Experiment: adipate (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt H281DRAFT_00128 and H281DRAFT_00129 are separated by 113 nucleotides H281DRAFT_00129 and H281DRAFT_00130 are separated by 88 nucleotides
H281DRAFT_00128: H281DRAFT_00128 - transcriptional regulator, LysR family, at 135,841 to 136,830
_00128
H281DRAFT_00129: H281DRAFT_00129 - phosphatidylglycerol:prolipoprotein diacylglycerol transferase, at 136,944 to 137,843
_00129
H281DRAFT_00130: H281DRAFT_00130 - Predicted secreted protein, at 137,932 to 138,660
_00130
Position (kb) 136
137
138 Strain fitness (log2 ratio) -4
-3
-2
-1
0
1
2
3 at 136.162 kb on + strand, within H281DRAFT_00128 at 136.162 kb on + strand, within H281DRAFT_00128 at 136.163 kb on - strand, within H281DRAFT_00128 at 136.526 kb on - strand, within H281DRAFT_00128 at 136.537 kb on - strand, within H281DRAFT_00128 at 136.546 kb on + strand, within H281DRAFT_00128 at 136.660 kb on - strand, within H281DRAFT_00128 at 136.828 kb on + strand at 136.828 kb on + strand at 136.828 kb on + strand at 136.828 kb on + strand at 136.832 kb on + strand at 136.897 kb on + strand at 136.903 kb on + strand at 136.910 kb on + strand at 136.910 kb on + strand at 136.910 kb on + strand at 138.072 kb on + strand, within H281DRAFT_00130 at 138.444 kb on + strand, within H281DRAFT_00130 at 138.744 kb on + strand at 138.774 kb on + strand
Per-strain Table
Position Strand Gene LocusTag Fraction adipate (C) remove 136,162 + H281DRAFT_00128 0.32 -0.2 136,162 + H281DRAFT_00128 0.32 +0.5 136,163 - H281DRAFT_00128 0.33 +0.7 136,526 - H281DRAFT_00128 0.69 -0.3 136,537 - H281DRAFT_00128 0.70 +0.2 136,546 + H281DRAFT_00128 0.71 -0.7 136,660 - H281DRAFT_00128 0.83 -3.9 136,828 + -0.5 136,828 + -1.1 136,828 + +0.2 136,828 + -2.4 136,832 + +0.5 136,897 + +0.1 136,903 + +1.2 136,910 + +0.1 136,910 + -0.1 136,910 + -0.1 138,072 + H281DRAFT_00130 0.19 +3.0 138,444 + H281DRAFT_00130 0.70 -0.5 138,744 + +1.3 138,774 + -1.8
Or see this region's nucleotide sequence