Strain Fitness in Synechococcus elongatus PCC 7942 around Synpcc7942_2000

Experiment: BG11 with Cisplatin 0.05 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	BG11 with Cisplatin 0.05 mg/ml
2,066,968	-				+1.1
2,066,968	-		Synpcc7942_1998	0.70	-0.2
2,066,968	-		Synpcc7942_1998	0.70	-0.1
2,066,968	-		Synpcc7942_1998	0.70	+0.0
2,067,002	-		Synpcc7942_1998	0.76	-0.8
2,067,008	+		Synpcc7942_1998	0.77	-0.3
2,067,025	+		Synpcc7942_1998	0.80	+0.0
2,067,039	+		Synpcc7942_1998	0.82	+0.3
2,067,044	+		Synpcc7942_1998	0.83	-0.2
2,067,052	-		Synpcc7942_1998	0.84	+0.7
2,067,052	-		Synpcc7942_1998	0.84	-0.9
2,067,076	-		Synpcc7942_1998	0.88	-0.4
2,067,107	-				-0.4
2,067,112	+				-1.0
2,067,178	+				+0.1
2,067,210	+				+0.6
2,067,216	+				+0.7
2,067,223	-				+0.3
2,067,223	-				-0.8
2,067,225	-				-0.9
2,067,236	+				+0.2
2,067,244	-				+0.7
2,067,245	-				+0.1
2,067,246	+				-1.2
2,067,246	+				+1.0
2,067,251	+				-0.2
2,067,251	+				-0.2
2,067,251	+				-0.8
2,067,254	-				-0.1
2,067,259	-				-0.2
2,067,259	-				-2.9
2,067,284	-				-0.5
2,067,293	+				+0.5
2,067,330	-				+0.0
2,067,345	+				+0.2
2,067,345	+				+0.2
2,067,346	-				-1.4
2,067,348	-				+0.1
2,067,348	-				-0.9
2,067,350	+				-0.3
2,067,353	-				-0.5
2,067,378	-				-0.6
2,067,378	-				+0.8
2,067,405	+				-0.6
2,067,424	+				-0.7
2,067,432	-				+0.7
2,067,437	-				-0.9
2,067,447	-				-2.1
2,067,447	-				-0.4
2,067,465	-				-2.7
2,067,536	-	rbp2	Synpcc7942_1999	0.31	-2.9
2,067,545	-	rbp2	Synpcc7942_1999	0.34	-2.4
2,067,623	+	rbp2	Synpcc7942_1999	0.61	-1.8
2,067,659	+	rbp2	Synpcc7942_1999	0.73	-0.9
2,067,661	+	rbp2	Synpcc7942_1999	0.74	-1.1
2,067,667	-	rbp2	Synpcc7942_1999	0.76	-0.5
2,067,667	-	rbp2	Synpcc7942_1999	0.76	-1.2
2,067,800	-				-1.2
2,067,845	+				-2.5
2,067,935	+				-0.7
2,067,966	+				+0.5
2,067,966	+				+0.2
2,067,966	+				+1.4
2,067,966	+				-0.3
2,067,974	-				-0.8
2,067,974	-				+0.5
2,067,994	-				-2.4
2,068,122	-				-1.1
2,068,398	+	mrcB	Synpcc7942_2000	0.20	-2.7
2,068,629	-	mrcB	Synpcc7942_2000	0.30	-2.6
2,068,960	+	mrcB	Synpcc7942_2000	0.45	-1.2
2,069,006	-	mrcB	Synpcc7942_2000	0.47	-1.4
2,069,043	+	mrcB	Synpcc7942_2000	0.49	-1.7
2,069,083	-	mrcB	Synpcc7942_2000	0.51	-0.7
2,069,103	+	mrcB	Synpcc7942_2000	0.52	-0.5
2,069,207	+	mrcB	Synpcc7942_2000	0.56	-0.7
2,069,278	-	mrcB	Synpcc7942_2000	0.59	-2.5
2,069,405	-	mrcB	Synpcc7942_2000	0.65	-0.9
2,069,462	+	mrcB	Synpcc7942_2000	0.68	+0.1
2,069,492	-	mrcB	Synpcc7942_2000	0.69	-1.1
2,069,505	+	mrcB	Synpcc7942_2000	0.70	-0.5
2,069,515	+	mrcB	Synpcc7942_2000	0.70	-1.4
2,069,615	-	mrcB	Synpcc7942_2000	0.75	-1.4
2,069,676	+	mrcB	Synpcc7942_2000	0.77	-1.5
2,069,708	+				+0.5
2,069,718	+	mrcB	Synpcc7942_2000	0.79	-1.2
2,069,765	+	mrcB	Synpcc7942_2000	0.81	-0.4
2,069,778	-	mrcB	Synpcc7942_2000	0.82	-1.9
2,069,788	+	mrcB	Synpcc7942_2000	0.82	-0.5
2,069,796	+	mrcB	Synpcc7942_2000	0.83	-0.1
2,069,898	-	mrcB	Synpcc7942_2000	0.87	-0.5
2,069,937	+	mrcB	Synpcc7942_2000	0.89	-1.6
2,069,994	-				+0.6
2,070,026	-				-3.2
2,070,028	-				-1.2
2,070,028	-				-1.4
2,070,074	+				+0.6
2,070,084	+				-1.3
2,070,141	-				+1.1
2,070,142	+				-0.3
2,070,230	+				-0.6
2,070,240	+				+0.4
2,070,240	+				+0.1
2,070,240	+				-0.2
2,070,245	+				-0.0
2,070,245	+				-1.9
2,070,251	+				+1.1
2,070,253	-				-0.5
2,070,270	-				-0.0
2,070,279	+				-0.8
2,070,288	-				+0.3
2,070,292	+				+0.5
2,070,304	-				+0.5
2,070,383	-				-0.1
2,070,390	+				-2.0
2,070,417	+				-0.9
2,070,530	+	minC	Synpcc7942_2001	0.22	-0.2
2,070,538	-	minC	Synpcc7942_2001	0.23	+0.2
2,070,550	+	minC	Synpcc7942_2001	0.25	+0.9
2,070,552	-	minC	Synpcc7942_2001	0.25	-0.0
2,070,562	-	minC	Synpcc7942_2001	0.26	-1.1
2,070,583	-	minC	Synpcc7942_2001	0.29	-0.0
2,070,611	+	minC	Synpcc7942_2001	0.32	-0.9
2,070,666	-	minC	Synpcc7942_2001	0.39	+0.2
2,070,672	-	minC	Synpcc7942_2001	0.40	-0.7
2,070,672	-	minC	Synpcc7942_2001	0.40	+0.5
2,070,679	+	minC	Synpcc7942_2001	0.40	+0.8
2,070,687	-	minC	Synpcc7942_2001	0.41	-1.7
2,070,716	-	minC	Synpcc7942_2001	0.45	-0.1
2,070,734	+	minC	Synpcc7942_2001	0.47	-1.5
2,070,754	-	minC	Synpcc7942_2001	0.50	-1.1
2,070,785	+	minC	Synpcc7942_2001	0.53	-0.4
2,070,793	-	minC	Synpcc7942_2001	0.54	-0.3
2,070,795	-	minC	Synpcc7942_2001	0.55	-0.0
2,070,795	-	minC	Synpcc7942_2001	0.55	-0.2
2,070,795	-	minC	Synpcc7942_2001	0.55	-0.9
2,070,830	+	minC	Synpcc7942_2001	0.59	-0.2
2,070,833	-	minC	Synpcc7942_2001	0.59	-0.3
2,070,901	+	minC	Synpcc7942_2001	0.68	-0.8
2,070,901	+	minC	Synpcc7942_2001	0.68	-0.4
2,070,961	+	minC	Synpcc7942_2001	0.75	+1.6
2,071,054	-	minC	Synpcc7942_2001	0.86	-1.5
2,071,088	-				+0.1
2,071,135	+				+0.5
2,071,142	+				-0.2
2,071,142	+				-0.6
2,071,142	+				-1.0
2,071,150	-				+0.2
2,071,152	-				-0.8
2,071,172	-				-0.1
2,071,179	+				+0.0