Strain Fitness in Synechococcus elongatus PCC 7942 around Synpcc7942_2577

Experiment: BG11 with Cisplatin 0.05 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	BG11 with Cisplatin 0.05 mg/ml
2,661,192	+		Synpcc7942_2576	0.39	+1.4
2,661,214	-		Synpcc7942_2576	0.41	+1.1
2,661,223	+		Synpcc7942_2576	0.41	+0.5
2,661,231	-		Synpcc7942_2576	0.42	+0.8
2,661,231	-		Synpcc7942_2576	0.42	+0.6
2,661,244	+		Synpcc7942_2576	0.43	+0.9
2,661,246	+		Synpcc7942_2576	0.43	+1.4
2,661,257	-		Synpcc7942_2576	0.44	+0.7
2,661,259	-				+2.3
2,661,267	-		Synpcc7942_2576	0.44	+0.7
2,661,283	-		Synpcc7942_2576	0.45	+1.2
2,661,285	+		Synpcc7942_2576	0.45	+0.4
2,661,293	-		Synpcc7942_2576	0.46	+0.9
2,661,306	+		Synpcc7942_2576	0.47	+1.0
2,661,306	+		Synpcc7942_2576	0.47	+0.5
2,661,327	+		Synpcc7942_2576	0.48	+1.0
2,661,335	+		Synpcc7942_2576	0.49	+1.8
2,661,335	+		Synpcc7942_2576	0.49	+0.6
2,661,335	+		Synpcc7942_2576	0.49	+0.3
2,661,343	-		Synpcc7942_2576	0.49	+1.0
2,661,343	-		Synpcc7942_2576	0.49	-0.5
2,661,343	-		Synpcc7942_2576	0.49	+1.5
2,661,364	-		Synpcc7942_2576	0.51	+1.1
2,661,365	-				+0.3
2,661,374	+		Synpcc7942_2576	0.51	+1.6
2,661,382	-		Synpcc7942_2576	0.52	+0.6
2,661,382	-		Synpcc7942_2576	0.52	+1.5
2,661,384	+		Synpcc7942_2576	0.52	+0.6
2,661,387	-		Synpcc7942_2576	0.52	+1.9
2,661,389	+		Synpcc7942_2576	0.52	+0.3
2,661,414	+		Synpcc7942_2576	0.54	+0.3
2,661,414	+		Synpcc7942_2576	0.54	-0.9
2,661,414	+		Synpcc7942_2576	0.54	+1.4
2,661,414	+		Synpcc7942_2576	0.54	+1.3
2,661,422	-		Synpcc7942_2576	0.55	+1.6
2,661,422	-		Synpcc7942_2576	0.55	+1.4
2,661,422	-		Synpcc7942_2576	0.55	+0.3
2,661,422	-		Synpcc7942_2576	0.55	+1.6
2,661,422	-		Synpcc7942_2576	0.55	+0.1
2,661,422	-		Synpcc7942_2576	0.55	+0.6
2,661,482	+		Synpcc7942_2576	0.58	+1.9
2,661,482	+		Synpcc7942_2576	0.58	+1.6
2,661,490	-		Synpcc7942_2576	0.59	+0.4
2,661,495	+		Synpcc7942_2576	0.59	+0.5
2,661,495	-		Synpcc7942_2576	0.59	+1.9
2,661,561	+		Synpcc7942_2576	0.64	+0.8
2,661,563	+		Synpcc7942_2576	0.64	+0.5
2,661,571	-		Synpcc7942_2576	0.64	+0.5
2,661,586	-		Synpcc7942_2576	0.65	+0.9
2,661,592	-		Synpcc7942_2576	0.66	-0.9
2,661,602	-		Synpcc7942_2576	0.66	+0.3
2,661,618	-		Synpcc7942_2576	0.67	+0.3
2,661,618	-		Synpcc7942_2576	0.67	+0.9
2,661,632	+		Synpcc7942_2576	0.68	+0.6
2,661,644	-		Synpcc7942_2576	0.69	-0.2
2,661,677	+		Synpcc7942_2576	0.71	+1.2
2,661,686	+		Synpcc7942_2576	0.72	-0.6
2,661,719	+		Synpcc7942_2576	0.74	+0.8
2,661,719	+		Synpcc7942_2576	0.74	+1.1
2,661,719	+		Synpcc7942_2576	0.74	+0.6
2,661,738	+		Synpcc7942_2576	0.75	+1.2
2,661,753	-		Synpcc7942_2576	0.76	+0.6
2,661,760	-		Synpcc7942_2576	0.77	+1.7
2,661,776	+		Synpcc7942_2576	0.78	+0.7
2,661,781	+		Synpcc7942_2576	0.78	+0.1
2,661,781	+		Synpcc7942_2576	0.78	+1.3
2,661,781	+		Synpcc7942_2576	0.78	+1.1
2,661,798	-		Synpcc7942_2576	0.79	+0.5
2,661,856	-		Synpcc7942_2576	0.83	+0.2
2,661,874	+		Synpcc7942_2576	0.84	+1.2
2,661,928	-		Synpcc7942_2576	0.88	+1.0
2,661,944	+		Synpcc7942_2576	0.89	+0.5
2,661,952	-		Synpcc7942_2576	0.90	-0.7
2,661,962	-				+0.8
2,661,962	-				+0.5
2,661,962	-				-0.2
2,661,969	+				+1.0
2,661,969	+				+2.1
2,661,977	-				+0.5
2,661,977	-				+0.7
2,661,979	+				+1.1
2,661,979	+				-3.5
2,661,979	+				+0.7
2,661,980	+				+0.9
2,661,987	-				+0.8
2,661,991	+				+1.1
2,661,991	+				+0.9
2,661,992	+				+1.2
2,662,011	-				+0.5
2,662,049	+				+0.9
2,662,053	-				+0.6
2,662,076	-				+0.2
2,662,118	+				-1.6
2,662,118	+				-1.5
2,662,118	+				+1.4
2,662,118	+				+1.4
2,662,126	-				+0.7
2,662,126	-				+1.2
2,662,126	-				+0.2
2,662,126	-				+0.3
2,662,126	-				+1.3
2,662,126	-				+0.8
2,662,148	-				+1.3
2,662,181	+				-0.3
2,662,185	-				-0.8
2,662,187	+				-1.5
2,662,192	+				+0.0
2,662,211	+				-2.2
2,662,231	-				-0.7
2,662,250	+				-2.0
2,662,256	-				-1.7
2,662,258	-				-1.6
2,662,258	-				-2.5
2,662,268	-	murQ	Synpcc7942_2577	0.11	+0.4
2,662,268	-	murQ	Synpcc7942_2577	0.11	-2.0
2,662,307	+	murQ	Synpcc7942_2577	0.15	-1.4
2,662,315	-	murQ	Synpcc7942_2577	0.16	-1.5
2,662,315	-	murQ	Synpcc7942_2577	0.16	-1.5
2,662,338	-	murQ	Synpcc7942_2577	0.18	+0.3
2,662,338	-	murQ	Synpcc7942_2577	0.18	-1.5
2,662,370	+	murQ	Synpcc7942_2577	0.22	-1.0
2,662,370	+	murQ	Synpcc7942_2577	0.22	-1.7
2,662,378	-	murQ	Synpcc7942_2577	0.23	-2.4
2,662,415	+	murQ	Synpcc7942_2577	0.27	-1.7
2,662,416	+	murQ	Synpcc7942_2577	0.27	-3.0
2,662,423	-	murQ	Synpcc7942_2577	0.27	-1.2
2,662,423	-	murQ	Synpcc7942_2577	0.27	+0.3
2,662,440	+	murQ	Synpcc7942_2577	0.29	-1.3
2,662,468	+	murQ	Synpcc7942_2577	0.32	+0.7
2,662,498	+	murQ	Synpcc7942_2577	0.36	-0.6
2,662,498	+	murQ	Synpcc7942_2577	0.36	-1.8
2,662,506	-	murQ	Synpcc7942_2577	0.36	-2.4
2,662,637	+	murQ	Synpcc7942_2577	0.51	-2.2
2,662,643	+	murQ	Synpcc7942_2577	0.51	-2.3
2,662,659	+	murQ	Synpcc7942_2577	0.53	-0.8
2,662,731	-	murQ	Synpcc7942_2577	0.61	-1.9
2,662,733	+	murQ	Synpcc7942_2577	0.61	-3.4
2,662,735	+	murQ	Synpcc7942_2577	0.61	-1.3
2,662,787	+	murQ	Synpcc7942_2577	0.67	+0.1
2,662,788	+	murQ	Synpcc7942_2577	0.67	-0.9
2,662,807	-	murQ	Synpcc7942_2577	0.69	-0.4
2,662,848	+	murQ	Synpcc7942_2577	0.73	-0.8
2,662,880	+	murQ	Synpcc7942_2577	0.77	-2.2
2,662,888	-	murQ	Synpcc7942_2577	0.78	-1.2
2,662,912	-	murQ	Synpcc7942_2577	0.80	-0.6
2,662,931	+	murQ	Synpcc7942_2577	0.82	-2.2
2,662,946	+	murQ	Synpcc7942_2577	0.84	-2.8
2,662,954	-	murQ	Synpcc7942_2577	0.85	-1.3
2,662,960	+	murQ	Synpcc7942_2577	0.86	-2.6
2,662,967	+	murQ	Synpcc7942_2577	0.86	-1.0
2,662,983	+	murQ	Synpcc7942_2577	0.88	-3.1
2,663,003	+				-0.2
2,663,011	-				-1.5
2,663,011	-				-1.0
2,663,011	-				-1.8
2,663,011	-				-2.8
2,663,011	-				-3.0
2,663,011	-				-1.5
2,663,026	+				-0.4
2,663,040	+				-1.9
2,663,132	-				-2.1
2,663,146	-				+0.5
2,663,183	+		Synpcc7942_2578	0.19	-0.8
2,663,183	+		Synpcc7942_2578	0.19	-0.5
2,663,196	-		Synpcc7942_2578	0.22	-0.7
2,663,196	-		Synpcc7942_2578	0.22	-1.6
2,663,221	+		Synpcc7942_2578	0.27	-1.3
2,663,232	+		Synpcc7942_2578	0.29	-0.2
2,663,240	-		Synpcc7942_2578	0.31	-0.6
2,663,284	+		Synpcc7942_2578	0.40	-0.4
2,663,284	-		Synpcc7942_2578	0.40	-0.4
2,663,338	-		Synpcc7942_2578	0.52	-1.5
2,663,343	+		Synpcc7942_2578	0.53	-0.9
2,663,360	+		Synpcc7942_2578	0.56	-0.4
2,663,361	-		Synpcc7942_2578	0.57	-0.5
2,663,382	+				-0.5
2,663,382	+		Synpcc7942_2578	0.61	+0.2
2,663,382	+		Synpcc7942_2578	0.61	+0.1
2,663,382	+		Synpcc7942_2578	0.61	-0.2
2,663,382	+		Synpcc7942_2578	0.61	-1.2
2,663,387	+		Synpcc7942_2578	0.62	-0.4
2,663,390	-		Synpcc7942_2578	0.63	-1.4
2,663,390	-		Synpcc7942_2578	0.63	-0.5
2,663,390	-		Synpcc7942_2578	0.63	-0.9
2,663,414	+		Synpcc7942_2578	0.68	-0.5
2,663,414	+		Synpcc7942_2578	0.68	-2.1
2,663,475	+		Synpcc7942_2578	0.81	-0.1
2,663,478	+		Synpcc7942_2578	0.81	-1.3
2,663,478	+		Synpcc7942_2578	0.81	+0.1
2,663,478	+		Synpcc7942_2578	0.81	+0.5
2,663,483	+		Synpcc7942_2578	0.82	-0.2
2,663,485	+		Synpcc7942_2578	0.83	-1.9
2,663,485	+		Synpcc7942_2578	0.83	-1.0
2,663,486	-		Synpcc7942_2578	0.83	+0.4
2,663,488	+		Synpcc7942_2578	0.83	-0.6
2,663,490	+		Synpcc7942_2578	0.84	-0.7
2,663,498	-		Synpcc7942_2578	0.85	-1.5
2,663,527	+				-0.4
2,663,527	+				-0.7
2,663,528	+				+0.3
2,663,541	+				-0.5
2,663,556	-				-1.6
2,663,564	+				-1.2