Strain Fitness in Synechococcus elongatus PCC 7942 around Synpcc7942_2181

Experiment: BG11 with Cisplatin 0.05 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	BG11 with Cisplatin 0.05 mg/ml
2,258,982	-		Synpcc7942_2179	0.59	-1.8
2,258,997	+		Synpcc7942_2179	0.60	-0.6
2,259,005	-		Synpcc7942_2179	0.61	-0.2
2,259,009	+		Synpcc7942_2179	0.62	+0.7
2,259,009	+		Synpcc7942_2179	0.62	-0.3
2,259,009	+		Synpcc7942_2179	0.62	-0.1
2,259,036	-		Synpcc7942_2179	0.65	+0.0
2,259,036	-		Synpcc7942_2179	0.65	-0.7
2,259,057	-		Synpcc7942_2179	0.67	-0.8
2,259,060	+		Synpcc7942_2179	0.67	+0.6
2,259,063	-		Synpcc7942_2179	0.68	+1.1
2,259,125	+		Synpcc7942_2179	0.74	+0.2
2,259,127	-		Synpcc7942_2179	0.75	+0.3
2,259,128	-		Synpcc7942_2179	0.75	-0.8
2,259,128	-		Synpcc7942_2179	0.75	+0.1
2,259,128	-		Synpcc7942_2179	0.75	-2.1
2,259,128	-		Synpcc7942_2179	0.75	+0.5
2,259,141	-		Synpcc7942_2179	0.76	+0.3
2,259,151	-		Synpcc7942_2179	0.77	+0.5
2,259,188	+		Synpcc7942_2179	0.81	-0.4
2,259,193	+		Synpcc7942_2179	0.82	+0.7
2,259,226	+		Synpcc7942_2179	0.85	+0.5
2,259,231	+				-0.7
2,259,285	-				+1.0
2,259,287	+				+0.8
2,259,287	+				-0.6
2,259,287	+				+0.1
2,259,287	+				-0.6
2,259,287	+				-1.6
2,259,295	-				+0.2
2,259,295	-				-0.3
2,259,295	-				+2.3
2,259,295	-				-0.5
2,259,326	+				+2.3
2,259,336	+				+0.9
2,259,339	-				+1.3
2,259,344	-				+0.0
2,259,363	+				-1.0
2,259,400	-				-1.0
2,259,424	-				+0.1
2,259,436	-				-1.1
2,259,451	+				+0.6
2,259,468	-				-1.8
2,259,475	+				+0.2
2,259,475	+				+0.6
2,259,503	-				+0.7
2,259,544	+	prxQ-A1	Synpcc7942_2180	0.12	-1.7
2,259,544	+	prxQ-A1	Synpcc7942_2180	0.12	+0.9
2,259,544	+	prxQ-A1	Synpcc7942_2180	0.12	+0.2
2,259,588	-	prxQ-A1	Synpcc7942_2180	0.22	+0.4
2,259,604	+	prxQ-A1	Synpcc7942_2180	0.26	+0.8
2,259,618	-	prxQ-A1	Synpcc7942_2180	0.29	-2.4
2,259,620	+	prxQ-A1	Synpcc7942_2180	0.30	-1.6
2,259,626	+	prxQ-A1	Synpcc7942_2180	0.31	-1.0
2,259,628	-	prxQ-A1	Synpcc7942_2180	0.32	+1.1
2,259,628	-	prxQ-A1	Synpcc7942_2180	0.32	+0.2
2,259,719	-	prxQ-A1	Synpcc7942_2180	0.52	+0.4
2,259,733	+	prxQ-A1	Synpcc7942_2180	0.55	+0.7
2,259,739	+	prxQ-A1	Synpcc7942_2180	0.57	-0.1
2,259,739	+	prxQ-A1	Synpcc7942_2180	0.57	-0.0
2,259,739	+	prxQ-A1	Synpcc7942_2180	0.57	-0.0
2,259,784	-	prxQ-A1	Synpcc7942_2180	0.67	-0.1
2,259,795	+	prxQ-A1	Synpcc7942_2180	0.70	-0.5
2,259,795	+	prxQ-A1	Synpcc7942_2180	0.70	-0.7
2,259,795	+	prxQ-A1	Synpcc7942_2180	0.70	+0.6
2,259,828	-	prxQ-A1	Synpcc7942_2180	0.77	-0.2
2,259,873	-	prxQ-A1	Synpcc7942_2180	0.87	-0.2
2,259,873	-	prxQ-A1	Synpcc7942_2180	0.87	-0.0
2,259,873	-	prxQ-A1	Synpcc7942_2180	0.87	+0.8
2,259,903	+				+0.2
2,259,917	+				+0.7
2,259,917	+				+0.1
2,259,953	+				+0.0
2,259,963	-				+0.9
2,259,972	-				+0.2
2,259,986	+				-1.7
2,259,994	-				-2.2
2,259,994	-				-2.9
2,260,043	+				-1.3
2,260,108	-		Synpcc7942_2181	0.11	-0.7
2,260,151	+		Synpcc7942_2181	0.14	-1.6
2,260,209	+		Synpcc7942_2181	0.19	-3.1
2,260,217	-		Synpcc7942_2181	0.20	-3.3
2,260,257	-		Synpcc7942_2181	0.23	-3.3
2,260,410	-		Synpcc7942_2181	0.35	-1.8
2,260,426	+		Synpcc7942_2181	0.37	-1.7
2,260,488	-		Synpcc7942_2181	0.42	-2.6
2,260,546	+		Synpcc7942_2181	0.47	-1.4
2,260,624	+		Synpcc7942_2181	0.53	+0.3
2,260,646	-		Synpcc7942_2181	0.55	-2.5
2,260,648	-		Synpcc7942_2181	0.55	-0.7
2,260,674	+		Synpcc7942_2181	0.57	-1.8
2,260,696	+		Synpcc7942_2181	0.59	-0.6
2,260,696	+		Synpcc7942_2181	0.59	+0.1
2,260,796	-		Synpcc7942_2181	0.67	-2.4
2,260,827	+		Synpcc7942_2181	0.70	-3.7
2,260,845	-		Synpcc7942_2181	0.71	-3.6
2,260,980	-		Synpcc7942_2181	0.83	-3.1
2,260,993	-		Synpcc7942_2181	0.84	-2.4
2,260,997	+		Synpcc7942_2181	0.84	-1.1
2,260,997	+		Synpcc7942_2181	0.84	-2.2
2,261,005	-		Synpcc7942_2181	0.85	-0.7
2,261,024	+		Synpcc7942_2181	0.86	-1.6
2,261,051	-		Synpcc7942_2181	0.88	-3.2
2,261,051	-		Synpcc7942_2181	0.88	-3.3
2,261,096	-				-2.2
2,261,145	-				-3.5
2,261,164	-				-0.5
2,261,183	+				+0.9
2,261,187	+				-1.0
2,261,194	+				-0.9
2,261,256	+				+0.1
2,261,341	+		Synpcc7942_2182	0.52	-1.3
2,261,348	+		Synpcc7942_2182	0.56	+0.4
2,261,356	-		Synpcc7942_2182	0.60	+0.1
2,261,431	+				+0.2
2,261,431	+				-0.6
2,261,433	+				+0.4
2,261,519	+				+1.6
2,261,527	-				-1.2
2,261,527	-				+0.2
2,261,537	-				+1.3
2,261,553	+				+0.9
2,261,555	+				-1.8
2,261,561	-				-0.1
2,261,593	+				-0.1
2,261,612	+				+0.1
2,261,615	+				+0.2
2,261,667	-	rnhA	Synpcc7942_2183	0.14	-0.2
2,261,674	+	rnhA	Synpcc7942_2183	0.15	+0.6
2,261,675	+	rnhA	Synpcc7942_2183	0.15	-0.2
2,261,681	+	rnhA	Synpcc7942_2183	0.16	+0.3
2,261,698	-	rnhA	Synpcc7942_2183	0.18	+0.1
2,261,698	-	rnhA	Synpcc7942_2183	0.18	+0.2
2,261,756	-	rnhA	Synpcc7942_2183	0.26	-0.7
2,261,773	-	rnhA	Synpcc7942_2183	0.28	-0.1
2,261,785	+	rnhA	Synpcc7942_2183	0.29	-0.3
2,261,786	+	rnhA	Synpcc7942_2183	0.29	+0.8
2,261,791	+	rnhA	Synpcc7942_2183	0.30	+0.2
2,261,798	+	rnhA	Synpcc7942_2183	0.31	+0.5
2,261,801	-	rnhA	Synpcc7942_2183	0.31	-1.7
2,261,801	-	rnhA	Synpcc7942_2183	0.31	+0.7
2,261,810	+	rnhA	Synpcc7942_2183	0.33	+0.3
2,261,846	+	rnhA	Synpcc7942_2183	0.37	+1.5
2,261,908	-	rnhA	Synpcc7942_2183	0.45	-1.1
2,261,970	+	rnhA	Synpcc7942_2183	0.53	+0.0
2,261,970	+	rnhA	Synpcc7942_2183	0.53	-0.9
2,261,978	-	rnhA	Synpcc7942_2183	0.54	+0.2
2,261,983	+	rnhA	Synpcc7942_2183	0.55	-0.9
2,261,996	+	rnhA	Synpcc7942_2183	0.56	-0.2
2,262,024	+	rnhA	Synpcc7942_2183	0.60	-1.2
2,262,031	+	rnhA	Synpcc7942_2183	0.61	-0.9
2,262,031	+	rnhA	Synpcc7942_2183	0.61	-0.4
2,262,063	-	rnhA	Synpcc7942_2183	0.65	-1.5
2,262,071	+	rnhA	Synpcc7942_2183	0.66	-0.8
2,262,071	-	rnhA	Synpcc7942_2183	0.66	+0.4
2,262,077	+	rnhA	Synpcc7942_2183	0.67	+0.8
2,262,077	+	rnhA	Synpcc7942_2183	0.67	+0.4
2,262,085	-	rnhA	Synpcc7942_2183	0.68	+0.6
2,262,085	-	rnhA	Synpcc7942_2183	0.68	+1.0
2,262,088	-	rnhA	Synpcc7942_2183	0.68	-0.5
2,262,091	+	rnhA	Synpcc7942_2183	0.69	+0.0
2,262,115	+	rnhA	Synpcc7942_2183	0.72	-0.9
2,262,123	-	rnhA	Synpcc7942_2183	0.73	+0.0
2,262,123	-	rnhA	Synpcc7942_2183	0.73	+0.3
2,262,125	-	rnhA	Synpcc7942_2183	0.73	-0.8
2,262,140	-	rnhA	Synpcc7942_2183	0.75	-1.1
2,262,159	+	rnhA	Synpcc7942_2183	0.77	-1.9