Experiment: adipate (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt H281DRAFT_04923 and H281DRAFT_04924 are separated by 46 nucleotides H281DRAFT_04924 and H281DRAFT_04925 are separated by 207 nucleotides
H281DRAFT_04923: H281DRAFT_04923 - iron complex transport system substrate-binding protein, at 86,879 to 87,841
_04923
H281DRAFT_04924: H281DRAFT_04924 - iron complex outermembrane recepter protein, at 87,888 to 90,080
_04924
H281DRAFT_04925: H281DRAFT_04925 - non-ribosomal peptide synthase domain TIGR01720/amino acid adenylation domain-containing protein, at 90,288 to 104,615
_04925
Position (kb) 87
88
89
90
91 Strain fitness (log2 ratio) -2
-1
0
1
2 at 87.230 kb on + strand, within H281DRAFT_04923 at 87.231 kb on - strand, within H281DRAFT_04923 at 87.234 kb on - strand, within H281DRAFT_04923 at 87.238 kb on - strand, within H281DRAFT_04923 at 87.970 kb on + strand at 88.027 kb on + strand at 88.051 kb on - strand at 88.105 kb on + strand at 88.619 kb on - strand, within H281DRAFT_04924 at 88.954 kb on + strand, within H281DRAFT_04924 at 88.992 kb on - strand, within H281DRAFT_04924 at 89.033 kb on - strand, within H281DRAFT_04924 at 89.509 kb on + strand, within H281DRAFT_04924 at 89.509 kb on + strand, within H281DRAFT_04924 at 89.542 kb on + strand, within H281DRAFT_04924 at 89.729 kb on + strand, within H281DRAFT_04924 at 89.864 kb on - strand at 90.010 kb on + strand at 90.011 kb on - strand at 90.206 kb on + strand at 90.932 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction adipate (C) remove 87,230 + H281DRAFT_04923 0.36 +0.6 87,231 - H281DRAFT_04923 0.37 -1.0 87,234 - H281DRAFT_04923 0.37 +0.3 87,238 - H281DRAFT_04923 0.37 -0.6 87,970 + +0.5 88,027 + -1.7 88,051 - +0.4 88,105 + +1.2 88,619 - H281DRAFT_04924 0.33 +0.6 88,954 + H281DRAFT_04924 0.49 +0.9 88,992 - H281DRAFT_04924 0.50 +0.9 89,033 - H281DRAFT_04924 0.52 -2.5 89,509 + H281DRAFT_04924 0.74 +1.2 89,509 + H281DRAFT_04924 0.74 -1.4 89,542 + H281DRAFT_04924 0.75 +1.5 89,729 + H281DRAFT_04924 0.84 +2.3 89,864 - +0.6 90,010 + -1.9 90,011 - +0.5 90,206 + +0.4 90,932 - +0.6
Or see this region's nucleotide sequence