Strain Fitness in Pantoea sp. MT58 around IAI47_08190

Experiment: Survival; Treatment=FW300 (pH7.4) with 5.0 mM Glucose; TreatmentDuration=24hrs; Outgrowth=LBkan50

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Survival; Treatment=FW300 (pH7.4) with 5.0 mM Glucose; TreatmentDuration=24hrs; Outgrowth=LBkan50
1,725,867	+		IAI47_08185	0.42	-0.7
1,725,868	-		IAI47_08185	0.42	-1.7
1,725,868	-		IAI47_08185	0.42	-2.3
1,725,868	-		IAI47_08185	0.42	+1.9
1,725,914	+		IAI47_08185	0.48	-0.5
1,725,914	+		IAI47_08185	0.48	-1.1
1,725,957	+		IAI47_08185	0.54	-0.7
1,725,957	+		IAI47_08185	0.54	-0.1
1,726,088	+		IAI47_08185	0.71	-0.2
1,726,089	-		IAI47_08185	0.72	-0.4
1,726,089	-		IAI47_08185	0.72	-0.6
1,726,134	+		IAI47_08185	0.78	-0.5
1,726,144	-		IAI47_08185	0.79	+0.6
1,726,144	-		IAI47_08185	0.79	-0.7
1,726,212	+		IAI47_08185	0.88	-0.9
1,726,212	+		IAI47_08185	0.88	-0.8
1,726,212	+		IAI47_08185	0.88	+1.3
1,726,212	+		IAI47_08185	0.88	-2.1
1,726,212	+		IAI47_08185	0.88	+0.1
1,726,213	-		IAI47_08185	0.88	+2.5
1,726,213	-		IAI47_08185	0.88	+0.6
1,726,249	-				+1.2
1,726,301	-				-1.3
1,726,331	+				+0.1
1,726,400	+				-0.7
1,726,400	+				-1.2
1,726,400	+				-1.6
1,726,401	-				-0.6
1,726,401	-				-0.8
1,726,404	+				-1.0
1,726,405	-				+0.1
1,726,409	-				+0.1
1,726,466	-				+0.3
1,726,466	-				-1.2
1,726,466	-				-0.2
1,726,495	+				+1.1
1,726,495	+				-1.2
1,726,496	-				-0.5
1,726,526	+				-0.7
1,726,527	-				+0.1
1,726,553	+				+0.3
1,726,557	-				-0.5
1,726,607	-				-0.7
1,726,610	+				-0.8
1,726,654	+				-0.3
1,726,654	+				-1.4
1,726,699	-				-0.8
1,726,699	-				-0.5
1,726,699	-				-0.4
1,726,699	-				-1.2
1,726,699	-				-0.2
1,726,746	-				-0.8
1,726,763	-				-0.4
1,726,789	+				-0.8
1,726,789	+				-1.1
1,726,802	+				+2.2
1,726,802	+				-0.8
1,726,803	-				-0.1
1,726,809	-				-0.4
1,726,822	+				-1.3
1,726,823	-				-0.9
1,726,878	+		IAI47_08190	0.11	-0.9
1,726,879	-		IAI47_08190	0.11	+1.2
1,726,879	-		IAI47_08190	0.11	-1.3
1,726,879	-		IAI47_08190	0.11	+0.0
1,726,915	+		IAI47_08190	0.14	-0.9
1,726,922	+		IAI47_08190	0.15	-2.5
1,726,923	-		IAI47_08190	0.15	-1.7
1,726,925	+		IAI47_08190	0.15	+0.7
1,726,946	+		IAI47_08190	0.17	-0.7
1,726,946	+		IAI47_08190	0.17	-1.2
1,726,946	+		IAI47_08190	0.17	+0.2
1,726,947	-		IAI47_08190	0.17	-1.9
1,727,030	+		IAI47_08190	0.25	+0.2
1,727,031	-		IAI47_08190	0.25	-0.5
1,727,031	-		IAI47_08190	0.25	+1.3
1,727,046	+		IAI47_08190	0.26	+0.8
1,727,046	+		IAI47_08190	0.26	-1.0
1,727,046	+		IAI47_08190	0.26	+1.4
1,727,047	-		IAI47_08190	0.26	+0.6
1,727,047	-		IAI47_08190	0.26	+0.5
1,727,052	+		IAI47_08190	0.27	+0.4
1,727,052	+		IAI47_08190	0.27	-0.3
1,727,052	+		IAI47_08190	0.27	-1.7
1,727,052	+		IAI47_08190	0.27	-0.1
1,727,054	+		IAI47_08190	0.27	+1.2
1,727,054	+		IAI47_08190	0.27	+0.1
1,727,054	+		IAI47_08190	0.27	+1.5
1,727,055	-		IAI47_08190	0.27	+0.9
1,727,055	-		IAI47_08190	0.27	+0.3
1,727,059	+		IAI47_08190	0.27	-0.3
1,727,069	+		IAI47_08190	0.28	-0.4
1,727,069	+		IAI47_08190	0.28	+0.6
1,727,090	-		IAI47_08190	0.30	-0.9
1,727,090	-		IAI47_08190	0.30	-0.0
1,727,090	-		IAI47_08190	0.30	+1.6
1,727,108	+		IAI47_08190	0.32	+0.2
1,727,145	+		IAI47_08190	0.35	+1.1
1,727,183	+		IAI47_08190	0.39	+1.4
1,727,183	+		IAI47_08190	0.39	-1.1
1,727,184	-		IAI47_08190	0.39	-0.2
1,727,195	+		IAI47_08190	0.40	+1.6
1,727,195	+		IAI47_08190	0.40	-0.1
1,727,195	+		IAI47_08190	0.40	-0.4
1,727,196	-		IAI47_08190	0.40	+2.1
1,727,196	-		IAI47_08190	0.40	-1.1
1,727,196	-		IAI47_08190	0.40	-1.1
1,727,196	-		IAI47_08190	0.40	+1.6
1,727,196	-		IAI47_08190	0.40	+1.1
1,727,196	-		IAI47_08190	0.40	-0.8
1,727,196	-		IAI47_08190	0.40	+3.4
1,727,205	+		IAI47_08190	0.41	+0.3
1,727,206	-		IAI47_08190	0.41	-1.7
1,727,206	-		IAI47_08190	0.41	-0.7
1,727,206	-		IAI47_08190	0.41	+0.3
1,727,212	-		IAI47_08190	0.42	+0.8
1,727,227	-		IAI47_08190	0.43	-1.1
1,727,256	+		IAI47_08190	0.46	-0.2
1,727,257	-		IAI47_08190	0.46	+0.8
1,727,257	-		IAI47_08190	0.46	-0.7
1,727,258	+		IAI47_08190	0.46	+1.6
1,727,258	+		IAI47_08190	0.46	+0.5
1,727,259	-		IAI47_08190	0.46	-0.8
1,727,259	-		IAI47_08190	0.46	+0.5
1,727,259	-		IAI47_08190	0.46	+0.1
1,727,349	+		IAI47_08190	0.54	-0.3
1,727,368	+		IAI47_08190	0.56	+0.2
1,727,368	+		IAI47_08190	0.56	-1.9
1,727,368	+		IAI47_08190	0.56	+1.3
1,727,369	-		IAI47_08190	0.56	-1.3
1,727,369	-		IAI47_08190	0.56	-1.9
1,727,503	+		IAI47_08190	0.69	+0.8
1,727,503	+		IAI47_08190	0.69	-0.0
1,727,504	-		IAI47_08190	0.69	-0.4
1,727,523	-		IAI47_08190	0.70	-0.9
1,727,565	+		IAI47_08190	0.74	+0.5
1,727,588	+		IAI47_08190	0.77	-1.1
1,727,589	-		IAI47_08190	0.77	-0.3
1,727,589	-		IAI47_08190	0.77	-1.4
1,727,589	-		IAI47_08190	0.77	-0.9
1,727,601	+		IAI47_08190	0.78	-0.4
1,727,601	+		IAI47_08190	0.78	-0.8
1,727,601	+		IAI47_08190	0.78	-0.5
1,727,601	+		IAI47_08190	0.78	-0.4
1,727,601	+		IAI47_08190	0.78	-0.4
1,727,602	-		IAI47_08190	0.78	+0.5
1,727,602	-		IAI47_08190	0.78	+0.1
1,727,615	+		IAI47_08190	0.79	+0.3
1,727,615	+		IAI47_08190	0.79	-2.6
1,727,615	+		IAI47_08190	0.79	-0.6
1,727,615	+		IAI47_08190	0.79	+0.4
1,727,615	+		IAI47_08190	0.79	-0.7
1,727,616	-		IAI47_08190	0.79	-1.2
1,727,636	+		IAI47_08190	0.81	+0.2
1,727,636	+		IAI47_08190	0.81	+1.5
1,727,637	-		IAI47_08190	0.81	-0.9
1,727,637	-		IAI47_08190	0.81	-0.9
1,727,725	+		IAI47_08190	0.89	+1.2
1,727,800	+				+0.5
1,727,800	+				+0.1
1,727,800	+				+0.1
1,727,801	-				-0.5
1,727,801	-				-0.2
1,727,801	-				-2.4
1,727,870	-				+0.4
1,728,149	-				-0.5
1,728,704	-				+2.6