Strain Fitness in Synechococcus elongatus PCC 7942 around Synpcc7942_1891

Experiment: BG11 with Cisplatin 0.05 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	BG11 with Cisplatin 0.05 mg/ml
1,963,419	-		Synpcc7942_1889	0.90	-0.6
1,963,419	-		Synpcc7942_1889	0.90	+0.6
1,963,423	+				-1.0
1,963,448	+				+0.1
1,963,448	+				-0.5
1,963,449	+				+2.3
1,963,456	-				-0.4
1,963,457	-				+0.8
1,963,469	+				+0.6
1,963,469	+				-1.3
1,963,470	-				-2.0
1,963,470	-				-0.2
1,963,477	-				-2.2
1,963,479	-				-0.6
1,963,538	+				-0.9
1,963,538	+				+0.8
1,963,538	+				-0.3
1,963,538	+				-0.6
1,963,538	+				+0.4
1,963,544	-				-0.4
1,963,544	-				-0.2
1,963,546	-				+0.5
1,963,548	-				-2.5
1,963,555	+				-0.3
1,963,555	+				-1.4
1,963,563	-				-0.7
1,963,578	-				-0.6
1,963,628	-				-0.7
1,963,653	-				-0.8
1,963,683	+				-0.7
1,963,686	+				-1.1
1,963,688	+				-0.4
1,963,694	-				-1.2
1,963,696	+				+0.0
1,963,696	+				-1.3
1,963,708	+				-0.2
1,963,708	+				-0.3
1,963,708	+				-0.8
1,963,714	-				-0.3
1,963,716	-				-0.7
1,963,716	-				-0.2
1,963,716	-				-1.1
1,963,716	-				+0.5
1,963,728	+				-0.2
1,963,738	+				-0.7
1,963,738	+				-0.4
1,963,750	-				-0.4
1,963,765	+				-0.2
1,963,765	+				-0.4
1,963,773	-				-2.6
1,963,773	-				+0.2
1,963,788	-				+0.4
1,963,808	-		Synpcc7942_1890	0.12	+0.8
1,963,820	-		Synpcc7942_1890	0.14	-0.1
1,963,836	-		Synpcc7942_1890	0.17	+0.2
1,963,858	-		Synpcc7942_1890	0.22	-0.7
1,963,868	+		Synpcc7942_1890	0.24	-0.7
1,963,876	+		Synpcc7942_1890	0.25	-0.1
1,963,876	-		Synpcc7942_1890	0.25	-0.3
1,963,876	-		Synpcc7942_1890	0.25	+0.4
1,963,877	-		Synpcc7942_1890	0.25	+0.1
1,963,877	-		Synpcc7942_1890	0.25	-1.3
1,963,879	-		Synpcc7942_1890	0.26	-0.0
1,963,882	+		Synpcc7942_1890	0.26	-0.1
1,963,884	-		Synpcc7942_1890	0.27	-2.6
1,963,909	-		Synpcc7942_1890	0.32	+0.5
1,963,936	+		Synpcc7942_1890	0.37	-1.3
1,963,937	+		Synpcc7942_1890	0.37	-1.6
1,963,937	+		Synpcc7942_1890	0.37	-1.6
1,963,945	-		Synpcc7942_1890	0.39	-0.4
1,963,945	-		Synpcc7942_1890	0.39	-0.5
1,963,949	+		Synpcc7942_1890	0.40	-1.0
1,963,949	+		Synpcc7942_1890	0.40	-0.3
1,963,957	-		Synpcc7942_1890	0.41	-1.7
1,963,958	+		Synpcc7942_1890	0.41	-1.5
1,963,979	-		Synpcc7942_1890	0.46	-0.4
1,963,984	-		Synpcc7942_1890	0.47	-0.1
1,963,984	-		Synpcc7942_1890	0.47	-0.4
1,964,008	-		Synpcc7942_1890	0.51	+3.2
1,964,013	-		Synpcc7942_1890	0.52	-0.1
1,964,031	+		Synpcc7942_1890	0.56	-0.1
1,964,043	-		Synpcc7942_1890	0.58	+0.4
1,964,046	+		Synpcc7942_1890	0.59	-2.3
1,964,067	+		Synpcc7942_1890	0.63	-1.2
1,964,071	+		Synpcc7942_1890	0.64	-0.1
1,964,071	+		Synpcc7942_1890	0.64	+0.3
1,964,076	+				-0.5
1,964,076	+		Synpcc7942_1890	0.65	+0.1
1,964,076	+		Synpcc7942_1890	0.65	-0.6
1,964,092	+		Synpcc7942_1890	0.68	-0.6
1,964,100	-		Synpcc7942_1890	0.69	-0.6
1,964,110	+		Synpcc7942_1890	0.71	-2.0
1,964,110	+		Synpcc7942_1890	0.71	-0.2
1,964,118	-		Synpcc7942_1890	0.73	-0.9
1,964,118	-		Synpcc7942_1890	0.73	-0.6
1,964,120	-		Synpcc7942_1890	0.73	+0.4
1,964,184	+		Synpcc7942_1890	0.86	-0.7
1,964,204	-				-0.9
1,964,209	-				+0.4
1,964,210	-				-1.1
1,964,210	-				-1.1
1,964,213	+				-0.4
1,964,215	-				-1.8
1,964,237	-				-0.8
1,964,243	-				-0.3
1,964,301	+				+0.1
1,964,301	+				-0.7
1,964,331	+				+0.0
1,964,366	+				-1.3
1,964,383	-				+1.2
1,964,513	+	labA	Synpcc7942_1891	0.18	-2.5
1,964,546	+	labA	Synpcc7942_1891	0.24	-1.8
1,964,546	+	labA	Synpcc7942_1891	0.24	-2.2
1,964,554	-	labA	Synpcc7942_1891	0.25	-0.9
1,964,554	-	labA	Synpcc7942_1891	0.25	-1.8
1,964,620	-	labA	Synpcc7942_1891	0.37	-1.6
1,964,629	-	labA	Synpcc7942_1891	0.39	-1.7
1,964,674	-	labA	Synpcc7942_1891	0.47	-1.3
1,964,762	+	labA	Synpcc7942_1891	0.62	-1.3
1,964,929	+				-0.8
1,964,937	-				-1.8
1,964,937	-				-2.0
1,964,966	+				+0.1
1,964,974	-				+0.2
1,964,981	-				+0.1
1,964,989	-				-0.0
1,965,008	+				+0.2
1,965,027	+				+0.1
1,965,032	-				-0.4
1,965,056	+		Synpcc7942_1892	0.11	-1.3
1,965,064	-				+0.7
1,965,087	+		Synpcc7942_1892	0.15	+0.3
1,965,095	-		Synpcc7942_1892	0.16	+1.3
1,965,097	-		Synpcc7942_1892	0.16	+0.1
1,965,121	-		Synpcc7942_1892	0.19	+0.2
1,965,128	-		Synpcc7942_1892	0.20	-1.3
1,965,128	-		Synpcc7942_1892	0.20	-1.5
1,965,128	-		Synpcc7942_1892	0.20	-0.0
1,965,229	+		Synpcc7942_1892	0.32	-0.5
1,965,231	-		Synpcc7942_1892	0.32	-1.4
1,965,269	+		Synpcc7942_1892	0.37	+0.7
1,965,282	-		Synpcc7942_1892	0.39	-0.7
1,965,306	+		Synpcc7942_1892	0.42	-1.3
1,965,306	+		Synpcc7942_1892	0.42	-0.4
1,965,316	-		Synpcc7942_1892	0.43	+0.4
1,965,316	-		Synpcc7942_1892	0.43	+0.1
1,965,336	+		Synpcc7942_1892	0.45	-0.6
1,965,337	+		Synpcc7942_1892	0.45	+0.5
1,965,337	+		Synpcc7942_1892	0.45	-0.4
1,965,344	-		Synpcc7942_1892	0.46	-0.1
1,965,344	-		Synpcc7942_1892	0.46	+0.1
1,965,345	-		Synpcc7942_1892	0.46	+0.1
1,965,345	-		Synpcc7942_1892	0.46	-0.1
1,965,345	-		Synpcc7942_1892	0.46	+1.8
1,965,345	-		Synpcc7942_1892	0.46	-0.2
1,965,352	+		Synpcc7942_1892	0.47	-0.3
1,965,355	-		Synpcc7942_1892	0.48	-0.6
1,965,446	+		Synpcc7942_1892	0.59	-0.7
1,965,452	+		Synpcc7942_1892	0.60	+0.3
1,965,460	-		Synpcc7942_1892	0.61	-0.2
1,965,498	-		Synpcc7942_1892	0.65	-0.9
1,965,498	-		Synpcc7942_1892	0.65	-0.4
1,965,513	+		Synpcc7942_1892	0.67	+0.1
1,965,521	+		Synpcc7942_1892	0.68	-0.1
1,965,542	-		Synpcc7942_1892	0.71	+0.1
1,965,542	-		Synpcc7942_1892	0.71	+0.3
1,965,600	-		Synpcc7942_1892	0.78	-1.6
1,965,634	-		Synpcc7942_1892	0.82	-0.2
1,965,691	+		Synpcc7942_1892	0.89	+2.1
1,965,750	-				+0.1
1,965,757	+				-0.1
1,965,790	-				-0.3
1,965,813	-				-1.6
1,965,876	-	natA	Synpcc7942_1893	0.16	-0.1
1,965,882	+	natA	Synpcc7942_1893	0.16	-0.5
1,965,894	-	natA	Synpcc7942_1893	0.18	-0.1
1,965,909	+	natA	Synpcc7942_1893	0.20	+0.7
1,965,909	+	natA	Synpcc7942_1893	0.20	+0.6
1,965,909	+	natA	Synpcc7942_1893	0.20	+0.3
1,965,926	+	natA	Synpcc7942_1893	0.22	+0.3
1,965,963	+	natA	Synpcc7942_1893	0.27	-1.7
1,965,963	+	natA	Synpcc7942_1893	0.27	+0.0
1,965,963	+	natA	Synpcc7942_1893	0.27	+0.5
1,965,963	+	natA	Synpcc7942_1893	0.27	-0.7
1,965,963	+	natA	Synpcc7942_1893	0.27	-0.1
1,965,963	+	natA	Synpcc7942_1893	0.27	-0.6
1,965,963	+	natA	Synpcc7942_1893	0.27	+0.2
1,965,971	-	natA	Synpcc7942_1893	0.28	+0.1
1,965,971	-	natA	Synpcc7942_1893	0.28	-0.1
1,965,971	-	natA	Synpcc7942_1893	0.28	+1.1
1,965,971	-	natA	Synpcc7942_1893	0.28	-0.1
1,965,971	-	natA	Synpcc7942_1893	0.28	+0.0
1,965,971	-	natA	Synpcc7942_1893	0.28	-1.2
1,965,971	-	natA	Synpcc7942_1893	0.28	-0.3
1,965,971	-	natA	Synpcc7942_1893	0.28	-0.1
1,965,971	-	natA	Synpcc7942_1893	0.28	-0.1
1,965,971	-	natA	Synpcc7942_1893	0.28	-0.3