Strain Fitness in Synechococcus elongatus PCC 7942 around Synpcc7942_1990

Experiment: BG11 with Cisplatin 0.05 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	BG11 with Cisplatin 0.05 mg/ml
2,059,993	-				-0.2
2,060,099	+		Synpcc7942_1989	0.21	+0.0
2,060,127	-		Synpcc7942_1989	0.24	-0.4
2,060,135	-		Synpcc7942_1989	0.25	-0.5
2,060,136	+		Synpcc7942_1989	0.25	+0.4
2,060,136	+		Synpcc7942_1989	0.25	-0.3
2,060,137	+		Synpcc7942_1989	0.25	+0.7
2,060,137	+		Synpcc7942_1989	0.25	+0.9
2,060,231	+		Synpcc7942_1989	0.36	+0.2
2,060,251	+		Synpcc7942_1989	0.38	-0.0
2,060,261	-		Synpcc7942_1989	0.39	-0.4
2,060,293	-		Synpcc7942_1989	0.42	+0.2
2,060,605	-		Synpcc7942_1989	0.77	-0.5
2,060,610	-		Synpcc7942_1989	0.77	-0.2
2,060,633	+		Synpcc7942_1989	0.80	-0.5
2,060,704	+		Synpcc7942_1989	0.87	-0.4
2,060,704	+		Synpcc7942_1989	0.87	+0.6
2,060,704	+		Synpcc7942_1989	0.87	+0.8
2,060,712	-		Synpcc7942_1989	0.88	+0.5
2,060,715	+		Synpcc7942_1989	0.89	-0.8
2,060,841	+				-0.0
2,060,841	+				-0.8
2,060,854	-				+0.1
2,060,918	-				-1.4
2,060,931	+				-2.8
2,060,947	+		Synpcc7942_1990	0.12	-2.5
2,060,990	-		Synpcc7942_1990	0.19	-1.8
2,061,023	+		Synpcc7942_1990	0.24	-2.5
2,061,039	-		Synpcc7942_1990	0.26	-1.5
2,061,163	-		Synpcc7942_1990	0.45	-2.6
2,061,205	-		Synpcc7942_1990	0.51	+0.9
2,061,355	+		Synpcc7942_1990	0.74	-0.7
2,061,360	+		Synpcc7942_1990	0.75	-1.1
2,061,360	+		Synpcc7942_1990	0.75	-2.5
2,061,368	-		Synpcc7942_1990	0.76	-0.4
2,061,370	+		Synpcc7942_1990	0.76	-3.1
2,061,378	-		Synpcc7942_1990	0.77	-2.1
2,061,474	+				-0.5
2,061,474	+				+0.6
2,061,482	-				-1.5
2,061,525	-				-2.3
2,061,917	+				+0.4
2,061,927	+				+0.1
2,061,936	-				+0.8
2,062,084	-	mscL	Synpcc7942_1991	0.41	+0.7
2,062,158	+	mscL	Synpcc7942_1991	0.59	+0.9
2,062,203	+	mscL	Synpcc7942_1991	0.70	-0.9
2,062,211	-	mscL	Synpcc7942_1991	0.72	+0.2
2,062,347	-				+0.1
2,062,358	+				-0.3
2,062,364	-				+0.5
2,062,365	-				-0.6
2,062,384	-				-2.5
2,062,390	+				-1.8
2,062,393	-				+0.4
2,062,408	-				+1.2
2,062,424	+				-0.7
2,062,424	+				+0.6
2,062,424	+				+0.2
2,062,434	+				+0.5
2,062,450	+				+0.6
2,062,477	-				+0.4