Strain Fitness in Synechococcus elongatus PCC 7942 around Synpcc7942_2076

Experiment: BG11 with Cisplatin 0.05 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	BG11 with Cisplatin 0.05 mg/ml
2,153,149	-	dnaJ1	Synpcc7942_2074	0.45	-0.0
2,153,449	-	dnaJ1	Synpcc7942_2074	0.72	-1.5
2,153,451	+	dnaJ1	Synpcc7942_2074	0.72	-2.7
2,153,484	-	dnaJ1	Synpcc7942_2074	0.75	-0.5
2,153,522	+	dnaJ1	Synpcc7942_2074	0.78	+0.8
2,153,580	+	dnaJ1	Synpcc7942_2074	0.83	-1.8
2,153,580	+	dnaJ1	Synpcc7942_2074	0.83	-1.4
2,153,580	+	dnaJ1	Synpcc7942_2074	0.83	-1.1
2,153,729	-				+0.3
2,154,008	-				-2.3
2,154,031	-				+0.1
2,154,058	+				-4.1
2,154,058	+				-3.1
2,154,058	+				-1.8
2,154,066	-				-4.1
2,154,079	-				-2.2
2,154,150	+	rsgA	Synpcc7942_2076	0.13	-1.3
2,154,151	-	rsgA	Synpcc7942_2076	0.13	-1.5
2,154,192	+	rsgA	Synpcc7942_2076	0.17	-2.2
2,154,250	-	rsgA	Synpcc7942_2076	0.22	-4.3
2,154,315	+	rsgA	Synpcc7942_2076	0.29	-1.6
2,154,354	+	rsgA	Synpcc7942_2076	0.32	-2.3
2,154,360	+	rsgA	Synpcc7942_2076	0.33	-1.2
2,154,360	+	rsgA	Synpcc7942_2076	0.33	-2.1
2,154,360	+	rsgA	Synpcc7942_2076	0.33	-3.9
2,154,360	+	rsgA	Synpcc7942_2076	0.33	-2.9
2,154,365	+	rsgA	Synpcc7942_2076	0.33	-2.7
2,154,365	+	rsgA	Synpcc7942_2076	0.33	-2.5
2,154,368	-	rsgA	Synpcc7942_2076	0.34	-3.4
2,154,455	-	rsgA	Synpcc7942_2076	0.42	-0.3
2,154,464	+	rsgA	Synpcc7942_2076	0.43	-3.1
2,154,472	-	rsgA	Synpcc7942_2076	0.43	-0.9
2,154,582	+	rsgA	Synpcc7942_2076	0.54	-2.1
2,154,604	+	rsgA	Synpcc7942_2076	0.56	-2.0
2,154,615	+	rsgA	Synpcc7942_2076	0.57	-2.9
2,154,616	+	rsgA	Synpcc7942_2076	0.57	-4.1
2,154,664	+	rsgA	Synpcc7942_2076	0.62	-3.4
2,154,673	-	rsgA	Synpcc7942_2076	0.63	-2.0
2,154,715	+	rsgA	Synpcc7942_2076	0.67	-4.1
2,154,718	-	rsgA	Synpcc7942_2076	0.67	-2.6
2,154,723	-	rsgA	Synpcc7942_2076	0.67	-2.1
2,154,826	+	rsgA	Synpcc7942_2076	0.77	-4.1
2,155,037	+				-1.6
2,155,047	+				-0.9
2,155,055	-				-0.6
2,155,092	-				+0.8
2,155,157	+				+1.1
2,155,158	-				+0.7
2,155,165	-				-0.5
2,155,170	-				-1.6
2,155,177	-		Synpcc7942_2077	0.11	-0.1
2,155,178	+		Synpcc7942_2077	0.11	+0.4
2,155,188	+		Synpcc7942_2077	0.13	-0.3
2,155,193	+		Synpcc7942_2077	0.14	+0.4
2,155,317	+		Synpcc7942_2077	0.44	-0.0
2,155,338	+		Synpcc7942_2077	0.49	-0.6
2,155,372	+		Synpcc7942_2077	0.57	-0.2
2,155,409	+		Synpcc7942_2077	0.66	+0.5
2,155,448	+				+0.5
2,155,456	+		Synpcc7942_2077	0.77	-0.3
2,155,473	+		Synpcc7942_2077	0.82	-0.6
2,155,498	-		Synpcc7942_2077	0.88	-0.2
2,155,520	+				+0.5
2,155,539	+				+0.2
2,155,551	-				-0.6
2,155,559	+				+0.5
2,155,559	+				-0.4
2,155,572	+				-1.8
2,155,616	+				-0.1
2,155,776	+				-0.0
2,155,776	+				-0.8
2,155,776	+				-0.7
2,155,776	+				+0.8
2,155,776	+				+0.7
2,155,776	+				-1.9
2,155,776	+				+0.1
2,155,776	+				+0.2
2,155,778	+				+0.4
2,155,784	-				+0.2
2,155,784	-				+0.3
2,155,784	-				-0.6
2,155,785	-				+0.4
2,155,786	-				+0.0
2,155,788	+				-0.6
2,155,790	+				+0.6
2,155,791	-				+0.3
2,155,798	-				-0.6
2,155,813	+				+0.1
2,155,817	-				-0.1
2,155,821	-				-0.1
2,155,878	+				-3.2
2,155,919	+				+0.2
2,155,991	-	pgam	Synpcc7942_2078	0.10	+0.2
2,155,994	+	pgam	Synpcc7942_2078	0.10	-0.3
2,156,016	+	pgam	Synpcc7942_2078	0.14	-1.8
2,156,032	+	pgam	Synpcc7942_2078	0.16	+0.3