Experiment: adipate (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt H281DRAFT_01285 and H281DRAFT_01286 are separated by 60 nucleotides H281DRAFT_01286 and H281DRAFT_01287 overlap by 4 nucleotides H281DRAFT_01287 and H281DRAFT_01288 overlap by 4 nucleotides
H281DRAFT_01285: H281DRAFT_01285 - ATP adenylyltransferase, at 123,461 to 124,405
_01285
H281DRAFT_01286: H281DRAFT_01286 - mxaL protein, at 124,466 to 125,500
_01286
H281DRAFT_01287: H281DRAFT_01287 - mxaK protein, at 125,497 to 126,066
_01287
H281DRAFT_01288: H281DRAFT_01288 - mxaC protein, at 126,063 to 127,052
_01288
Position (kb) 124
125
126 Strain fitness (log2 ratio) -3
-2
-1
0
1 at 123.585 kb on + strand, within H281DRAFT_01285 at 123.602 kb on - strand, within H281DRAFT_01285 at 123.960 kb on + strand, within H281DRAFT_01285 at 124.220 kb on + strand, within H281DRAFT_01285 at 124.221 kb on - strand, within H281DRAFT_01285 at 124.221 kb on - strand, within H281DRAFT_01285 at 124.468 kb on - strand at 124.468 kb on - strand at 124.532 kb on - strand at 125.112 kb on + strand, within H281DRAFT_01286 at 125.170 kb on - strand, within H281DRAFT_01286 at 125.373 kb on + strand, within H281DRAFT_01286 at 125.374 kb on - strand, within H281DRAFT_01286 at 125.374 kb on - strand, within H281DRAFT_01286 at 126.000 kb on - strand, within H281DRAFT_01287 at 126.046 kb on - strand at 126.046 kb on - strand at 126.046 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction adipate (C) remove 123,585 + H281DRAFT_01285 0.13 +0.8 123,602 - H281DRAFT_01285 0.15 +0.3 123,960 + H281DRAFT_01285 0.53 -0.6 124,220 + H281DRAFT_01285 0.80 +0.1 124,221 - H281DRAFT_01285 0.80 +0.6 124,221 - H281DRAFT_01285 0.80 +0.6 124,468 - +1.6 124,468 - -0.4 124,532 - -0.2 125,112 + H281DRAFT_01286 0.62 +0.2 125,170 - H281DRAFT_01286 0.68 -2.4 125,373 + H281DRAFT_01286 0.88 +0.9 125,374 - H281DRAFT_01286 0.88 +0.6 125,374 - H281DRAFT_01286 0.88 -3.2 126,000 - H281DRAFT_01287 0.88 +0.2 126,046 - -0.3 126,046 - -0.8 126,046 - +0.2
Or see this region's nucleotide sequence