Experiment: adipate (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt H281DRAFT_00713 and H281DRAFT_00714 are separated by 64 nucleotides H281DRAFT_00714 and H281DRAFT_00715 are separated by 63 nucleotides H281DRAFT_00715 and H281DRAFT_00716 are separated by 167 nucleotides
H281DRAFT_00713: H281DRAFT_00713 - 23S rRNA Gm-2251 2'-O-methyltransferase, at 801,814 to 802,557
_00713
H281DRAFT_00714: H281DRAFT_00714 - ribose-5-phosphate isomerase, at 802,622 to 803,317
_00714
H281DRAFT_00715: H281DRAFT_00715 - Glycosyltransferase involved in cell wall bisynthesis, at 803,381 to 804,709
_00715
H281DRAFT_00716: H281DRAFT_00716 - Glycosyltransferase involved in cell wall bisynthesis, at 804,877 to 806,094
_00716
Position (kb) 803
804
805 Strain fitness (log2 ratio) -4
-3
-2
-1
0
1 at 802.555 kb on + strand at 803.461 kb on - strand at 804.045 kb on + strand, within H281DRAFT_00715 at 804.287 kb on + strand, within H281DRAFT_00715 at 804.288 kb on - strand, within H281DRAFT_00715 at 804.830 kb on + strand at 805.078 kb on + strand, within H281DRAFT_00716 at 805.078 kb on + strand, within H281DRAFT_00716 at 805.137 kb on + strand, within H281DRAFT_00716 at 805.247 kb on - strand, within H281DRAFT_00716
Per-strain Table
Position Strand Gene LocusTag Fraction adipate (C) remove 802,555 + +0.1 803,461 - -1.9 804,045 + H281DRAFT_00715 0.50 +0.7 804,287 + H281DRAFT_00715 0.68 -3.9 804,288 - H281DRAFT_00715 0.68 -0.9 804,830 + +1.7 805,078 + H281DRAFT_00716 0.17 +1.1 805,078 + H281DRAFT_00716 0.17 +0.4 805,137 + H281DRAFT_00716 0.21 +0.5 805,247 - H281DRAFT_00716 0.30 -1.0
Or see this region's nucleotide sequence