Experiment: adipate (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt H281DRAFT_02175 and H281DRAFT_02176 are separated by 19 nucleotides H281DRAFT_02176 and H281DRAFT_02177 are separated by 577 nucleotides
H281DRAFT_02175: H281DRAFT_02175 - monosaccharide ABC transporter membrane protein, CUT2 family, at 316,222 to 317,283
_02175
H281DRAFT_02176: H281DRAFT_02176 - monosaccharide ABC transporter membrane protein, CUT2 family, at 317,303 to 318,268
_02176
H281DRAFT_02177: H281DRAFT_02177 - ferredoxin--NADP+ reductase, at 318,846 to 319,616
_02177
Position (kb) 317
318
319 Strain fitness (log2 ratio) -5
-4
-3
-2
-1
0
1 at 316.683 kb on - strand, within H281DRAFT_02175 at 316.683 kb on - strand, within H281DRAFT_02175 at 316.887 kb on + strand, within H281DRAFT_02175 at 316.887 kb on + strand, within H281DRAFT_02175 at 316.888 kb on - strand at 316.888 kb on - strand, within H281DRAFT_02175 at 316.906 kb on + strand, within H281DRAFT_02175 at 316.942 kb on + strand, within H281DRAFT_02175 at 316.942 kb on + strand, within H281DRAFT_02175 at 316.943 kb on - strand, within H281DRAFT_02175 at 316.943 kb on - strand, within H281DRAFT_02175 at 316.985 kb on - strand, within H281DRAFT_02175 at 316.985 kb on - strand, within H281DRAFT_02175 at 317.038 kb on - strand at 317.186 kb on - strand at 317.244 kb on + strand at 317.245 kb on - strand at 317.260 kb on + strand at 317.260 kb on + strand at 317.261 kb on - strand at 317.388 kb on - strand at 317.411 kb on + strand, within H281DRAFT_02176 at 317.411 kb on + strand, within H281DRAFT_02176 at 317.411 kb on + strand, within H281DRAFT_02176 at 317.412 kb on - strand, within H281DRAFT_02176 at 317.412 kb on - strand, within H281DRAFT_02176 at 317.815 kb on + strand, within H281DRAFT_02176 at 317.912 kb on + strand, within H281DRAFT_02176 at 317.912 kb on + strand, within H281DRAFT_02176 at 317.913 kb on - strand, within H281DRAFT_02176 at 318.352 kb on - strand at 318.364 kb on + strand at 318.364 kb on + strand at 318.395 kb on - strand at 318.425 kb on + strand at 318.541 kb on + strand at 318.541 kb on + strand at 318.541 kb on + strand at 318.541 kb on + strand at 318.541 kb on + strand at 318.541 kb on + strand at 318.541 kb on + strand at 318.542 kb on - strand at 318.542 kb on - strand at 318.542 kb on - strand at 318.542 kb on - strand at 318.629 kb on - strand at 318.629 kb on - strand at 318.683 kb on - strand at 318.697 kb on - strand at 318.738 kb on + strand at 318.738 kb on + strand
Per-strain Table
Position Strand Gene LocusTag Fraction adipate (C) remove 316,683 - H281DRAFT_02175 0.43 +0.5 316,683 - H281DRAFT_02175 0.43 +1.5 316,887 + H281DRAFT_02175 0.63 +0.9 316,887 + H281DRAFT_02175 0.63 +0.1 316,888 - -1.3 316,888 - H281DRAFT_02175 0.63 +0.3 316,906 + H281DRAFT_02175 0.64 +0.0 316,942 + H281DRAFT_02175 0.68 -0.3 316,942 + H281DRAFT_02175 0.68 -0.7 316,943 - H281DRAFT_02175 0.68 +1.4 316,943 - H281DRAFT_02175 0.68 -0.6 316,985 - H281DRAFT_02175 0.72 +0.7 316,985 - H281DRAFT_02175 0.72 +0.0 317,038 - +0.9 317,186 - -1.1 317,244 + +1.3 317,245 - -0.2 317,260 + +0.7 317,260 + +0.1 317,261 - +0.3 317,388 - -0.4 317,411 + H281DRAFT_02176 0.11 +1.7 317,411 + H281DRAFT_02176 0.11 +0.1 317,411 + H281DRAFT_02176 0.11 +0.9 317,412 - H281DRAFT_02176 0.11 +1.1 317,412 - H281DRAFT_02176 0.11 +0.9 317,815 + H281DRAFT_02176 0.53 +0.7 317,912 + H281DRAFT_02176 0.63 +0.6 317,912 + H281DRAFT_02176 0.63 +0.7 317,913 - H281DRAFT_02176 0.63 +0.1 318,352 - -1.8 318,364 + -0.9 318,364 + +0.2 318,395 - +0.6 318,425 + -0.7 318,541 + +0.7 318,541 + +1.7 318,541 + +0.0 318,541 + +0.8 318,541 + +0.9 318,541 + +0.9 318,541 + -0.1 318,542 - -5.1 318,542 - -0.0 318,542 - -1.4 318,542 - -0.7 318,629 - -2.7 318,629 - -2.4 318,683 - -0.5 318,697 - -4.3 318,738 + -0.9 318,738 + +1.0
Or see this region's nucleotide sequence