Strain Fitness in Synechococcus elongatus PCC 7942 around Synpcc7942_1960

Experiment: BG11 with Cisplatin 0.05 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	BG11 with Cisplatin 0.05 mg/ml
2,032,100	+				+1.0
2,032,136	+				+0.3
2,032,143	+				-0.4
2,032,144	-				-2.2
2,032,144	-				-0.2
2,032,146	-				-0.5
2,032,166	-				-1.2
2,032,166	-				+0.5
2,032,166	-				+0.0
2,032,207	+				+0.5
2,032,213	-				-1.6
2,032,215	-				+0.2
2,032,215	-				+0.3
2,032,215	-				-0.2
2,032,217	+				-2.3
2,032,217	+				-1.2
2,032,217	+				-1.1
2,032,220	-				-0.1
2,032,222	+				-2.0
2,032,225	-				-1.9
2,032,225	-				-1.1
2,032,290	+		Synpcc7942_1960	0.20	-1.2
2,032,298	-				-1.1
2,032,298	-		Synpcc7942_1960	0.21	-1.7
2,032,336	+		Synpcc7942_1960	0.29	-0.6
2,032,337	-		Synpcc7942_1960	0.29	-1.7
2,032,337	-		Synpcc7942_1960	0.29	-1.3
2,032,359	-		Synpcc7942_1960	0.33	-1.9
2,032,363	+		Synpcc7942_1960	0.34	-0.8
2,032,371	-		Synpcc7942_1960	0.36	-1.2
2,032,371	-		Synpcc7942_1960	0.36	-1.7
2,032,394	-		Synpcc7942_1960	0.40	-2.0
2,032,401	+		Synpcc7942_1960	0.42	-0.4
2,032,406	+		Synpcc7942_1960	0.43	-1.5
2,032,406	+				+0.8
2,032,416	-		Synpcc7942_1960	0.45	-1.5
2,032,426	-		Synpcc7942_1960	0.47	-0.7
2,032,426	-		Synpcc7942_1960	0.47	-1.5
2,032,426	-		Synpcc7942_1960	0.47	+0.6
2,032,442	+		Synpcc7942_1960	0.50	-2.0
2,032,507	-		Synpcc7942_1960	0.63	-0.7
2,032,517	+		Synpcc7942_1960	0.64	-0.0
2,032,557	+		Synpcc7942_1960	0.72	-2.9
2,032,597	+		Synpcc7942_1960	0.80	-2.2
2,032,603	-		Synpcc7942_1960	0.81	-0.1
2,032,619	+		Synpcc7942_1960	0.85	-2.2
2,032,668	+				-1.7
2,032,677	-				-1.2
2,032,683	+				+1.2
2,032,691	-				+0.7
2,032,778	-				-0.5
2,032,874	+				-0.2
2,032,880	+				-0.5
2,032,882	-				-0.2
2,032,882	-				+0.2
2,032,923	+	fbp	Synpcc7942_1961	0.13	-2.2
2,032,978	-	fbp	Synpcc7942_1961	0.23	-0.4
2,032,980	+	fbp	Synpcc7942_1961	0.23	-0.0
2,032,983	-	fbp	Synpcc7942_1961	0.23	-0.6
2,033,011	-	fbp	Synpcc7942_1961	0.29	+0.1
2,033,018	+	fbp	Synpcc7942_1961	0.30	-1.4
2,033,028	+				-1.2
2,033,028	+	fbp	Synpcc7942_1961	0.32	+0.5
2,033,028	+	fbp	Synpcc7942_1961	0.32	-0.6
2,033,028	+	fbp	Synpcc7942_1961	0.32	+1.3
2,033,036	-	fbp	Synpcc7942_1961	0.33	-0.7
2,033,036	-	fbp	Synpcc7942_1961	0.33	-1.4
2,033,036	-	fbp	Synpcc7942_1961	0.33	-2.7
2,033,036	-	fbp	Synpcc7942_1961	0.33	+0.1
2,033,036	-	fbp	Synpcc7942_1961	0.33	-0.8
2,033,038	+	fbp	Synpcc7942_1961	0.34	+0.3
2,033,046	-	fbp	Synpcc7942_1961	0.35	-0.6
2,033,051	-	fbp	Synpcc7942_1961	0.36	-0.3
2,033,054	-	fbp	Synpcc7942_1961	0.36	-1.6
2,033,056	-	fbp	Synpcc7942_1961	0.37	+0.2
2,033,066	+	fbp	Synpcc7942_1961	0.39	-0.2
2,033,073	+	fbp	Synpcc7942_1961	0.40	-3.2
2,033,092	+	fbp	Synpcc7942_1961	0.43	-0.2
2,033,092	+	fbp	Synpcc7942_1961	0.43	-2.0
2,033,092	+	fbp	Synpcc7942_1961	0.43	+0.3
2,033,100	-	fbp	Synpcc7942_1961	0.45	-0.4
2,033,102	-	fbp	Synpcc7942_1961	0.45	-1.8
2,033,102	-	fbp	Synpcc7942_1961	0.45	-1.5
2,033,107	-	fbp	Synpcc7942_1961	0.46	+0.2
2,033,168	-	fbp	Synpcc7942_1961	0.57	-0.6
2,033,173	-	fbp	Synpcc7942_1961	0.58	-0.1
2,033,175	+	fbp	Synpcc7942_1961	0.58	-0.9
2,033,175	+	fbp	Synpcc7942_1961	0.58	-0.8
2,033,183	-	fbp	Synpcc7942_1961	0.60	+2.1
2,033,183	-	fbp	Synpcc7942_1961	0.60	-0.6
2,033,225	+	fbp	Synpcc7942_1961	0.68	+1.3
2,033,248	+	fbp	Synpcc7942_1961	0.72	+0.7
2,033,268	-	fbp	Synpcc7942_1961	0.75	-0.9
2,033,275	-	fbp	Synpcc7942_1961	0.77	-1.4
2,033,321	+	fbp	Synpcc7942_1961	0.85	-0.2
2,033,321	+	fbp	Synpcc7942_1961	0.85	+0.1
2,033,329	-	fbp	Synpcc7942_1961	0.87	+0.2
2,033,329	-				+0.8
2,033,337	+	fbp	Synpcc7942_1961	0.88	-1.4
2,033,358	-				-0.3
2,033,454	-				+1.1
2,033,473	-	psbY	Synpcc7942_1962	0.20	-0.4
2,033,504	-	psbY	Synpcc7942_1962	0.45	-0.2
2,033,508	+	psbY	Synpcc7942_1962	0.48	-0.3
2,033,538	+	psbY	Synpcc7942_1962	0.72	+0.3
2,033,558	-	psbY	Synpcc7942_1962	0.89	-0.8
2,033,565	-				+0.8
2,033,649	-				-1.5
2,033,649	-				+0.1
2,033,659	-				+0.5
2,033,659	-				-0.6
2,033,659	-				+0.7
2,033,678	-				+0.0
2,033,693	-				+1.1