	+		IAI47_16635	0.74	-0.5
3,524,947	+		IAI47_16635	0.74	-0.8
3,524,947	+		IAI47_16635	0.74	+1.5
3,524,951	+		IAI47_16635	0.75	-0.2
3,524,952	-		IAI47_16635	0.75	-1.4
3,524,952	-		IAI47_16635	0.75	-0.8
3,524,952	-		IAI47_16635	0.75	-1.1
3,524,968	-		IAI47_16635	0.80	-2.0
3,524,974	+		IAI47_16635	0.81	+1.5
3,524,974	+		IAI47_16635	0.81	-0.3
3,524,975	-		IAI47_16635	0.82	-0.3
3,524,978	+		IAI47_16635	0.82	+2.6
3,524,978	+		IAI47_16635	0.82	+0.5
3,524,978	+		IAI47_16635	0.82	-0.3
3,524,989	+		IAI47_16635	0.86	+1.5
3,524,989	+		IAI47_16635	0.86	+0.2
3,524,989	+		IAI47_16635	0.86	+1.0
3,524,990	-		IAI47_16635	0.86	+0.2
3,524,990	-		IAI47_16635	0.86	-0.8
3,524,990	-		IAI47_16635	0.86	-0.2
3,525,004	-				-1.0
3,525,026	-				-1.5
3,525,033	+				+0.0
3,525,033	+				+0.2
3,525,034	-				-1.2
3,525,034	-				-0.8
3,525,036	-				-1.0
3,525,037	+				-0.2
3,525,037	+				-2.0
3,525,037	+				+0.2
3,525,038	-				-1.3
3,525,038	-				-2.9
3,525,073	+				+2.7
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