Experiment: Pyruvate-Sulfite (60-20mM) with Selenate 750uM
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt DVU0650 and DVU0651 are separated by 626 nucleotides DVU0651 and cheV-2 are separated by 139 nucleotides
DVU0650: DVU0650 - chelatase, putative (TIGR), at 720,601 to 721,494
DVU0650
DVU0651: DVU0651 - membrane protein, putative (TIGR), at 722,121 to 723,209
DVU0651
DVU0652: cheV-2 - chemotaxis protein CheV (TIGR), at 723,349 to 724,299
cheV-2
Position (kb) 722
723
724 Strain fitness (log2 ratio) -4
-3
-2
-1
0
1
2 at 721.152 kb on - strand, within DVU0650 at 721.154 kb on - strand, within DVU0650 at 721.171 kb on + strand, within DVU0650 at 721.223 kb on + strand, within DVU0650 at 721.288 kb on + strand, within DVU0650 at 721.344 kb on + strand, within DVU0650 at 721.437 kb on - strand at 721.477 kb on - strand at 721.548 kb on + strand at 721.548 kb on + strand at 721.548 kb on + strand at 721.548 kb on + strand at 721.548 kb on + strand at 721.548 kb on + strand at 721.548 kb on + strand at 721.556 kb on - strand at 721.556 kb on - strand at 721.556 kb on - strand at 721.584 kb on - strand at 721.672 kb on - strand at 721.674 kb on + strand at 721.674 kb on + strand at 721.682 kb on - strand at 721.732 kb on - strand at 721.739 kb on - strand at 721.780 kb on - strand at 721.813 kb on - strand at 721.825 kb on - strand at 721.844 kb on - strand at 721.881 kb on + strand at 721.895 kb on - strand at 721.914 kb on - strand at 721.918 kb on + strand at 721.988 kb on + strand at 722.008 kb on - strand at 722.013 kb on + strand at 722.046 kb on + strand at 722.054 kb on - strand at 722.056 kb on + strand at 722.138 kb on - strand at 722.143 kb on + strand at 722.151 kb on - strand at 722.188 kb on - strand at 722.195 kb on + strand at 722.207 kb on + strand at 722.210 kb on - strand at 722.254 kb on + strand, within DVU0651 at 722.305 kb on - strand, within DVU0651 at 722.320 kb on - strand, within DVU0651 at 722.326 kb on + strand, within DVU0651 at 722.374 kb on - strand, within DVU0651 at 722.435 kb on + strand, within DVU0651 at 722.474 kb on + strand, within DVU0651 at 722.478 kb on - strand, within DVU0651 at 722.558 kb on + strand, within DVU0651 at 722.572 kb on - strand, within DVU0651 at 722.623 kb on + strand, within DVU0651 at 722.631 kb on - strand, within DVU0651 at 722.654 kb on - strand, within DVU0651 at 722.768 kb on + strand, within DVU0651 at 722.807 kb on + strand, within DVU0651 at 722.807 kb on + strand, within DVU0651 at 722.807 kb on + strand, within DVU0651 at 722.875 kb on + strand, within DVU0651 at 722.885 kb on - strand, within DVU0651 at 722.924 kb on - strand, within DVU0651 at 722.986 kb on - strand, within DVU0651 at 722.998 kb on - strand, within DVU0651 at 722.998 kb on - strand, within DVU0651 at 723.073 kb on - strand, within DVU0651 at 723.090 kb on + strand, within DVU0651 at 723.098 kb on - strand, within DVU0651 at 723.116 kb on + strand at 723.184 kb on + strand at 723.184 kb on + strand at 723.191 kb on + strand at 723.192 kb on - strand at 723.282 kb on + strand at 723.282 kb on + strand at 723.290 kb on - strand at 723.339 kb on + strand at 723.512 kb on + strand, within cheV-2 at 723.600 kb on - strand, within cheV-2 at 723.605 kb on + strand, within cheV-2 at 723.615 kb on + strand, within cheV-2 at 723.643 kb on - strand, within cheV-2 at 723.643 kb on - strand, within cheV-2 at 723.703 kb on + strand, within cheV-2 at 723.767 kb on + strand, within cheV-2 at 723.767 kb on + strand, within cheV-2 at 723.778 kb on + strand, within cheV-2 at 723.809 kb on - strand, within cheV-2 at 723.885 kb on + strand, within cheV-2 at 723.995 kb on + strand, within cheV-2 at 724.003 kb on - strand, within cheV-2 at 724.106 kb on + strand, within cheV-2 at 724.106 kb on + strand, within cheV-2 at 724.106 kb on + strand, within cheV-2 at 724.114 kb on - strand, within cheV-2 at 724.163 kb on - strand, within cheV-2 at 724.165 kb on - strand, within cheV-2 at 724.198 kb on + strand, within cheV-2
Per-strain Table
Position Strand Gene LocusTag Fraction Pyruvate-Sulfite (60-20mM) with Selenate 750uM remove 721,152 - DVU0650 0.62 -0.4 721,154 - DVU0650 0.62 -0.7 721,171 + DVU0650 0.64 -0.3 721,223 + DVU0650 0.70 -0.8 721,288 + DVU0650 0.77 +0.1 721,344 + DVU0650 0.83 -0.1 721,437 - +0.1 721,477 - +0.3 721,548 + -0.7 721,548 + -0.2 721,548 + +0.2 721,548 + -1.5 721,548 + -1.1 721,548 + +1.5 721,548 + -0.3 721,556 - -0.8 721,556 - -1.5 721,556 - +0.2 721,584 - -0.5 721,672 - +0.2 721,674 + -0.7 721,674 + -0.9 721,682 - -0.0 721,732 - -1.0 721,739 - +1.0 721,780 - -0.2 721,813 - +0.9 721,825 - -0.6 721,844 - -0.3 721,881 + +0.0 721,895 - -0.5 721,914 - +2.4 721,918 + -1.0 721,988 + +0.2 722,008 - -0.1 722,013 + -0.6 722,046 + -0.3 722,054 - +0.0 722,056 + -0.5 722,138 - +0.7 722,143 + +0.5 722,151 - -0.0 722,188 - -0.1 722,195 + -4.0 722,207 + +0.4 722,210 - +0.1 722,254 + DVU0651 0.12 +1.0 722,305 - DVU0651 0.17 -0.2 722,320 - DVU0651 0.18 -0.0 722,326 + DVU0651 0.19 -0.0 722,374 - DVU0651 0.23 -0.1 722,435 + DVU0651 0.29 +0.5 722,474 + DVU0651 0.32 -0.6 722,478 - DVU0651 0.33 -0.2 722,558 + DVU0651 0.40 +0.3 722,572 - DVU0651 0.41 +0.3 722,623 + DVU0651 0.46 -0.5 722,631 - DVU0651 0.47 +0.1 722,654 - DVU0651 0.49 -0.3 722,768 + DVU0651 0.59 -0.0 722,807 + DVU0651 0.63 -1.2 722,807 + DVU0651 0.63 -1.1 722,807 + DVU0651 0.63 +0.1 722,875 + DVU0651 0.69 +1.4 722,885 - DVU0651 0.70 -1.4 722,924 - DVU0651 0.74 -0.3 722,986 - DVU0651 0.79 +0.1 722,998 - DVU0651 0.81 -0.1 722,998 - DVU0651 0.81 -1.3 723,073 - DVU0651 0.87 +2.1 723,090 + DVU0651 0.89 +0.9 723,098 - DVU0651 0.90 -1.9 723,116 + +2.7 723,184 + +0.1 723,184 + +0.3 723,191 + -0.4 723,192 - +0.4 723,282 + +0.4 723,282 + -0.4 723,290 - -0.7 723,339 + +2.1 723,512 + cheV-2 DVU0652 0.17 -0.6 723,600 - cheV-2 DVU0652 0.26 +0.6 723,605 + cheV-2 DVU0652 0.27 -0.2 723,615 + cheV-2 DVU0652 0.28 +0.3 723,643 - cheV-2 DVU0652 0.31 +0.3 723,643 - cheV-2 DVU0652 0.31 -0.3 723,703 + cheV-2 DVU0652 0.37 -0.7 723,767 + cheV-2 DVU0652 0.44 -1.4 723,767 + cheV-2 DVU0652 0.44 -0.1 723,778 + cheV-2 DVU0652 0.45 -0.3 723,809 - cheV-2 DVU0652 0.48 +0.0 723,885 + cheV-2 DVU0652 0.56 -1.5 723,995 + cheV-2 DVU0652 0.68 -0.6 724,003 - cheV-2 DVU0652 0.69 +0.2 724,106 + cheV-2 DVU0652 0.80 -1.1 724,106 + cheV-2 DVU0652 0.80 -0.5 724,106 + cheV-2 DVU0652 0.80 -2.4 724,114 - cheV-2 DVU0652 0.80 -0.2 724,163 - cheV-2 DVU0652 0.86 -0.5 724,165 - cheV-2 DVU0652 0.86 +0.1 724,198 + cheV-2 DVU0652 0.89 -1.6
Or see this region's nucleotide sequence