Strain Fitness in Synechococcus elongatus PCC 7942 around Synpcc7942_2145

Experiment: BG11 with Cisplatin 0.05 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	BG11 with Cisplatin 0.05 mg/ml
2,228,180	+				+0.2
2,228,215	-				-0.4
2,228,215	-				+0.2
2,228,222	+				-1.2
2,228,254	-				-0.1
2,228,259	-				-0.1
2,228,276	-				+0.4
2,228,314	+				-1.3
2,228,320	-				+0.1
2,228,322	+				-0.5
2,228,365	+				-0.3
2,228,368	-				-1.3
2,228,368	-				+0.7
2,228,381	-				-1.6
2,228,446	-				-0.5
2,228,452	+				+0.5
2,228,453	+				-0.1
2,228,461	-				+0.1
2,228,499	+				+0.1
2,228,499	+				+0.1
2,228,504	+				-0.5
2,228,507	-				+0.7
2,228,521	+				+0.5
2,228,526	+				+0.1
2,228,534	+				-0.6
2,228,534	-				-0.2
2,228,554	-				-1.7
2,228,591	-		Synpcc7942_2144	0.13	-0.6
2,228,612	-		Synpcc7942_2144	0.17	-0.6
2,228,628	+		Synpcc7942_2144	0.20	-1.1
2,228,743	-		Synpcc7942_2144	0.44	-1.0
2,228,743	-				+0.5
2,228,750	-		Synpcc7942_2144	0.45	-1.8
2,228,750	-		Synpcc7942_2144	0.45	+0.2
2,228,763	+		Synpcc7942_2144	0.48	+0.9
2,228,784	+		Synpcc7942_2144	0.52	+0.2
2,228,793	+		Synpcc7942_2144	0.54	-1.1
2,228,817	+		Synpcc7942_2144	0.59	-0.3
2,228,840	+		Synpcc7942_2144	0.64	-0.1
2,228,845	+		Synpcc7942_2144	0.65	-2.1
2,228,845	+				-0.2
2,228,848	-		Synpcc7942_2144	0.65	-0.6
2,228,853	-		Synpcc7942_2144	0.66	-0.8
2,228,859	+		Synpcc7942_2144	0.67	-1.2
2,228,895	+		Synpcc7942_2144	0.75	+0.4
2,228,905	+		Synpcc7942_2144	0.77	+1.1
2,228,905	+		Synpcc7942_2144	0.77	+0.3
2,228,913	-		Synpcc7942_2144	0.79	+0.7
2,228,913	-		Synpcc7942_2144	0.79	-1.5
2,228,913	-		Synpcc7942_2144	0.79	+0.4
2,228,913	-		Synpcc7942_2144	0.79	-0.2
2,228,934	+		Synpcc7942_2144	0.83	-0.5
2,228,962	-		Synpcc7942_2144	0.89	-0.8
2,228,978	+				+1.1
2,229,007	+				-0.9
2,229,014	+				-0.4
2,229,028	-				-0.7
2,229,251	-		Synpcc7942_2145	0.26	+0.9
2,229,340	-		Synpcc7942_2145	0.36	-1.4
2,229,434	-		Synpcc7942_2145	0.46	-1.6
2,229,646	+		Synpcc7942_2145	0.70	-1.0
2,229,687	+		Synpcc7942_2145	0.75	-1.4
2,229,697	-		Synpcc7942_2145	0.76	-1.3
2,229,697	-		Synpcc7942_2145	0.76	-1.6
2,229,914	-				+0.1
2,229,916	+				-0.5
2,229,923	+				+0.3
2,229,926	-				+0.2
2,229,931	-				+0.3
2,229,934	-				-0.5
2,229,936	-				-0.2
2,229,970	+				-0.5
2,229,997	-				-0.2
2,230,037	+				-0.2
2,230,067	-		Synpcc7942_2146	0.18	+0.8
2,230,101	-		Synpcc7942_2146	0.29	-2.7
2,230,114	-		Synpcc7942_2146	0.33	-1.5
2,230,124	-		Synpcc7942_2146	0.37	-1.4
2,230,126	-		Synpcc7942_2146	0.37	-1.1
2,230,176	+		Synpcc7942_2146	0.53	-0.2
2,230,182	-		Synpcc7942_2146	0.55	-1.1
2,230,192	-		Synpcc7942_2146	0.58	-0.1
2,230,249	+		Synpcc7942_2146	0.76	-0.3
2,230,256	+		Synpcc7942_2146	0.78	-2.4
2,230,266	+		Synpcc7942_2146	0.82	-0.1
2,230,266	+		Synpcc7942_2146	0.82	-0.1
2,230,275	+		Synpcc7942_2146	0.84	-0.9
2,230,277	-		Synpcc7942_2146	0.85	-0.1
2,230,310	+				+0.7
2,230,395	+		Synpcc7942_2147	0.19	-0.1
2,230,395	-		Synpcc7942_2147	0.19	+1.1
2,230,397	+		Synpcc7942_2147	0.20	-0.8
2,230,397	+		Synpcc7942_2147	0.20	+0.7
2,230,397	+		Synpcc7942_2147	0.20	+0.0
2,230,397	+		Synpcc7942_2147	0.20	+0.3
2,230,405	-		Synpcc7942_2147	0.22	-1.2
2,230,405	-		Synpcc7942_2147	0.22	-0.2
2,230,421	+		Synpcc7942_2147	0.26	-0.9
2,230,421	+		Synpcc7942_2147	0.26	-1.5
2,230,421	+		Synpcc7942_2147	0.26	-0.1
2,230,423	+		Synpcc7942_2147	0.26	-1.6
2,230,431	-		Synpcc7942_2147	0.28	-0.7
2,230,434	+		Synpcc7942_2147	0.29	-0.6
2,230,468	+				+0.5
2,230,476	-		Synpcc7942_2147	0.39	-0.1
2,230,502	+		Synpcc7942_2147	0.45	-0.9
2,230,510	-		Synpcc7942_2147	0.47	-1.1
2,230,538	+		Synpcc7942_2147	0.54	-1.4
2,230,573	+				+0.8
2,230,622	+		Synpcc7942_2147	0.74	+0.6
2,230,633	-		Synpcc7942_2147	0.77	-0.6
2,230,643	-		Synpcc7942_2147	0.80	+0.7
2,230,668	+		Synpcc7942_2147	0.86	+0.1
2,230,695	+				-1.3
2,230,722	-				-0.8
2,230,736	-				-0.5
2,230,740	-				-2.9
2,230,756	-				-1.4
2,230,764	+				-0.6
2,230,767	-				-1.2
2,230,772	-				-1.4
2,230,772	-				+0.3
2,230,777	+				-2.0
2,230,777	+				-0.2