Experiment: adipate (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt H281DRAFT_02712 and H281DRAFT_02713 overlap by 1 nucleotides H281DRAFT_02713 and H281DRAFT_02714 are separated by 39 nucleotides H281DRAFT_02714 and H281DRAFT_02715 are separated by 244 nucleotides
H281DRAFT_02712: H281DRAFT_02712 - monosaccharide ABC transporter ATP-binding protein, CUT2 family, at 295,276 to 296,793
_02712
H281DRAFT_02713: H281DRAFT_02713 - monosaccharide ABC transporter substrate-binding protein, CUT2 family, at 296,793 to 297,734
_02713
H281DRAFT_02714: H281DRAFT_02714 - monosaccharide ABC transporter membrane protein, CUT2 family, at 297,774 to 298,769
_02714
H281DRAFT_02715: H281DRAFT_02715 - Nucleoside-diphosphate-sugar epimerase, at 299,014 to 299,913
_02715
Position (kb) 297
298
299 Strain fitness (log2 ratio) -2
-1
0
1
2
3
4 at 296.783 kb on - strand at 296.783 kb on - strand at 296.804 kb on - strand at 296.814 kb on - strand at 296.814 kb on - strand at 296.950 kb on + strand, within H281DRAFT_02713 at 296.950 kb on + strand, within H281DRAFT_02713 at 296.951 kb on - strand, within H281DRAFT_02713 at 297.350 kb on - strand, within H281DRAFT_02713 at 297.350 kb on - strand, within H281DRAFT_02713 at 297.350 kb on - strand, within H281DRAFT_02713 at 297.350 kb on - strand, within H281DRAFT_02713 at 297.350 kb on - strand, within H281DRAFT_02713 at 297.350 kb on - strand, within H281DRAFT_02713 at 297.508 kb on - strand, within H281DRAFT_02713 at 297.645 kb on - strand at 297.775 kb on + strand at 297.828 kb on + strand at 297.829 kb on - strand at 297.860 kb on + strand at 297.890 kb on + strand, within H281DRAFT_02714 at 298.084 kb on + strand, within H281DRAFT_02714 at 298.085 kb on - strand, within H281DRAFT_02714 at 298.085 kb on - strand, within H281DRAFT_02714 at 298.162 kb on + strand, within H281DRAFT_02714 at 298.252 kb on + strand, within H281DRAFT_02714 at 298.253 kb on - strand, within H281DRAFT_02714 at 298.313 kb on + strand, within H281DRAFT_02714 at 298.314 kb on - strand, within H281DRAFT_02714 at 298.321 kb on + strand, within H281DRAFT_02714 at 298.321 kb on + strand, within H281DRAFT_02714 at 298.321 kb on + strand, within H281DRAFT_02714 at 298.322 kb on - strand, within H281DRAFT_02714 at 298.322 kb on - strand, within H281DRAFT_02714 at 298.630 kb on + strand, within H281DRAFT_02714 at 298.631 kb on - strand, within H281DRAFT_02714 at 298.631 kb on - strand, within H281DRAFT_02714 at 298.631 kb on - strand, within H281DRAFT_02714 at 298.758 kb on + strand at 298.868 kb on - strand at 298.906 kb on + strand at 298.907 kb on - strand at 299.067 kb on - strand at 299.069 kb on + strand at 299.329 kb on + strand, within H281DRAFT_02715 at 299.329 kb on + strand, within H281DRAFT_02715 at 299.329 kb on + strand, within H281DRAFT_02715 at 299.330 kb on - strand, within H281DRAFT_02715 at 299.399 kb on - strand, within H281DRAFT_02715 at 299.482 kb on + strand, within H281DRAFT_02715 at 299.483 kb on - strand, within H281DRAFT_02715 at 299.483 kb on - strand, within H281DRAFT_02715 at 299.548 kb on - strand, within H281DRAFT_02715 at 299.552 kb on - strand, within H281DRAFT_02715 at 299.573 kb on + strand, within H281DRAFT_02715 at 299.650 kb on + strand, within H281DRAFT_02715 at 299.651 kb on - strand, within H281DRAFT_02715 at 299.651 kb on - strand, within H281DRAFT_02715
Per-strain Table
Position Strand Gene LocusTag Fraction adipate (C) remove 296,783 - -0.8 296,783 - -1.6 296,804 - +0.3 296,814 - +0.3 296,814 - -1.0 296,950 + H281DRAFT_02713 0.17 -0.9 296,950 + H281DRAFT_02713 0.17 -0.5 296,951 - H281DRAFT_02713 0.17 +0.4 297,350 - H281DRAFT_02713 0.59 -0.8 297,350 - H281DRAFT_02713 0.59 -0.1 297,350 - H281DRAFT_02713 0.59 -1.3 297,350 - H281DRAFT_02713 0.59 -0.1 297,350 - H281DRAFT_02713 0.59 -0.1 297,350 - H281DRAFT_02713 0.59 +0.8 297,508 - H281DRAFT_02713 0.76 +0.1 297,645 - -0.2 297,775 + +0.7 297,828 + +0.5 297,829 - +1.0 297,860 + +0.8 297,890 + H281DRAFT_02714 0.12 -1.4 298,084 + H281DRAFT_02714 0.31 -2.4 298,085 - H281DRAFT_02714 0.31 +0.2 298,085 - H281DRAFT_02714 0.31 -1.8 298,162 + H281DRAFT_02714 0.39 -0.5 298,252 + H281DRAFT_02714 0.48 +0.2 298,253 - H281DRAFT_02714 0.48 -1.1 298,313 + H281DRAFT_02714 0.54 +1.2 298,314 - H281DRAFT_02714 0.54 +0.3 298,321 + H281DRAFT_02714 0.55 -0.6 298,321 + H281DRAFT_02714 0.55 -0.8 298,321 + H281DRAFT_02714 0.55 +0.2 298,322 - H281DRAFT_02714 0.55 -0.2 298,322 - H281DRAFT_02714 0.55 +0.3 298,630 + H281DRAFT_02714 0.86 +0.1 298,631 - H281DRAFT_02714 0.86 -1.1 298,631 - H281DRAFT_02714 0.86 +1.1 298,631 - H281DRAFT_02714 0.86 +0.4 298,758 + +0.4 298,868 - -0.9 298,906 + +4.4 298,907 - -1.2 299,067 - -0.3 299,069 + -0.8 299,329 + H281DRAFT_02715 0.35 +0.6 299,329 + H281DRAFT_02715 0.35 +0.5 299,329 + H281DRAFT_02715 0.35 -0.7 299,330 - H281DRAFT_02715 0.35 -0.4 299,399 - H281DRAFT_02715 0.43 +0.7 299,482 + H281DRAFT_02715 0.52 -0.1 299,483 - H281DRAFT_02715 0.52 +1.5 299,483 - H281DRAFT_02715 0.52 -0.4 299,548 - H281DRAFT_02715 0.59 -1.4 299,552 - H281DRAFT_02715 0.60 +0.5 299,573 + H281DRAFT_02715 0.62 -0.1 299,650 + H281DRAFT_02715 0.71 +0.4 299,651 - H281DRAFT_02715 0.71 -0.0 299,651 - H281DRAFT_02715 0.71 -0.0
Or see this region's nucleotide sequence