Strain Fitness in Synechococcus elongatus PCC 7942 around Synpcc7942_2006

Experiment: BG11 with Cisplatin 0.05 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	BG11 with Cisplatin 0.05 mg/ml
2,073,605	-				+0.9
2,073,607	+				-0.3
2,073,668	+				-1.2
2,073,673	+				+0.5
2,073,681	-				+0.4
2,073,682	-				+0.4
2,073,688	-				-0.2
2,073,703	-				+0.4
2,073,713	+		Synpcc7942_2005	0.10	+0.1
2,073,737	+				-0.7
2,073,742	+		Synpcc7942_2005	0.14	+1.3
2,073,745	-		Synpcc7942_2005	0.14	+1.4
2,073,752	-		Synpcc7942_2005	0.15	-0.1
2,073,764	-		Synpcc7942_2005	0.17	-1.6
2,073,821	+		Synpcc7942_2005	0.23	-1.7
2,073,835	+		Synpcc7942_2005	0.25	+0.3
2,073,855	-		Synpcc7942_2005	0.28	+0.3
2,073,858	+		Synpcc7942_2005	0.28	+0.9
2,073,861	-		Synpcc7942_2005	0.28	-0.7
2,073,936	-		Synpcc7942_2005	0.37	-0.8
2,073,939	+		Synpcc7942_2005	0.38	-0.3
2,073,952	+		Synpcc7942_2005	0.39	+1.0
2,073,960	-		Synpcc7942_2005	0.40	+0.9
2,073,960	-		Synpcc7942_2005	0.40	-0.4
2,073,981	-		Synpcc7942_2005	0.43	-0.0
2,074,007	+		Synpcc7942_2005	0.46	+0.1
2,074,014	-		Synpcc7942_2005	0.47	+2.1
2,074,028	+		Synpcc7942_2005	0.49	+0.9
2,074,030	+		Synpcc7942_2005	0.49	+0.2
2,074,051	+		Synpcc7942_2005	0.51	+0.3
2,074,051	+		Synpcc7942_2005	0.51	+0.6
2,074,124	+		Synpcc7942_2005	0.60	+0.9
2,074,124	+		Synpcc7942_2005	0.60	-0.3
2,074,124	+		Synpcc7942_2005	0.60	+1.4
2,074,124	+		Synpcc7942_2005	0.60	-0.7
2,074,124	+		Synpcc7942_2005	0.60	+0.1
2,074,132	-		Synpcc7942_2005	0.61	+0.9
2,074,132	-		Synpcc7942_2005	0.61	+1.4
2,074,132	-		Synpcc7942_2005	0.61	+0.1
2,074,138	+		Synpcc7942_2005	0.62	+0.2
2,074,206	-		Synpcc7942_2005	0.70	+0.4
2,074,224	+		Synpcc7942_2005	0.73	+0.8
2,074,232	-		Synpcc7942_2005	0.73	-1.1
2,074,279	+		Synpcc7942_2005	0.79	-0.7
2,074,316	+		Synpcc7942_2005	0.84	-0.4
2,074,334	-		Synpcc7942_2005	0.86	+0.3
2,074,339	-		Synpcc7942_2005	0.86	+0.3
2,074,373	-				-0.1
2,074,406	+				+0.9
2,074,451	-				+0.8
2,074,460	-				-1.2
2,074,470	-				+0.5
2,074,470	-				+1.8
2,074,482	+				-1.0
2,074,501	+				-1.0
2,074,501	+				+0.8
2,074,509	-				-0.1
2,074,509	-				-0.6
2,074,509	-				-0.5
2,074,509	-				+1.9
2,074,536	-				-1.8
2,074,538	+				-0.8
2,074,548	+				+0.3
2,074,548	+				-0.1
2,074,548	+				+0.2
2,074,548	+				-0.7
2,074,548	+				+0.1
2,074,550	+				+1.8
2,074,556	-				-1.3
2,074,556	-				-0.2
2,074,556	-				+0.2
2,074,575	-				-1.1
2,074,621	-				-1.3
2,074,662	+				-1.5
2,074,699	+	cdv3	Synpcc7942_2006	0.15	-1.5
2,074,707	-	cdv3	Synpcc7942_2006	0.16	-0.3
2,074,709	-	cdv3	Synpcc7942_2006	0.16	-2.3
2,074,731	-	cdv3	Synpcc7942_2006	0.19	-2.4
2,074,733	-	cdv3	Synpcc7942_2006	0.20	+0.0
2,074,791	-	cdv3	Synpcc7942_2006	0.28	-1.0
2,074,809	-	cdv3	Synpcc7942_2006	0.31	-1.7
2,074,885	+	cdv3	Synpcc7942_2006	0.42	-2.5
2,074,903	+	cdv3	Synpcc7942_2006	0.44	-1.0
2,074,909	-	cdv3	Synpcc7942_2006	0.45	-1.9
2,074,911	-	cdv3	Synpcc7942_2006	0.46	-3.2
2,074,937	+	cdv3	Synpcc7942_2006	0.49	-2.7
2,074,951	+	cdv3	Synpcc7942_2006	0.51	-1.7
2,074,967	+	cdv3	Synpcc7942_2006	0.54	-2.2
2,075,001	+	cdv3	Synpcc7942_2006	0.59	-1.6
2,075,014	-	cdv3	Synpcc7942_2006	0.61	-0.7
2,075,034	+	cdv3	Synpcc7942_2006	0.63	+0.1
2,075,116	-	cdv3	Synpcc7942_2006	0.75	-2.1
2,075,242	+				-0.7
2,075,242	+				-1.8
2,075,250	-				-1.3
2,075,250	-				-0.4
2,075,250	-				-0.2
2,075,250	-				-3.3
2,075,250	-				-0.7
2,075,252	+				-2.7
2,075,800	+				+0.8
2,075,820	-				+0.0
2,075,838	+				-0.7
2,075,839	+				+0.4
2,075,839	+				-1.3
2,075,839	+				-0.2
2,075,846	+				-0.9
2,075,846	-				+0.1
2,075,847	-				+0.7
2,075,875	-				+0.4
2,075,920	+		Synpcc7942_2008	0.10	-1.0
2,075,920	+		Synpcc7942_2008	0.10	-1.5
2,075,920	+		Synpcc7942_2008	0.10	+0.4
2,075,920	+		Synpcc7942_2008	0.10	-0.1
2,075,920	+		Synpcc7942_2008	0.10	-0.2
2,075,920	+		Synpcc7942_2008	0.10	+0.5
2,075,920	+		Synpcc7942_2008	0.10	+0.6
2,075,922	+		Synpcc7942_2008	0.11	-0.3
2,075,928	-		Synpcc7942_2008	0.12	-0.2
2,075,928	-		Synpcc7942_2008	0.12	-0.3
2,075,928	-		Synpcc7942_2008	0.12	-1.3
2,075,928	-		Synpcc7942_2008	0.12	-0.1
2,075,928	-		Synpcc7942_2008	0.12	+1.3
2,075,951	+		Synpcc7942_2008	0.17	+0.4
2,075,954	+		Synpcc7942_2008	0.17	+0.8
2,075,962	-		Synpcc7942_2008	0.19	-0.1
2,075,967	+		Synpcc7942_2008	0.20	-0.2
2,075,970	-		Synpcc7942_2008	0.20	-0.0
2,075,979	+		Synpcc7942_2008	0.22	-0.0
2,076,009	+		Synpcc7942_2008	0.29	-0.5
2,076,011	-		Synpcc7942_2008	0.29	+0.1
2,076,040	+		Synpcc7942_2008	0.35	-0.1
2,076,050	+		Synpcc7942_2008	0.37	+0.1
2,076,050	+		Synpcc7942_2008	0.37	-0.6
2,076,053	-		Synpcc7942_2008	0.38	-0.5
2,076,082	+		Synpcc7942_2008	0.44	-1.4
2,076,101	+		Synpcc7942_2008	0.48	+0.3
2,076,167	-		Synpcc7942_2008	0.61	+0.3
2,076,170	+		Synpcc7942_2008	0.62	+0.5
2,076,196	+		Synpcc7942_2008	0.67	-0.9
2,076,207	+				+1.1
2,076,207	+		Synpcc7942_2008	0.70	+0.1
2,076,215	-		Synpcc7942_2008	0.71	-0.9
2,076,220	-		Synpcc7942_2008	0.72	-1.5
2,076,226	+		Synpcc7942_2008	0.73	-0.3
2,076,227	-		Synpcc7942_2008	0.74	-1.6
2,076,236	+		Synpcc7942_2008	0.76	+0.9
2,076,249	-		Synpcc7942_2008	0.78	-0.0
2,076,264	+		Synpcc7942_2008	0.81	-0.1
2,076,264	+		Synpcc7942_2008	0.81	-0.6