Strain Fitness in Synechococcus elongatus PCC 7942 around Synpcc7942_1863

Experiment: BG11 with Cisplatin 0.05 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	BG11 with Cisplatin 0.05 mg/ml
1,932,707	+				+0.8
1,932,707	+				+1.5
1,932,715	-				-0.5
1,932,719	+				+0.3
1,932,726	+				-0.1
1,932,727	-				-0.5
1,932,817	-				-1.1
1,932,835	-				-1.7
1,932,892	-		Synpcc7942_1862	0.14	-1.2
1,932,902	-		Synpcc7942_1862	0.15	-2.1
1,932,927	-		Synpcc7942_1862	0.18	+0.0
1,933,126	+		Synpcc7942_1862	0.39	-1.3
1,933,141	-		Synpcc7942_1862	0.41	-2.3
1,933,402	-		Synpcc7942_1862	0.69	-0.8
1,933,449	+		Synpcc7942_1862	0.74	-0.8
1,933,487	+		Synpcc7942_1862	0.78	-1.3
1,933,565	+		Synpcc7942_1862	0.87	-1.0
1,933,657	+				-0.2
1,933,660	-				+0.4
1,933,663	+				-0.6
1,933,663	+				+0.0
1,933,663	+				-0.2
1,933,665	-				+0.3
1,933,671	-				-0.7
1,933,738	-				-1.5
1,933,779	+				-0.8
1,933,801	-	hemG	Synpcc7942_1863	0.11	-1.4
1,933,824	+	hemG	Synpcc7942_1863	0.14	-1.8
1,933,837	-	hemG	Synpcc7942_1863	0.15	-1.7
1,933,842	-	hemG	Synpcc7942_1863	0.16	+0.6
1,933,852	+	hemG	Synpcc7942_1863	0.17	+0.0
1,933,857	+	hemG	Synpcc7942_1863	0.18	-1.5
1,933,857	+	hemG	Synpcc7942_1863	0.18	-0.3
1,933,862	+	hemG	Synpcc7942_1863	0.18	-0.5
1,933,870	-	hemG	Synpcc7942_1863	0.19	-0.3
1,933,928	+	hemG	Synpcc7942_1863	0.26	-0.7
1,933,928	+	hemG	Synpcc7942_1863	0.26	-1.3
1,933,928	+	hemG	Synpcc7942_1863	0.26	+0.1
1,933,936	-	hemG	Synpcc7942_1863	0.27	-1.4
1,933,936	-	hemG	Synpcc7942_1863	0.27	-1.6
1,933,936	-	hemG	Synpcc7942_1863	0.27	-2.4
1,933,936	-	hemG	Synpcc7942_1863	0.27	-1.7
1,933,947	-	hemG	Synpcc7942_1863	0.28	+0.6
1,933,991	-	hemG	Synpcc7942_1863	0.33	-0.8
1,934,039	-	hemG	Synpcc7942_1863	0.38	-2.6
1,934,044	-	hemG	Synpcc7942_1863	0.39	-3.0
1,934,076	+	hemG	Synpcc7942_1863	0.43	-1.2
1,934,076	+	hemG	Synpcc7942_1863	0.43	-0.3
1,934,076	+	hemG	Synpcc7942_1863	0.43	-2.0
1,934,084	-	hemG	Synpcc7942_1863	0.43	-1.0
1,934,084	-	hemG	Synpcc7942_1863	0.43	-1.0
1,934,146	+	hemG	Synpcc7942_1863	0.50	-0.1
1,934,178	+	hemG	Synpcc7942_1863	0.54	-0.7
1,934,183	+	hemG	Synpcc7942_1863	0.55	-1.5
1,934,191	-	hemG	Synpcc7942_1863	0.56	-0.4
1,934,225	+	hemG	Synpcc7942_1863	0.59	-1.5
1,934,226	+	hemG	Synpcc7942_1863	0.60	-1.4
1,934,229	-	hemG	Synpcc7942_1863	0.60	-1.9
1,934,234	+	hemG	Synpcc7942_1863	0.60	-0.2
1,934,240	+	hemG	Synpcc7942_1863	0.61	-1.2
1,934,260	+	hemG	Synpcc7942_1863	0.63	-1.0
1,934,330	-	hemG	Synpcc7942_1863	0.71	-2.5
1,934,344	+	hemG	Synpcc7942_1863	0.73	-0.1
1,934,344	+	hemG	Synpcc7942_1863	0.73	-0.5
1,934,344	+	hemG	Synpcc7942_1863	0.73	-1.4
1,934,352	-	hemG	Synpcc7942_1863	0.74	-2.3
1,934,352	-	hemG	Synpcc7942_1863	0.74	-3.4
1,934,362	-	hemG	Synpcc7942_1863	0.75	-1.7
1,934,374	+	hemG	Synpcc7942_1863	0.76	-2.2
1,934,391	+	hemG	Synpcc7942_1863	0.78	+0.3
1,934,440	+	hemG	Synpcc7942_1863	0.84	-2.1
1,934,440	+	hemG	Synpcc7942_1863	0.84	-3.2
1,934,440	+	hemG	Synpcc7942_1863	0.84	-2.7
1,934,465	-	hemG	Synpcc7942_1863	0.87	-0.5
1,934,520	-				-1.6
1,934,529	-				-2.5
1,934,567	+				-0.1
1,934,577	+				-0.8
1,934,577	+				+0.2
1,935,148	+				+0.4
1,935,148	+				+1.2
1,935,164	+				-0.8
1,935,169	+				-0.2
1,935,177	-				-1.4
1,935,190	+				+0.4
1,935,198	-				+0.0
1,935,200	+				+1.5
1,935,203	-				-1.4
1,935,209	-				+0.0
1,935,212	+				-0.7
1,935,212	+				+0.5
1,935,220	-				+0.7
1,935,220	-				+0.3
1,935,293	+				-1.2
1,935,300	-				+2.0
1,935,313	-				+1.2
1,935,320	+				-0.0
1,935,332	+				+0.9
1,935,351	+				-0.5
1,935,359	-				+0.2
1,935,369	+				-0.1
1,935,386	+				-0.3
1,935,394	-				-0.7
1,935,394	-				+0.5
1,935,394	-				-1.1
1,935,394	-				-0.5
1,935,432	+				-1.0
1,935,440	-				-0.1
1,935,444	+				-0.7
1,935,444	+				-0.3
1,935,444	+				-0.3
1,935,446	-				+0.1
1,935,446	-				-0.4
1,935,452	-				+1.2
1,935,452	-				-0.0
1,935,452	-				+0.3
1,935,452	-				+0.3
1,935,480	-				-1.3
1,935,489	+				-0.2
1,935,497	+				+0.6
1,935,578	+	ppnK	Synpcc7942_1865	0.12	-1.0
1,935,578	+	ppnK	Synpcc7942_1865	0.12	-0.2
1,935,578	+	ppnK	Synpcc7942_1865	0.12	+0.5