Strain Fitness in Synechococcus elongatus PCC 7942 around Synpcc7942_2470

Experiment: BG11 with Cisplatin 0.05 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	BG11 with Cisplatin 0.05 mg/ml
2,550,716	-				+1.2
2,550,738	-				-1.1
2,550,754	-				-0.4
2,550,754	-				-0.3
2,550,768	+				+1.0
2,550,777	+				+1.2
2,550,813	+		Synpcc7942_2469	0.14	+0.5
2,550,813	+		Synpcc7942_2469	0.14	-1.2
2,550,816	-		Synpcc7942_2469	0.15	-0.4
2,550,832	+		Synpcc7942_2469	0.17	-1.0
2,550,853	-		Synpcc7942_2469	0.19	-1.2
2,550,909	-		Synpcc7942_2469	0.27	-2.1
2,550,982	+		Synpcc7942_2469	0.36	-0.4
2,550,991	-		Synpcc7942_2469	0.37	-0.2
2,551,044	-		Synpcc7942_2469	0.44	-3.4
2,551,046	-		Synpcc7942_2469	0.44	-0.8
2,551,082	-		Synpcc7942_2469	0.49	-0.1
2,551,095	-		Synpcc7942_2469	0.51	+0.9
2,551,114	-		Synpcc7942_2469	0.53	+1.2
2,551,173	+		Synpcc7942_2469	0.61	-1.5
2,551,173	-		Synpcc7942_2469	0.61	-3.4
2,551,181	-		Synpcc7942_2469	0.62	-0.7
2,551,181	-		Synpcc7942_2469	0.62	+0.7
2,551,201	-		Synpcc7942_2469	0.64	+0.1
2,551,280	+		Synpcc7942_2469	0.75	-0.8
2,551,399	+				-1.4
2,551,399	+				+0.1
2,551,445	+				+0.5
2,551,463	+				-1.1
2,551,471	-				-0.8
2,551,511	-				-0.2
2,551,516	+				+0.4
2,551,564	+				+0.1
2,551,588	+				-0.3
2,551,590	-				+1.5
2,551,607	-				+0.7
2,551,651	+				-2.5
2,551,658	-				-1.3
2,551,659	-				-0.8
2,551,709	+				-0.6
2,551,717	-				-1.5
2,551,736	-				-1.2
2,551,787	+		Synpcc7942_2470	0.12	-2.1
2,551,794	-		Synpcc7942_2470	0.13	-0.9
2,551,810	-		Synpcc7942_2470	0.15	-2.9
2,551,818	+		Synpcc7942_2470	0.16	-2.6
2,551,818	+		Synpcc7942_2470	0.16	-2.0
2,551,826	-		Synpcc7942_2470	0.17	-1.8
2,551,849	+		Synpcc7942_2470	0.20	-0.9
2,551,888	+		Synpcc7942_2470	0.25	-2.7
2,551,896	-		Synpcc7942_2470	0.26	-3.2
2,551,896	-		Synpcc7942_2470	0.26	-1.9
2,551,898	+		Synpcc7942_2470	0.26	-0.5
2,551,901	-		Synpcc7942_2470	0.27	-0.9
2,551,903	+		Synpcc7942_2470	0.27	-0.6
2,551,911	-		Synpcc7942_2470	0.28	-2.8
2,551,915	-		Synpcc7942_2470	0.28	-0.5
2,551,917	+		Synpcc7942_2470	0.29	-1.2
2,551,917	+		Synpcc7942_2470	0.29	-1.2
2,551,917	+		Synpcc7942_2470	0.29	-1.8
2,551,917	+		Synpcc7942_2470	0.29	-1.9
2,551,923	+		Synpcc7942_2470	0.29	-0.4
2,551,925	-		Synpcc7942_2470	0.30	-1.2
2,551,925	-		Synpcc7942_2470	0.30	-1.7
2,551,936	-		Synpcc7942_2470	0.31	-2.1
2,551,947	+		Synpcc7942_2470	0.33	-2.1
2,551,954	-		Synpcc7942_2470	0.33	-2.0
2,551,973	-		Synpcc7942_2470	0.36	-1.1
2,551,973	-		Synpcc7942_2470	0.36	-1.8
2,552,010	-		Synpcc7942_2470	0.41	-2.7
2,552,079	-		Synpcc7942_2470	0.50	-2.5
2,552,081	+		Synpcc7942_2470	0.50	-1.2
2,552,081	+		Synpcc7942_2470	0.50	-2.0
2,552,081	+		Synpcc7942_2470	0.50	-2.1
2,552,111	+		Synpcc7942_2470	0.54	-3.2
2,552,126	-		Synpcc7942_2470	0.56	-2.0
2,552,142	+		Synpcc7942_2470	0.58	-0.8
2,552,149	-		Synpcc7942_2470	0.59	-2.4
2,552,205	+		Synpcc7942_2470	0.66	-1.7
2,552,223	-		Synpcc7942_2470	0.68	-1.9
2,552,230	-		Synpcc7942_2470	0.69	-1.3
2,552,232	-		Synpcc7942_2470	0.70	-0.7
2,552,232	-		Synpcc7942_2470	0.70	-1.8
2,552,259	+		Synpcc7942_2470	0.73	-1.5
2,552,259	+		Synpcc7942_2470	0.73	-2.3
2,552,259	+		Synpcc7942_2470	0.73	-1.3
2,552,267	-		Synpcc7942_2470	0.74	-2.5
2,552,267	-		Synpcc7942_2470	0.74	-1.3
2,552,267	-		Synpcc7942_2470	0.74	-3.2
2,552,267	-		Synpcc7942_2470	0.74	-2.2
2,552,269	+		Synpcc7942_2470	0.74	-1.3
2,552,269	+		Synpcc7942_2470	0.74	-2.6
2,552,274	+		Synpcc7942_2470	0.75	-0.4
2,552,277	-		Synpcc7942_2470	0.76	-2.6
2,552,282	-		Synpcc7942_2470	0.76	-1.4
2,552,292	+		Synpcc7942_2470	0.77	-0.7
2,552,292	+		Synpcc7942_2470	0.77	-3.0
2,552,292	+		Synpcc7942_2470	0.77	-1.5
2,552,300	-		Synpcc7942_2470	0.79	-0.6
2,552,300	-		Synpcc7942_2470	0.79	-2.6
2,552,304	-		Synpcc7942_2470	0.79	-1.1
2,552,340	+		Synpcc7942_2470	0.84	-0.3
2,552,375	+		Synpcc7942_2470	0.88	-0.8
2,552,375	+		Synpcc7942_2470	0.88	-0.8
2,552,375	+		Synpcc7942_2470	0.88	-1.8
2,552,413	+				-1.8
2,552,416	-				-1.5
2,552,421	-				-0.8
2,552,447	+				-1.3
2,552,473	-				+0.4
2,552,497	+				-0.5
2,552,497	+				-0.5
2,552,497	+				-0.1
2,552,499	+				-0.2
2,552,499	+				-0.5
2,552,499	+				+0.1
2,552,499	+				-0.2
2,552,499	+				-0.8
2,552,499	+				-0.4
2,552,507	-				+0.2
2,552,507	-				-0.2
2,552,509	+				-0.4
2,552,509	+				-0.2
2,552,531	+				-1.5
2,552,531	+				-0.9
2,552,539	-				+0.7
2,552,542	+				-0.1
2,552,542	+				-0.1
2,552,552	+				+0.6
2,552,555	-				+0.3
2,552,561	-				+0.1
2,552,564	+				-0.8
2,552,564	+				-0.3
2,552,585	-				+0.3
2,552,834	+	nusB	Synpcc7942_2471	0.35	-3.1
2,553,209	-				-0.5
2,553,216	+				-2.0
2,553,219	-				-2.6
2,553,219	-				-1.0
2,553,224	-				-0.9