Experiment: adipate (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt H281DRAFT_06568 and H281DRAFT_06569 are separated by 961 nucleotides H281DRAFT_06569 and H281DRAFT_06570 are separated by 739 nucleotides
H281DRAFT_06568: H281DRAFT_06568 - DNA-binding protein H-NS, at 8,696 to 8,980
_06568
H281DRAFT_06569: H281DRAFT_06569 - hypothetical protein, at 9,942 to 10,133
_06569
H281DRAFT_06570: H281DRAFT_06570 - hypothetical protein, at 10,873 to 11,676
_06570
Position (kb)
9
10
11 Strain fitness (log2 ratio)
-4
-3
-2
-1
0
1 at 8.960 kb on + strand at 8.960 kb on + strand at 8.961 kb on - strand at 8.961 kb on - strand at 8.971 kb on - strand at 9.016 kb on + strand at 9.016 kb on + strand at 9.016 kb on + strand at 9.017 kb on - strand at 9.095 kb on + strand at 9.095 kb on + strand at 9.195 kb on - strand at 9.220 kb on + strand at 9.288 kb on + strand at 9.288 kb on + strand at 9.288 kb on + strand at 9.288 kb on + strand at 9.288 kb on + strand at 9.289 kb on - strand at 9.412 kb on + strand at 9.413 kb on - strand at 9.426 kb on - strand at 9.511 kb on + strand at 9.512 kb on - strand at 9.565 kb on + strand at 9.680 kb on + strand at 9.680 kb on + strand at 9.680 kb on + strand at 9.681 kb on - strand at 9.681 kb on - strand at 9.681 kb on - strand at 9.685 kb on + strand at 9.713 kb on + strand at 9.714 kb on - strand at 9.714 kb on - strand at 9.714 kb on - strand at 9.834 kb on + strand at 9.857 kb on + strand at 10.009 kb on + strand, within H281DRAFT_06569 at 10.009 kb on + strand, within H281DRAFT_06569 at 10.010 kb on - strand, within H281DRAFT_06569 at 10.044 kb on + strand, within H281DRAFT_06569 at 10.045 kb on - strand, within H281DRAFT_06569 at 10.101 kb on + strand, within H281DRAFT_06569 at 10.101 kb on + strand, within H281DRAFT_06569 at 10.101 kb on + strand, within H281DRAFT_06569 at 10.207 kb on + strand at 10.208 kb on - strand at 10.245 kb on + strand at 10.283 kb on + strand at 10.284 kb on - strand at 10.289 kb on - strand at 10.394 kb on + strand at 10.540 kb on - strand at 10.540 kb on - strand at 10.571 kb on + strand at 10.650 kb on + strand at 10.650 kb on + strand at 10.651 kb on - strand at 10.651 kb on - strand at 10.651 kb on - strand at 10.910 kb on + strand at 10.910 kb on + strand at 10.974 kb on + strand, within H281DRAFT_06570 at 10.978 kb on + strand, within H281DRAFT_06570 at 10.978 kb on + strand, within H281DRAFT_06570 at 10.978 kb on + strand, within H281DRAFT_06570 at 10.978 kb on + strand, within H281DRAFT_06570 at 10.979 kb on - strand, within H281DRAFT_06570 at 11.002 kb on + strand, within H281DRAFT_06570 at 11.004 kb on + strand, within H281DRAFT_06570 at 11.131 kb on + strand, within H281DRAFT_06570
Per-strain Table
Position Strand Gene LocusTag Fraction adipate (C) remove 8,960 + -0.0 8,960 + +0.2 8,961 - +0.6 8,961 - -0.2 8,971 - -3.2 9,016 + +0.9 9,016 + -0.8 9,016 + +0.3 9,017 - +0.1 9,095 + +0.4 9,095 + -1.9 9,195 - -3.3 9,220 + +0.1 9,288 + +0.4 9,288 + -0.9 9,288 + -4.1 9,288 + -0.5 9,288 + +1.3 9,289 - -0.2 9,412 + -0.9 9,413 - +0.5 9,426 - +0.3 9,511 + -2.0 9,512 - -1.2 9,565 + -0.8 9,680 + +0.4 9,680 + -0.8 9,680 + -0.3 9,681 - -1.2 9,681 - -0.5 9,681 - +0.0 9,685 + +0.1 9,713 + +1.6 9,714 - +0.4 9,714 - -0.3 9,714 - -1.6 9,834 + -1.3 9,857 + +0.7 10,009 + H281DRAFT_06569 0.35 +0.1 10,009 + H281DRAFT_06569 0.35 +0.2 10,010 - H281DRAFT_06569 0.35 +0.5 10,044 + H281DRAFT_06569 0.53 -0.9 10,045 - H281DRAFT_06569 0.54 -3.8 10,101 + H281DRAFT_06569 0.83 -0.9 10,101 + H281DRAFT_06569 0.83 -0.3 10,101 + H281DRAFT_06569 0.83 -0.9 10,207 + +0.2 10,208 - +1.0 10,245 + +0.7 10,283 + -0.5 10,284 - -1.1 10,289 - -3.6 10,394 + -1.7 10,540 - +0.3 10,540 - +0.3 10,571 + -0.5 10,650 + -0.5 10,650 + +0.4 10,651 - -0.6 10,651 - -0.0 10,651 - +1.0 10,910 + +0.0 10,910 + +0.0 10,974 + H281DRAFT_06570 0.13 +1.2 10,978 + H281DRAFT_06570 0.13 +0.7 10,978 + H281DRAFT_06570 0.13 -0.8 10,978 + H281DRAFT_06570 0.13 -0.1 10,978 + H281DRAFT_06570 0.13 +0.5 10,979 - H281DRAFT_06570 0.13 -0.8 11,002 + H281DRAFT_06570 0.16 -0.0 11,004 + H281DRAFT_06570 0.16 +0.6 11,131 + H281DRAFT_06570 0.32 +0.6
Or see this region's nucleotide sequence