Strain Fitness in Synechococcus elongatus PCC 7942 around Synpcc7942_2131

Experiment: BG11 with Cisplatin 0.05 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	BG11 with Cisplatin 0.05 mg/ml
2,208,274	-		Synpcc7942_2129	0.30	-2.4
2,208,353	+		Synpcc7942_2129	0.49	-1.2
2,208,361	-		Synpcc7942_2129	0.51	-3.3
2,208,422	+		Synpcc7942_2129	0.66	-3.2
2,208,422	+		Synpcc7942_2129	0.66	-1.3
2,208,422	+		Synpcc7942_2129	0.66	-2.1
2,208,430	-		Synpcc7942_2129	0.68	-1.7
2,208,430	-		Synpcc7942_2129	0.68	-2.0
2,208,500	-		Synpcc7942_2129	0.85	-3.1
2,208,502	+		Synpcc7942_2129	0.86	-3.9
2,208,508	+		Synpcc7942_2129	0.87	-2.7
2,208,521	-				-0.9
2,208,525	-				-3.0
2,208,527	+				-1.6
2,208,906	-		Synpcc7942_2130	0.58	+1.5
2,208,960	+		Synpcc7942_2130	0.67	-0.8
2,208,989	+		Synpcc7942_2130	0.72	-0.2
2,209,010	-		Synpcc7942_2130	0.76	-0.7
2,209,016	-		Synpcc7942_2130	0.77	+0.3
2,209,030	-		Synpcc7942_2130	0.79	+0.5
2,209,037	+		Synpcc7942_2130	0.81	-0.4
2,209,050	-		Synpcc7942_2130	0.83	+0.7
2,209,075	+		Synpcc7942_2130	0.87	-0.6
2,209,117	+				-0.4
2,209,157	+				-0.8
2,209,189	+				+0.1
2,209,189	+				+0.2
2,209,217	-				+0.8
2,209,276	-				-2.5
2,209,326	+				-2.0
2,209,392	-	slt	Synpcc7942_2131	0.10	-1.3
2,209,461	-	slt	Synpcc7942_2131	0.13	-0.7
2,209,525	+	slt	Synpcc7942_2131	0.16	-2.8
2,209,562	+	slt	Synpcc7942_2131	0.18	-0.8
2,209,591	+	slt	Synpcc7942_2131	0.20	-1.9
2,209,598	+	slt	Synpcc7942_2131	0.20	-1.3
2,209,640	-	slt	Synpcc7942_2131	0.22	-2.9
2,209,664	+	slt	Synpcc7942_2131	0.23	-2.6
2,209,672	-	slt	Synpcc7942_2131	0.24	-2.2
2,209,724	+	slt	Synpcc7942_2131	0.26	-2.4
2,209,724	+	slt	Synpcc7942_2131	0.26	-0.8
2,209,724	+	slt	Synpcc7942_2131	0.26	-2.0
2,209,724	+	slt	Synpcc7942_2131	0.26	-1.9
2,209,724	+	slt	Synpcc7942_2131	0.26	-0.1
2,209,732	-	slt	Synpcc7942_2131	0.26	-3.3
2,209,732	-	slt	Synpcc7942_2131	0.26	-1.8
2,209,760	+	slt	Synpcc7942_2131	0.28	-1.9
2,209,776	-	slt	Synpcc7942_2131	0.29	-0.6
2,209,817	+	slt	Synpcc7942_2131	0.31	-0.4
2,209,818	+	slt	Synpcc7942_2131	0.31	-0.8
2,209,832	-	slt	Synpcc7942_2131	0.31	-1.3
2,209,855	-	slt	Synpcc7942_2131	0.32	-0.8
2,209,864	+	slt	Synpcc7942_2131	0.33	+0.4
2,209,865	+	slt	Synpcc7942_2131	0.33	-0.3
2,209,873	-	slt	Synpcc7942_2131	0.33	-2.2
2,209,884	-	slt	Synpcc7942_2131	0.34	-2.3
2,209,894	-	slt	Synpcc7942_2131	0.34	-0.9
2,209,903	+	slt	Synpcc7942_2131	0.35	-1.4
2,209,950	-	slt	Synpcc7942_2131	0.37	-1.1
2,209,970	+	slt	Synpcc7942_2131	0.38	-0.8
2,209,975	+	slt	Synpcc7942_2131	0.38	-1.2
2,209,975	+	slt	Synpcc7942_2131	0.38	-1.3
2,210,025	+	slt	Synpcc7942_2131	0.41	-2.3
2,210,098	-	slt	Synpcc7942_2131	0.44	-1.9
2,210,098	-	slt	Synpcc7942_2131	0.44	-1.3
2,210,140	+	slt	Synpcc7942_2131	0.46	-2.5
2,210,163	-	slt	Synpcc7942_2131	0.47	-0.9
2,210,209	+	slt	Synpcc7942_2131	0.49	-0.8
2,210,209	+	slt	Synpcc7942_2131	0.49	-1.9
2,210,290	+	slt	Synpcc7942_2131	0.53	-2.1
2,210,290	+	slt	Synpcc7942_2131	0.53	-2.0
2,210,298	-	slt	Synpcc7942_2131	0.54	-1.7
2,210,298	-	slt	Synpcc7942_2131	0.54	-3.6
2,210,298	-	slt	Synpcc7942_2131	0.54	-2.6
2,210,298	-	slt	Synpcc7942_2131	0.54	-1.3
2,210,298	-	slt	Synpcc7942_2131	0.54	-0.9
2,210,298	-	slt	Synpcc7942_2131	0.54	-0.7
2,210,334	+	slt	Synpcc7942_2131	0.56	-0.5
2,210,334	-	slt	Synpcc7942_2131	0.56	-1.5
2,210,361	+	slt	Synpcc7942_2131	0.57	-4.3
2,210,362	+	slt	Synpcc7942_2131	0.57	-1.2
2,210,362	+	slt	Synpcc7942_2131	0.57	-2.6
2,210,376	-	slt	Synpcc7942_2131	0.58	-3.2
2,210,388	-	slt	Synpcc7942_2131	0.58	-1.0
2,210,389	-	slt	Synpcc7942_2131	0.58	-2.3
2,210,404	+	slt	Synpcc7942_2131	0.59	+0.1
2,210,439	-	slt	Synpcc7942_2131	0.61	-0.0
2,210,441	-	slt	Synpcc7942_2131	0.61	-1.3
2,210,450	+	slt	Synpcc7942_2131	0.61	-2.3
2,210,464	+	slt	Synpcc7942_2131	0.62	-2.8
2,210,469	+	slt	Synpcc7942_2131	0.62	-1.1
2,210,469	+	slt	Synpcc7942_2131	0.62	-0.8
2,210,469	+	slt	Synpcc7942_2131	0.62	-1.6
2,210,472	-	slt	Synpcc7942_2131	0.62	-3.0
2,210,477	-	slt	Synpcc7942_2131	0.62	-3.0
2,210,496	+	slt	Synpcc7942_2131	0.63	+0.2
2,210,504	-	slt	Synpcc7942_2131	0.64	-2.1
2,210,514	-	slt	Synpcc7942_2131	0.64	-3.0
2,210,522	+	slt	Synpcc7942_2131	0.65	-1.4
2,210,556	-	slt	Synpcc7942_2131	0.66	-2.1
2,210,559	+	slt	Synpcc7942_2131	0.66	+0.0
2,210,583	+	slt	Synpcc7942_2131	0.68	-3.0
2,210,600	+	slt	Synpcc7942_2131	0.68	-1.1
2,210,620	-	slt	Synpcc7942_2131	0.69	-0.7
2,210,639	+	slt	Synpcc7942_2131	0.70	-2.6
2,210,727	+	slt	Synpcc7942_2131	0.74	-2.0
2,210,735	-	slt	Synpcc7942_2131	0.75	-0.5
2,210,787	+	slt	Synpcc7942_2131	0.77	-1.2
2,210,787	+	slt	Synpcc7942_2131	0.77	+0.3
2,210,797	-	slt	Synpcc7942_2131	0.78	-0.6
2,210,804	+	slt	Synpcc7942_2131	0.78	-1.3
2,210,812	-	slt	Synpcc7942_2131	0.79	-1.8
2,210,814	+	slt	Synpcc7942_2131	0.79	-2.2
2,210,814	+	slt	Synpcc7942_2131	0.79	-1.8
2,210,817	-	slt	Synpcc7942_2131	0.79	-1.0
2,210,834	+	slt	Synpcc7942_2131	0.80	-2.8
2,210,834	+	slt	Synpcc7942_2131	0.80	-3.2
2,210,834	+	slt	Synpcc7942_2131	0.80	-1.0
2,210,834	+	slt	Synpcc7942_2131	0.80	-0.5
2,210,842	-	slt	Synpcc7942_2131	0.80	-2.2
2,210,848	+	slt	Synpcc7942_2131	0.80	-0.9
2,210,872	+	slt	Synpcc7942_2131	0.81	-2.6
2,210,899	+	slt	Synpcc7942_2131	0.83	-2.0
2,210,899	+	slt	Synpcc7942_2131	0.83	-3.4
2,210,899	+	slt	Synpcc7942_2131	0.83	-1.8
2,210,909	-	slt	Synpcc7942_2131	0.83	-2.6
2,210,910	+	slt	Synpcc7942_2131	0.83	-1.2
2,210,915	-	slt	Synpcc7942_2131	0.84	-1.3
2,210,923	-	slt	Synpcc7942_2131	0.84	-0.9
2,210,927	+	slt	Synpcc7942_2131	0.84	-2.2
2,210,932	+	slt	Synpcc7942_2131	0.84	-1.8
2,210,933	-	slt	Synpcc7942_2131	0.84	-0.9
2,210,937	+	slt	Synpcc7942_2131	0.85	-1.6
2,210,937	+	slt	Synpcc7942_2131	0.85	-2.3
2,210,945	-	slt	Synpcc7942_2131	0.85	-1.5
2,210,945	-	slt	Synpcc7942_2131	0.85	-1.5
2,210,945	-	slt	Synpcc7942_2131	0.85	-2.0
2,210,955	-	slt	Synpcc7942_2131	0.85	-2.9
2,210,966	+	slt	Synpcc7942_2131	0.86	-0.9
2,210,971	+	slt	Synpcc7942_2131	0.86	-2.4
2,210,976	+	slt	Synpcc7942_2131	0.86	-1.0
2,210,976	+	slt	Synpcc7942_2131	0.86	-2.8
2,210,976	+	slt	Synpcc7942_2131	0.86	-0.8
2,210,979	-	slt	Synpcc7942_2131	0.87	-2.3
2,210,984	-	slt	Synpcc7942_2131	0.87	-1.4
2,210,984	-	slt	Synpcc7942_2131	0.87	-0.2
2,210,989	+	slt	Synpcc7942_2131	0.87	-0.5
2,211,013	+	slt	Synpcc7942_2131	0.88	-0.9
2,211,031	+	slt	Synpcc7942_2131	0.89	-1.1
2,211,055	+				-1.4
2,211,055	+				-1.1
2,211,065	+				-3.0
2,211,096	+				-5.1
2,211,096	+				-1.9
2,211,263	+				-0.2
2,211,263	+				+1.8
2,211,271	-				+1.1
2,211,304	-				-0.5
2,211,307	-				-0.3
2,211,310	+				+0.6
2,211,374	-				-2.1
2,211,395	-				-0.2
2,211,395	-				-0.7
2,211,422	+				-0.7
2,211,422	+				-2.3
2,211,423	-				-1.4
2,211,423	-				-1.9
2,211,442	+				-0.7
2,211,450	-				-1.0
2,211,453	-				-2.9
2,211,465	+				-1.2
2,211,495	-				+0.4
2,211,534	+				-1.2
2,211,540	-				-0.9
2,211,540	-				-0.8
2,211,542	-				+0.0
2,211,547	-				+0.1
2,211,591	+				-0.2
2,211,599	-				-0.2
2,211,626	+				-0.0
2,211,730	-	manB	Synpcc7942_2132	0.13	-0.7
2,211,730	-	manB	Synpcc7942_2132	0.13	-1.1
2,211,799	+	manB	Synpcc7942_2132	0.18	-1.5
2,211,891	-	manB	Synpcc7942_2132	0.24	-0.6
2,212,053	+	manB	Synpcc7942_2132	0.36	-2.2
2,212,204	+	manB	Synpcc7942_2132	0.46	-1.9