Strain Fitness in Synechococcus elongatus PCC 7942 around Synpcc7942_1849

Experiment: BG11 with Cisplatin 0.05 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	BG11 with Cisplatin 0.05 mg/ml
1,915,816	+				+0.7
1,915,926	+				-0.3
1,915,939	+				-1.6
1,915,947	+				-1.1
1,915,947	+				-0.6
1,915,947	+				+0.1
1,915,947	+				-0.4
1,915,955	-				-1.9
1,915,955	-				+0.6
1,915,955	-				-1.6
1,915,955	-				-1.0
1,915,972	+				-0.7
1,916,047	-				-1.1
1,916,088	-				-0.8
1,916,109	+				+0.5
1,916,127	+				-0.9
1,916,127	+				-0.3
1,916,167	-				-1.6
1,916,170	-				+0.5
1,916,177	-				-0.2
1,916,191	-				+0.5
1,916,191	-				-1.1
1,916,247	+				-0.9
1,916,255	-				+0.3
1,916,285	-				-0.1
1,916,296	+				+0.1
1,916,309	+				+0.5
1,916,380	+				+1.3
1,916,411	+				+0.2
1,916,411	+				-0.8
1,916,421	+				+0.8
1,916,447	-				-1.9
1,916,459	+				-0.8
1,916,483	-				+0.2
1,916,548	+				+0.5
1,916,577	+				-0.5
1,916,582	+				+0.5
1,916,587	+				-0.9
1,916,660	-				-1.2
1,916,743	+				-0.5
1,916,783	+				-1.1
1,916,805	+	sigC	Synpcc7942_1849	0.15	-1.8
1,916,805	+	sigC	Synpcc7942_1849	0.15	+0.6
1,916,805	+	sigC	Synpcc7942_1849	0.15	-1.8
1,916,806	-				+1.1
1,916,813	-	sigC	Synpcc7942_1849	0.16	-0.8
1,916,813	-	sigC	Synpcc7942_1849	0.16	-2.2
1,916,824	+	sigC	Synpcc7942_1849	0.17	-0.6
1,916,827	-	sigC	Synpcc7942_1849	0.17	-0.4
1,916,832	-	sigC	Synpcc7942_1849	0.18	-0.8
1,916,832	-	sigC	Synpcc7942_1849	0.18	-2.3
1,916,844	-	sigC	Synpcc7942_1849	0.19	-1.9
1,916,849	-				-0.9
1,916,851	+	sigC	Synpcc7942_1849	0.19	-1.2
1,916,867	+	sigC	Synpcc7942_1849	0.21	-0.3
1,916,884	+	sigC	Synpcc7942_1849	0.22	-0.3
1,916,892	+	sigC	Synpcc7942_1849	0.23	-1.5
1,916,910	-	sigC	Synpcc7942_1849	0.24	+0.7
1,916,918	+	sigC	Synpcc7942_1849	0.25	-1.8
1,916,922	+	sigC	Synpcc7942_1849	0.25	-1.2
1,916,949	-	sigC	Synpcc7942_1849	0.27	-0.8
1,916,984	+				-0.3
1,916,995	+	sigC	Synpcc7942_1849	0.31	-1.1
1,917,008	+	sigC	Synpcc7942_1849	0.32	-1.9
1,917,008	+	sigC	Synpcc7942_1849	0.32	-1.2
1,917,022	-	sigC	Synpcc7942_1849	0.34	-1.1
1,917,023	-	sigC	Synpcc7942_1849	0.34	-0.2
1,917,072	+	sigC	Synpcc7942_1849	0.38	-1.3
1,917,083	-	sigC	Synpcc7942_1849	0.39	-1.6
1,917,202	+	sigC	Synpcc7942_1849	0.49	-0.4
1,917,235	+	sigC	Synpcc7942_1849	0.51	-2.6
1,917,242	-	sigC	Synpcc7942_1849	0.52	-2.2
1,917,256	+	sigC	Synpcc7942_1849	0.53	-0.9
1,917,370	-				+0.7
1,917,407	+	sigC	Synpcc7942_1849	0.66	-0.7
1,917,415	-	sigC	Synpcc7942_1849	0.66	-0.9
1,917,429	-	sigC	Synpcc7942_1849	0.68	-2.5
1,917,460	+				+0.5
1,917,523	+				-0.8
1,917,531	-	sigC	Synpcc7942_1849	0.76	-2.2
1,917,531	-	sigC	Synpcc7942_1849	0.76	+0.2
1,917,545	+				+1.1
1,917,553	-	sigC	Synpcc7942_1849	0.78	-2.0
1,917,565	-				-0.3
1,917,617	+	sigC	Synpcc7942_1849	0.83	+0.1
1,917,617	+	sigC	Synpcc7942_1849	0.83	-2.0
1,917,635	-				+0.1
1,917,646	-	sigC	Synpcc7942_1849	0.86	-1.2
1,917,661	-	sigC	Synpcc7942_1849	0.87	-2.3
1,917,661	-				-0.5
1,917,661	-	sigC	Synpcc7942_1849	0.87	-0.6
1,917,675	+	sigC	Synpcc7942_1849	0.88	-0.5
1,917,711	-				-0.4
1,917,741	+				-2.0
1,917,741	+				-2.2
1,917,741	+				+0.5
1,917,741	+				+0.5
1,917,741	+				-0.8
1,917,749	-				-0.3
1,917,749	-				-1.8
1,917,749	-				-1.5
1,917,749	-				-1.5
1,917,749	-				+2.1
1,917,788	+				-1.3
1,917,797	+				+0.4
1,917,826	+				-0.5
1,917,835	-				+1.2
1,917,844	+				-0.2
1,917,844	+				-0.4
1,917,844	+				-0.8
1,917,844	+				-0.9
1,917,844	+				+0.9
1,917,844	+				-0.5
1,917,844	+				-0.5
1,917,844	+				+0.1
1,917,852	-				-0.9
1,917,852	-				+0.3
1,917,852	-				-0.1
1,917,852	-				-0.2
1,917,854	+				+0.1
1,917,854	+				+0.5
1,917,854	+				+0.1
1,917,854	+				-1.1
1,917,854	+				-1.5
1,917,854	+				+1.8
1,917,862	-				-0.0
1,917,862	-				-0.5
1,917,862	-				-0.4
1,917,862	-				-1.0
1,917,862	-				+0.2
1,917,862	-				+0.3
1,917,862	-				-0.3
1,917,862	-				-0.6
1,917,867	+				-0.2
1,917,875	-				-0.1
1,917,875	-				-1.8