Experiment: adipate (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt H281DRAFT_06087 and H281DRAFT_06088 are separated by 245 nucleotides H281DRAFT_06088 and H281DRAFT_06089 are separated by 191 nucleotides H281DRAFT_06089 and H281DRAFT_06090 are separated by 391 nucleotides
H281DRAFT_06087: H281DRAFT_06087 - Uncharacterized membrane protein, at 105,316 to 105,846
_06087
H281DRAFT_06088: H281DRAFT_06088 - Nucleoside-diphosphate-sugar epimerase, at 106,092 to 106,730
_06088
H281DRAFT_06089: H281DRAFT_06089 - hypothetical protein, at 106,922 to 107,164
_06089
H281DRAFT_06090: H281DRAFT_06090 - N-ethylmaleimide reductase, at 107,556 to 108,770
_06090
Position (kb) 106
107 Strain fitness (log2 ratio) -1
0
1 at 105.276 kb on - strand at 105.455 kb on + strand, within H281DRAFT_06087 at 105.628 kb on + strand, within H281DRAFT_06087 at 105.761 kb on + strand, within H281DRAFT_06087 at 106.135 kb on + strand at 106.283 kb on + strand, within H281DRAFT_06088 at 106.284 kb on - strand, within H281DRAFT_06088 at 106.465 kb on - strand, within H281DRAFT_06088 at 106.519 kb on - strand, within H281DRAFT_06088 at 106.548 kb on - strand, within H281DRAFT_06088 at 106.848 kb on - strand at 106.996 kb on + strand, within H281DRAFT_06089 at 107.229 kb on + strand at 107.230 kb on - strand at 107.230 kb on - strand at 107.290 kb on - strand at 107.451 kb on + strand at 107.452 kb on - strand at 107.461 kb on - strand at 107.649 kb on + strand at 107.650 kb on - strand at 107.716 kb on + strand, within H281DRAFT_06090 at 107.717 kb on - strand, within H281DRAFT_06090
Per-strain Table
Position Strand Gene LocusTag Fraction adipate (C) remove 105,276 - -0.7 105,455 + H281DRAFT_06087 0.26 +0.3 105,628 + H281DRAFT_06087 0.59 +1.5 105,761 + H281DRAFT_06087 0.84 +1.3 106,135 + -0.1 106,283 + H281DRAFT_06088 0.30 +0.5 106,284 - H281DRAFT_06088 0.30 +1.5 106,465 - H281DRAFT_06088 0.58 +0.4 106,519 - H281DRAFT_06088 0.67 +0.3 106,548 - H281DRAFT_06088 0.71 +0.5 106,848 - -1.5 106,996 + H281DRAFT_06089 0.30 +0.3 107,229 + -0.2 107,230 - +0.6 107,230 - +0.9 107,290 - -0.9 107,451 + +0.5 107,452 - +0.1 107,461 - -0.9 107,649 + -0.5 107,650 - +0.3 107,716 + H281DRAFT_06090 0.13 +0.4 107,717 - H281DRAFT_06090 0.13 +1.3
Or see this region's nucleotide sequence