Strain Fitness in Synechococcus elongatus PCC 7942 around Synpcc7942_2246

Experiment: BG11 with Cisplatin 0.05 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	BG11 with Cisplatin 0.05 mg/ml
2,310,389	+	psbZ	Synpcc7942_2245	0.24	-1.4
2,310,497	+	psbZ	Synpcc7942_2245	0.81	-2.8
2,310,545	+				-1.8
2,310,665	-				-0.1
2,310,680	+				+0.6
2,310,685	+				+0.7
2,310,692	-				+1.7
2,310,773	-				+0.5
2,310,822	+				-4.1
2,310,845	+				-2.9
2,310,845	+				-4.1
2,310,845	+				-4.5
2,310,845	+				-4.1
2,310,845	+				-3.2
2,310,853	-				-2.6
2,310,853	-				-3.4
2,310,853	-				-1.1
2,310,853	-				-2.6
2,310,867	-				-2.0
2,310,869	+				-3.6
2,310,911	+		Synpcc7942_2246	0.11	-2.7
2,310,924	-		Synpcc7942_2246	0.12	-1.2
2,310,935	+		Synpcc7942_2246	0.13	-3.2
2,310,942	+		Synpcc7942_2246	0.13	-2.8
2,310,942	+		Synpcc7942_2246	0.13	-2.5
2,310,942	+		Synpcc7942_2246	0.13	-1.8
2,310,950	-		Synpcc7942_2246	0.14	-3.0
2,310,972	+		Synpcc7942_2246	0.15	-2.9
2,310,984	+		Synpcc7942_2246	0.16	-4.2
2,310,984	+		Synpcc7942_2246	0.16	-3.5
2,311,030	+		Synpcc7942_2246	0.19	-3.6
2,311,030	+		Synpcc7942_2246	0.19	-4.1
2,311,038	-		Synpcc7942_2246	0.19	-3.4
2,311,092	-		Synpcc7942_2246	0.23	-3.4
2,311,144	+		Synpcc7942_2246	0.26	-3.2
2,311,144	+		Synpcc7942_2246	0.26	-3.4
2,311,200	+		Synpcc7942_2246	0.30	-3.2
2,311,210	+		Synpcc7942_2246	0.30	-2.4
2,311,210	+		Synpcc7942_2246	0.30	-3.0
2,311,213	-		Synpcc7942_2246	0.30	-2.9
2,311,330	+		Synpcc7942_2246	0.38	-1.8
2,311,330	+		Synpcc7942_2246	0.38	-2.9
2,311,345	+		Synpcc7942_2246	0.39	-3.4
2,311,357	+		Synpcc7942_2246	0.40	-1.2
2,311,392	-		Synpcc7942_2246	0.42	-2.9
2,311,433	-		Synpcc7942_2246	0.44	-3.2
2,311,439	+		Synpcc7942_2246	0.45	-3.3
2,311,439	+		Synpcc7942_2246	0.45	-2.8
2,311,475	+		Synpcc7942_2246	0.47	-1.8
2,311,480	+		Synpcc7942_2246	0.47	-2.7
2,311,493	+		Synpcc7942_2246	0.48	+0.2
2,311,500	+		Synpcc7942_2246	0.49	-3.6
2,311,520	-		Synpcc7942_2246	0.50	-4.1
2,311,533	-		Synpcc7942_2246	0.51	-2.6
2,311,533	-		Synpcc7942_2246	0.51	-3.7
2,311,549	-		Synpcc7942_2246	0.52	-1.1
2,311,592	-		Synpcc7942_2246	0.55	-3.4
2,311,635	+		Synpcc7942_2246	0.57	-2.4
2,311,643	-		Synpcc7942_2246	0.58	-3.1
2,311,649	+		Synpcc7942_2246	0.58	-1.5
2,311,708	-		Synpcc7942_2246	0.62	-2.4
2,311,747	-		Synpcc7942_2246	0.65	-2.7
2,311,763	-		Synpcc7942_2246	0.66	-3.0
2,311,791	+		Synpcc7942_2246	0.67	-3.2
2,311,799	-		Synpcc7942_2246	0.68	-2.0
2,311,804	+		Synpcc7942_2246	0.68	-1.9
2,311,804	+		Synpcc7942_2246	0.68	-2.0
2,311,850	-		Synpcc7942_2246	0.71	-2.4
2,311,854	+		Synpcc7942_2246	0.71	-2.8
2,311,854	+		Synpcc7942_2246	0.71	-2.6
2,311,854	+		Synpcc7942_2246	0.71	-3.6
2,311,899	+		Synpcc7942_2246	0.74	-6.1
2,311,922	-		Synpcc7942_2246	0.76	-3.8
2,311,922	-		Synpcc7942_2246	0.76	-3.7
2,311,922	-		Synpcc7942_2246	0.76	-2.3
2,311,961	+		Synpcc7942_2246	0.78	-2.7
2,311,969	-		Synpcc7942_2246	0.79	-2.9
2,311,992	-		Synpcc7942_2246	0.80	-3.2
2,312,011	+		Synpcc7942_2246	0.81	-1.7
2,312,019	-		Synpcc7942_2246	0.82	-2.5
2,312,024	-		Synpcc7942_2246	0.82	-3.6
2,312,047	-		Synpcc7942_2246	0.84	-3.4
2,312,065	-		Synpcc7942_2246	0.85	-2.0
2,312,065	-		Synpcc7942_2246	0.85	-3.7
2,312,077	+		Synpcc7942_2246	0.86	-2.3
2,312,085	-		Synpcc7942_2246	0.86	-2.8
2,312,089	+		Synpcc7942_2246	0.86	-3.5
2,312,102	+		Synpcc7942_2246	0.87	-1.9
2,312,129	+		Synpcc7942_2246	0.89	-2.7
2,312,137	-		Synpcc7942_2246	0.90	-2.4
2,312,143	-		Synpcc7942_2246	0.90	-2.7
2,312,179	+				-1.4
2,312,209	+				-4.9
2,312,252	+				-2.4
2,312,260	-				-3.3
2,312,291	+				-1.0
2,312,317	+				+0.2
2,312,325	-				+0.6
2,312,344	+				-0.2
2,312,353	-				-0.9
2,312,369	+				-0.0
2,312,375	+				+0.3
2,312,377	-				+0.3
2,312,388	+				-0.1
2,312,403	+				-0.4
2,312,403	+				+0.1
2,312,408	+				+0.9
2,312,416	-				+0.1
2,312,416	-				-1.2
2,312,416	-				-0.9
2,312,420	+				+1.1
2,312,420	+				+0.8
2,312,428	-				+0.5
2,312,428	-				-0.9
2,312,428	-				-0.7
2,312,428	-				+0.1
2,312,428	-				+0.9
2,312,489	+				-0.4
2,312,512	+				-0.7
2,312,512	+				-1.1
2,312,512	+				-1.0
2,312,520	-				+0.3
2,312,520	-				+0.1
2,312,520	-				-0.6
2,312,520	-				+0.1
2,312,525	-				+0.7
2,312,530	-				-0.1
2,312,530	-				+0.2
2,312,530	-				+0.3
2,312,563	+				+0.8
2,312,592	+	mutS	Synpcc7942_2247	0.11	+0.6
2,312,600	-	mutS	Synpcc7942_2247	0.11	-0.4
2,312,610	-	mutS	Synpcc7942_2247	0.11	+1.3
2,312,624	+	mutS	Synpcc7942_2247	0.12	+0.1
2,312,625	+	mutS	Synpcc7942_2247	0.12	+0.2
2,312,632	-	mutS	Synpcc7942_2247	0.12	+0.7
2,312,632	-	mutS	Synpcc7942_2247	0.12	-2.5
2,312,651	+	mutS	Synpcc7942_2247	0.13	+0.4
2,312,659	-	mutS	Synpcc7942_2247	0.13	+0.2
2,312,672	-	mutS	Synpcc7942_2247	0.14	-0.8
2,312,703	+	mutS	Synpcc7942_2247	0.15	-0.1
2,312,705	+	mutS	Synpcc7942_2247	0.15	-0.3
2,312,705	+	mutS	Synpcc7942_2247	0.15	+0.2
2,312,705	+	mutS	Synpcc7942_2247	0.15	-0.6
2,312,707	+	mutS	Synpcc7942_2247	0.15	-0.2
2,312,707	+	mutS	Synpcc7942_2247	0.15	+0.6
2,312,713	-	mutS	Synpcc7942_2247	0.15	+0.1
2,312,713	-	mutS	Synpcc7942_2247	0.15	+0.6
2,312,713	-	mutS	Synpcc7942_2247	0.15	-0.4
2,312,715	-	mutS	Synpcc7942_2247	0.15	-0.3
2,312,751	-	mutS	Synpcc7942_2247	0.17	-1.1
2,312,775	+	mutS	Synpcc7942_2247	0.18	-0.7
2,312,775	+	mutS	Synpcc7942_2247	0.18	-0.0
2,312,807	-	mutS	Synpcc7942_2247	0.19	+0.8
2,312,812	-	mutS	Synpcc7942_2247	0.19	+1.0
2,312,812	-	mutS	Synpcc7942_2247	0.19	-1.4
2,312,831	+	mutS	Synpcc7942_2247	0.20	-1.0
2,312,831	+	mutS	Synpcc7942_2247	0.20	-1.1
2,312,839	-	mutS	Synpcc7942_2247	0.20	+1.1
2,312,839	-	mutS	Synpcc7942_2247	0.20	+0.7
2,312,839	-	mutS	Synpcc7942_2247	0.20	+0.2
2,312,848	+	mutS	Synpcc7942_2247	0.20	-1.7
2,312,848	+	mutS	Synpcc7942_2247	0.20	-0.2
2,312,853	+	mutS	Synpcc7942_2247	0.20	+0.0
2,312,856	-	mutS	Synpcc7942_2247	0.21	-0.3
2,312,861	+	mutS	Synpcc7942_2247	0.21	-0.1
2,312,861	-	mutS	Synpcc7942_2247	0.21	-0.5
2,312,861	-	mutS	Synpcc7942_2247	0.21	-2.7
2,312,871	-	mutS	Synpcc7942_2247	0.21	+0.9
2,312,875	-	mutS	Synpcc7942_2247	0.21	-1.9
2,312,876	-	mutS	Synpcc7942_2247	0.21	+0.5
2,312,899	-	mutS	Synpcc7942_2247	0.22	-0.8
2,312,899	-	mutS	Synpcc7942_2247	0.22	-0.3
2,312,949	+	mutS	Synpcc7942_2247	0.24	-0.5
2,312,952	-	mutS	Synpcc7942_2247	0.24	+0.3
2,312,954	+	mutS	Synpcc7942_2247	0.24	+0.9
2,312,957	-	mutS	Synpcc7942_2247	0.24	-0.1
2,312,962	-	mutS	Synpcc7942_2247	0.25	+0.4
2,312,962	-	mutS	Synpcc7942_2247	0.25	+0.2
2,313,004	-	mutS	Synpcc7942_2247	0.26	-0.1
2,313,006	-	mutS	Synpcc7942_2247	0.26	+1.4
2,313,008	+	mutS	Synpcc7942_2247	0.26	-0.4
2,313,023	-	mutS	Synpcc7942_2247	0.27	+0.3
2,313,023	-	mutS	Synpcc7942_2247	0.27	-3.0
2,313,037	+	mutS	Synpcc7942_2247	0.27	-0.4
2,313,060	-	mutS	Synpcc7942_2247	0.28	-0.6
2,313,099	+	mutS	Synpcc7942_2247	0.30	+0.8
2,313,099	+	mutS	Synpcc7942_2247	0.30	-0.4
2,313,132	+	mutS	Synpcc7942_2247	0.31	+0.1
2,313,132	+				+0.5
2,313,132	+	mutS	Synpcc7942_2247	0.31	-0.4
2,313,132	+	mutS	Synpcc7942_2247	0.31	-1.4
2,313,132	+	mutS	Synpcc7942_2247	0.31	-0.2
2,313,132	+	mutS	Synpcc7942_2247	0.31	+0.3
2,313,132	+	mutS	Synpcc7942_2247	0.31	-0.4
2,313,140	-	mutS	Synpcc7942_2247	0.31	-1.3
2,313,140	-	mutS	Synpcc7942_2247	0.31	+1.2
2,313,140	-	mutS	Synpcc7942_2247	0.31	+0.9
2,313,140	-	mutS	Synpcc7942_2247	0.31	+1.1
2,313,140	-	mutS	Synpcc7942_2247	0.31	+0.7
2,313,166	+	mutS	Synpcc7942_2247	0.32	+0.6
2,313,166	+	mutS	Synpcc7942_2247	0.32	-0.4
2,313,174	-	mutS	Synpcc7942_2247	0.33	+0.4
2,313,184	-	mutS	Synpcc7942_2247	0.33	+0.3
2,313,184	-	mutS	Synpcc7942_2247	0.33	+0.2
2,313,290	+	mutS	Synpcc7942_2247	0.37	-1.3
2,313,290	+	mutS	Synpcc7942_2247	0.37	+0.0
2,313,293	-	mutS	Synpcc7942_2247	0.37	-0.8
2,313,298	-	mutS	Synpcc7942_2247	0.37	+0.0