Strain Fitness in Synechococcus elongatus PCC 7942 around Synpcc7942_1969

Experiment: BG11 with Cisplatin 0.05 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	BG11 with Cisplatin 0.05 mg/ml
2,039,481	+		Synpcc7942_1968	0.59	+1.2
2,039,486	+		Synpcc7942_1968	0.59	+1.2
2,039,486	+		Synpcc7942_1968	0.59	+2.7
2,039,494	-		Synpcc7942_1968	0.60	+0.3
2,039,521	-		Synpcc7942_1968	0.62	-0.1
2,039,590	-		Synpcc7942_1968	0.67	+0.5
2,039,611	-		Synpcc7942_1968	0.68	+0.7
2,039,613	+		Synpcc7942_1968	0.68	+0.4
2,039,642	+		Synpcc7942_1968	0.70	+0.1
2,039,650	+		Synpcc7942_1968	0.71	+0.5
2,039,673	+		Synpcc7942_1968	0.73	+0.7
2,039,677	+		Synpcc7942_1968	0.73	+0.5
2,039,709	+		Synpcc7942_1968	0.75	+0.7
2,039,717	+		Synpcc7942_1968	0.76	+2.1
2,039,720	+		Synpcc7942_1968	0.76	+1.4
2,039,720	+		Synpcc7942_1968	0.76	+0.3
2,039,728	-		Synpcc7942_1968	0.77	+0.1
2,039,728	-		Synpcc7942_1968	0.77	-1.0
2,039,731	+		Synpcc7942_1968	0.77	+2.1
2,039,731	+		Synpcc7942_1968	0.77	+0.8
2,039,731	+		Synpcc7942_1968	0.77	+0.7
2,039,731	+		Synpcc7942_1968	0.77	+0.0
2,039,741	+		Synpcc7942_1968	0.78	+0.9
2,039,741	+		Synpcc7942_1968	0.78	-0.2
2,039,747	+		Synpcc7942_1968	0.78	+0.2
2,039,748	+		Synpcc7942_1968	0.78	+0.0
2,039,750	+		Synpcc7942_1968	0.78	-0.4
2,039,755	+		Synpcc7942_1968	0.79	+0.0
2,039,755	+		Synpcc7942_1968	0.79	+1.1
2,039,755	+		Synpcc7942_1968	0.79	-0.5
2,039,755	+		Synpcc7942_1968	0.79	+2.1
2,039,756	-		Synpcc7942_1968	0.79	+0.8
2,039,756	-		Synpcc7942_1968	0.79	+0.5
2,039,756	-		Synpcc7942_1968	0.79	-0.6
2,039,756	-		Synpcc7942_1968	0.79	+0.7
2,039,764	+		Synpcc7942_1968	0.79	+0.8
2,039,768	-		Synpcc7942_1968	0.80	-1.2
2,039,779	+		Synpcc7942_1968	0.81	-0.3
2,039,797	-		Synpcc7942_1968	0.82	+0.0
2,039,797	-		Synpcc7942_1968	0.82	+1.1
2,039,797	-		Synpcc7942_1968	0.82	+1.5
2,039,818	-		Synpcc7942_1968	0.83	+0.3
2,039,823	-		Synpcc7942_1968	0.84	+0.3
2,039,827	+		Synpcc7942_1968	0.84	+0.2
2,039,830	-		Synpcc7942_1968	0.84	+0.8
2,039,830	-		Synpcc7942_1968	0.84	-0.5
2,039,872	+		Synpcc7942_1968	0.87	+1.5
2,039,872	+		Synpcc7942_1968	0.87	+0.3
2,039,880	-		Synpcc7942_1968	0.88	+1.1
2,039,880	-		Synpcc7942_1968	0.88	+1.1
2,039,880	-		Synpcc7942_1968	0.88	+0.2
2,039,880	-		Synpcc7942_1968	0.88	-0.1
2,039,923	-				+0.0
2,039,986	-				+2.1
2,040,029	+				+0.8
2,040,037	-				+0.2
2,040,037	-				+1.7
2,040,040	+				+0.5
2,040,111	+				-0.4
2,040,111	+				+0.8
2,040,111	+				-1.5
2,040,111	+				+0.6
2,040,111	+				+0.3
2,040,111	+				+0.1
2,040,111	+				+0.5
2,040,119	-				+0.0
2,040,119	-				-1.5
2,040,119	-				-0.6
2,040,119	-				-0.7
2,040,214	-				+0.6
2,040,260	-				-0.6
2,040,315	-				-0.3
2,040,476	-				+0.1
2,040,615	+		Synpcc7942_1969	0.37	-1.5
2,040,633	-		Synpcc7942_1969	0.42	-1.4
2,040,661	+		Synpcc7942_1969	0.49	-0.2
2,040,697	-		Synpcc7942_1969	0.59	-0.6
2,040,745	-		Synpcc7942_1969	0.72	-1.6
2,040,914	-				+0.8
2,040,941	-				-0.3
2,040,943	+				-0.9
2,040,963	-				+0.0
2,040,996	-				-0.0
2,041,043	-				-0.1
2,041,102	+		Synpcc7942_1970	0.14	-1.7
2,041,152	+		Synpcc7942_1970	0.26	+0.0
2,041,162	+		Synpcc7942_1970	0.28	-1.0
2,041,224	-		Synpcc7942_1970	0.42	+1.1
2,041,413	+		Synpcc7942_1970	0.84	-0.1
2,041,414	+		Synpcc7942_1970	0.84	+0.3
2,041,421	-		Synpcc7942_1970	0.86	+0.0
2,041,484	+				+0.1
2,041,507	-				+0.4
2,041,548	-				+0.4
2,041,573	-	ama	Synpcc7942_1971	0.12	-0.4
2,041,575	+	ama	Synpcc7942_1971	0.12	+0.9
2,041,583	-	ama	Synpcc7942_1971	0.13	-1.5
2,041,583	-	ama	Synpcc7942_1971	0.13	+0.8
2,041,621	+	ama	Synpcc7942_1971	0.18	-1.9
2,041,629	-	ama	Synpcc7942_1971	0.19	+0.6
2,041,633	+	ama	Synpcc7942_1971	0.20	-0.4
2,041,757	-	ama	Synpcc7942_1971	0.36	-1.2
2,041,789	-	ama	Synpcc7942_1971	0.41	-0.5
2,041,801	-	ama	Synpcc7942_1971	0.42	-0.4
2,041,815	+	ama	Synpcc7942_1971	0.44	+0.5
2,041,842	-	ama	Synpcc7942_1971	0.48	+0.3