Strain Fitness in Synechococcus elongatus PCC 7942 around Synpcc7942_2009

Experiment: BG11 with Cisplatin 0.05 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	BG11 with Cisplatin 0.05 mg/ml
2,075,800	+				+0.8
2,075,820	-				+0.0
2,075,838	+				-0.7
2,075,839	+				+0.4
2,075,839	+				-1.3
2,075,839	+				-0.2
2,075,846	+				-0.9
2,075,846	-				+0.1
2,075,847	-				+0.7
2,075,875	-				+0.4
2,075,920	+		Synpcc7942_2008	0.10	-1.0
2,075,920	+		Synpcc7942_2008	0.10	-1.5
2,075,920	+		Synpcc7942_2008	0.10	+0.4
2,075,920	+		Synpcc7942_2008	0.10	-0.1
2,075,920	+		Synpcc7942_2008	0.10	-0.2
2,075,920	+		Synpcc7942_2008	0.10	+0.5
2,075,920	+		Synpcc7942_2008	0.10	+0.6
2,075,922	+		Synpcc7942_2008	0.11	-0.3
2,075,928	-		Synpcc7942_2008	0.12	-0.2
2,075,928	-		Synpcc7942_2008	0.12	-0.3
2,075,928	-		Synpcc7942_2008	0.12	-1.3
2,075,928	-		Synpcc7942_2008	0.12	-0.1
2,075,928	-		Synpcc7942_2008	0.12	+1.3
2,075,951	+		Synpcc7942_2008	0.17	+0.4
2,075,954	+		Synpcc7942_2008	0.17	+0.8
2,075,962	-		Synpcc7942_2008	0.19	-0.1
2,075,967	+		Synpcc7942_2008	0.20	-0.2
2,075,970	-		Synpcc7942_2008	0.20	-0.0
2,075,979	+		Synpcc7942_2008	0.22	-0.0
2,076,009	+		Synpcc7942_2008	0.29	-0.5
2,076,011	-		Synpcc7942_2008	0.29	+0.1
2,076,040	+		Synpcc7942_2008	0.35	-0.1
2,076,050	+		Synpcc7942_2008	0.37	+0.1
2,076,050	+		Synpcc7942_2008	0.37	-0.6
2,076,053	-		Synpcc7942_2008	0.38	-0.5
2,076,082	+		Synpcc7942_2008	0.44	-1.4
2,076,101	+		Synpcc7942_2008	0.48	+0.3
2,076,167	-		Synpcc7942_2008	0.61	+0.3
2,076,170	+		Synpcc7942_2008	0.62	+0.5
2,076,196	+		Synpcc7942_2008	0.67	-0.9
2,076,207	+				+1.1
2,076,207	+		Synpcc7942_2008	0.70	+0.1
2,076,215	-		Synpcc7942_2008	0.71	-0.9
2,076,220	-		Synpcc7942_2008	0.72	-1.5
2,076,226	+		Synpcc7942_2008	0.73	-0.3
2,076,227	-		Synpcc7942_2008	0.74	-1.6
2,076,236	+		Synpcc7942_2008	0.76	+0.9
2,076,249	-		Synpcc7942_2008	0.78	-0.0
2,076,264	+		Synpcc7942_2008	0.81	-0.1
2,076,264	+		Synpcc7942_2008	0.81	-0.6
2,076,291	+		Synpcc7942_2008	0.87	-0.9
2,076,299	-		Synpcc7942_2008	0.89	-1.1
2,076,357	-				-1.8
2,076,373	-				-0.8
2,076,384	+				-1.7
2,076,444	-				-3.0
2,076,503	+				-1.6
2,076,503	+				-3.9
2,076,511	-				-1.9
2,076,511	-				-2.4
2,076,556	+				-0.1
2,076,556	+				+0.3
2,076,557	+				-2.4
2,076,558	+				-1.1
2,076,573	+				-2.5
2,076,579	+				-2.5
2,076,581	-				-3.8
2,076,592	-				-0.8
2,076,606	+				-3.2
2,076,614	+				-1.3
2,076,617	-				-4.3
2,076,622	-				-1.3
2,076,627	+				-2.3
2,076,627	-				-2.0
2,076,663	+		Synpcc7942_2009	0.11	-1.3
2,076,731	+		Synpcc7942_2009	0.13	-1.0
2,076,749	+		Synpcc7942_2009	0.14	-1.9
2,076,749	+		Synpcc7942_2009	0.14	-2.2
2,076,757	-		Synpcc7942_2009	0.14	-1.1
2,076,786	+		Synpcc7942_2009	0.15	-2.0
2,076,846	+		Synpcc7942_2009	0.17	-1.7
2,076,872	-		Synpcc7942_2009	0.18	-3.2
2,076,902	+		Synpcc7942_2009	0.19	-2.1
2,076,903	+		Synpcc7942_2009	0.19	-3.4
2,076,903	+		Synpcc7942_2009	0.19	-2.7
2,076,910	+		Synpcc7942_2009	0.20	-0.9
2,076,918	-		Synpcc7942_2009	0.20	-0.7
2,076,918	-		Synpcc7942_2009	0.20	-2.1
2,076,931	-		Synpcc7942_2009	0.20	-4.0
2,076,951	+		Synpcc7942_2009	0.21	-2.3
2,076,969	-		Synpcc7942_2009	0.22	-0.4
2,076,970	+		Synpcc7942_2009	0.22	-1.1
2,076,987	+		Synpcc7942_2009	0.22	-1.7
2,076,987	+		Synpcc7942_2009	0.22	-1.6
2,077,020	+		Synpcc7942_2009	0.24	-0.1
2,077,020	+		Synpcc7942_2009	0.24	-3.1
2,077,020	+		Synpcc7942_2009	0.24	-3.7
2,077,020	+		Synpcc7942_2009	0.24	-1.1
2,077,028	-		Synpcc7942_2009	0.24	-2.7
2,077,046	+		Synpcc7942_2009	0.25	-1.2
2,077,123	+		Synpcc7942_2009	0.27	-2.6
2,077,134	+		Synpcc7942_2009	0.28	-0.9
2,077,152	-		Synpcc7942_2009	0.28	-2.1
2,077,172	-		Synpcc7942_2009	0.29	-3.3
2,077,192	-		Synpcc7942_2009	0.30	-1.2
2,077,192	-		Synpcc7942_2009	0.30	-2.1
2,077,192	-		Synpcc7942_2009	0.30	-2.0
2,077,287	-		Synpcc7942_2009	0.33	-1.6
2,077,321	-		Synpcc7942_2009	0.35	-3.0
2,077,335	+		Synpcc7942_2009	0.35	-1.5
2,077,338	-		Synpcc7942_2009	0.35	-4.1
2,077,387	+		Synpcc7942_2009	0.37	-2.3
2,077,457	+		Synpcc7942_2009	0.39	-2.5
2,077,480	-		Synpcc7942_2009	0.40	-1.7
2,077,512	+		Synpcc7942_2009	0.41	-1.3
2,077,546	+		Synpcc7942_2009	0.43	-1.6
2,077,565	+		Synpcc7942_2009	0.43	-1.6
2,077,596	+		Synpcc7942_2009	0.44	-4.2
2,077,605	+		Synpcc7942_2009	0.45	-3.5
2,077,608	+		Synpcc7942_2009	0.45	-2.7
2,077,610	+		Synpcc7942_2009	0.45	-1.6
2,077,611	+		Synpcc7942_2009	0.45	-2.1
2,077,613	-		Synpcc7942_2009	0.45	-1.7
2,077,616	-		Synpcc7942_2009	0.45	-1.1
2,077,616	-		Synpcc7942_2009	0.45	-2.4
2,077,675	-		Synpcc7942_2009	0.47	-1.6
2,077,675	-		Synpcc7942_2009	0.47	-2.6
2,077,675	-		Synpcc7942_2009	0.47	-1.3
2,077,690	+		Synpcc7942_2009	0.48	-2.1
2,077,698	-		Synpcc7942_2009	0.48	-2.8
2,077,737	-		Synpcc7942_2009	0.50	-2.9
2,077,737	-		Synpcc7942_2009	0.50	-1.1
2,077,767	-		Synpcc7942_2009	0.51	-1.9
2,077,775	-		Synpcc7942_2009	0.51	-0.7
2,077,798	-		Synpcc7942_2009	0.52	-3.2
2,077,800	-		Synpcc7942_2009	0.52	-2.1
2,077,800	-		Synpcc7942_2009	0.52	-2.3
2,077,800	-		Synpcc7942_2009	0.52	-0.6
2,077,808	-		Synpcc7942_2009	0.52	-1.4
2,077,808	-		Synpcc7942_2009	0.52	-3.2
2,077,832	-		Synpcc7942_2009	0.53	-2.1
2,077,837	-		Synpcc7942_2009	0.53	-0.2
2,077,857	+		Synpcc7942_2009	0.54	-2.9
2,077,858	-		Synpcc7942_2009	0.54	-0.5
2,077,865	-		Synpcc7942_2009	0.54	-2.5
2,077,902	-		Synpcc7942_2009	0.56	-2.3
2,077,909	+		Synpcc7942_2009	0.56	-2.3
2,077,970	+		Synpcc7942_2009	0.58	-2.5
2,077,973	-		Synpcc7942_2009	0.58	-1.8
2,078,200	-		Synpcc7942_2009	0.66	+0.7
2,078,209	+		Synpcc7942_2009	0.67	-1.3
2,078,258	+		Synpcc7942_2009	0.68	-2.8
2,078,263	+		Synpcc7942_2009	0.69	-1.2
2,078,271	-		Synpcc7942_2009	0.69	-0.5
2,078,284	+		Synpcc7942_2009	0.69	-1.8
2,078,327	+		Synpcc7942_2009	0.71	-2.0
2,078,354	-		Synpcc7942_2009	0.72	-0.1
2,078,367	+		Synpcc7942_2009	0.72	-1.6
2,078,369	+		Synpcc7942_2009	0.72	-3.1
2,078,408	-		Synpcc7942_2009	0.74	-2.1
2,078,411	+		Synpcc7942_2009	0.74	-2.2
2,078,462	-		Synpcc7942_2009	0.76	-1.9
2,078,484	+		Synpcc7942_2009	0.77	+0.1
2,078,571	+		Synpcc7942_2009	0.80	-2.1
2,078,578	+		Synpcc7942_2009	0.80	-1.1
2,078,591	-		Synpcc7942_2009	0.80	-0.6
2,078,660	+		Synpcc7942_2009	0.83	-2.0
2,078,677	+		Synpcc7942_2009	0.83	-3.9
2,078,733	+		Synpcc7942_2009	0.86	-2.3
2,078,738	+		Synpcc7942_2009	0.86	-1.8
2,078,746	-		Synpcc7942_2009	0.86	-1.5
2,078,793	-		Synpcc7942_2009	0.88	-1.9
2,078,819	+		Synpcc7942_2009	0.89	-0.1
2,078,819	+		Synpcc7942_2009	0.89	-2.7
2,078,819	+		Synpcc7942_2009	0.89	-0.8
2,078,829	+		Synpcc7942_2009	0.89	-2.0
2,078,829	+		Synpcc7942_2009	0.89	-2.3
2,078,878	+				-1.0
2,078,879	+				-0.6
2,078,888	-				-2.2
2,078,895	-				-3.0
2,078,910	+				-3.2
2,078,913	-				-2.5
2,078,918	-				-1.2
2,078,918	-				-2.3
2,079,046	-				-1.6
2,079,046	-				-2.1
2,079,046	-				-2.1
2,079,069	+				-2.4
2,079,081	+				-1.7
2,079,140	+				+1.3
2,079,148	-				+0.1
2,079,182	-				-0.5
2,079,242	+				-0.6
2,079,258	-				-0.7
2,079,304	+				-0.2
2,079,305	+				-0.0
2,079,333	+				-0.2
2,079,341	-				+0.7
2,079,356	-				+1.0
2,079,356	-				-0.3
2,079,379	-				-0.4
2,079,416	+				+0.9
2,079,469	+				+0.0
2,079,491	+				+0.4
2,079,505	-				-1.1