Strain Fitness in Synechococcus elongatus PCC 7942 around Synpcc7942_1674

Experiment: BG11 with Cisplatin 0.05 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	BG11 with Cisplatin 0.05 mg/ml
1,742,870	-	vanY	Synpcc7942_1672	0.50	-0.3
1,742,874	+	vanY	Synpcc7942_1672	0.50	+0.5
1,742,876	-	vanY	Synpcc7942_1672	0.51	+0.2
1,742,882	-	vanY	Synpcc7942_1672	0.52	-0.6
1,742,932	+	vanY	Synpcc7942_1672	0.58	+0.1
1,742,936	+	vanY	Synpcc7942_1672	0.59	-0.1
1,742,940	-	vanY	Synpcc7942_1672	0.60	+0.5
1,742,967	-	vanY	Synpcc7942_1672	0.63	+0.1
1,743,018	+	vanY	Synpcc7942_1672	0.70	-0.3
1,743,018	+	vanY	Synpcc7942_1672	0.70	-0.8
1,743,074	-	vanY	Synpcc7942_1672	0.78	-0.9
1,743,074	-	vanY	Synpcc7942_1672	0.78	+0.3
1,743,078	+	vanY	Synpcc7942_1672	0.79	+0.7
1,743,078	+	vanY	Synpcc7942_1672	0.79	-0.1
1,743,084	-	vanY	Synpcc7942_1672	0.79	+0.2
1,743,085	-	vanY	Synpcc7942_1672	0.79	+0.2
1,743,086	-	vanY	Synpcc7942_1672	0.80	-1.6
1,743,121	-	vanY	Synpcc7942_1672	0.84	-1.1
1,743,148	-	vanY	Synpcc7942_1672	0.88	-1.0
1,743,153	-	vanY	Synpcc7942_1672	0.89	-1.2
1,743,187	+				-2.2
1,743,187	+				-1.6
1,743,195	-				-0.9
1,743,195	-				-0.4
1,743,195	-				-0.2
1,743,205	-				-0.4
1,743,205	-				-0.4
1,743,225	-				-0.7
1,743,228	-				-1.7
1,743,896	+		Synpcc7942_1674	0.13	+0.3
1,743,896	+		Synpcc7942_1674	0.13	-0.1
1,743,904	-		Synpcc7942_1674	0.16	-1.1
1,743,923	+		Synpcc7942_1674	0.22	+0.3
1,743,931	-		Synpcc7942_1674	0.24	-1.2
1,743,932	-		Synpcc7942_1674	0.25	-1.7
1,744,060	+		Synpcc7942_1674	0.66	-0.7
1,744,179	-				-1.1
1,744,179	-				-1.0
1,744,236	+				+0.4
1,744,244	-				-0.8
1,744,273	+				+1.1
1,744,273	+				+0.4
1,744,286	+				-0.9
1,744,303	+				+0.1
1,744,304	+				-0.2
1,744,323	+				-0.7
1,744,329	+				-0.2
1,744,375	-		Synpcc7942_1675	0.19	+0.9
1,744,389	-		Synpcc7942_1675	0.22	+0.6
1,744,401	+		Synpcc7942_1675	0.25	+0.1
1,744,419	+		Synpcc7942_1675	0.28	-0.9
1,744,424	+		Synpcc7942_1675	0.29	-1.4
1,744,427	-		Synpcc7942_1675	0.30	+1.5
1,744,433	+		Synpcc7942_1675	0.31	+0.2
1,744,438	+		Synpcc7942_1675	0.32	+0.2
1,744,438	-		Synpcc7942_1675	0.32	-0.9
1,744,446	-		Synpcc7942_1675	0.34	-1.2
1,744,446	-		Synpcc7942_1675	0.34	+0.1
1,744,462	+		Synpcc7942_1675	0.37	-0.4
1,744,462	+		Synpcc7942_1675	0.37	+0.0
1,744,467	+		Synpcc7942_1675	0.38	-0.2
1,744,470	-		Synpcc7942_1675	0.39	+0.4
1,744,472	+		Synpcc7942_1675	0.39	+0.4
1,744,480	-		Synpcc7942_1675	0.41	+0.4
1,744,480	-		Synpcc7942_1675	0.41	-0.1
1,744,483	-		Synpcc7942_1675	0.42	-0.5
1,744,499	-		Synpcc7942_1675	0.45	+0.4
1,744,510	+		Synpcc7942_1675	0.47	-0.2
1,744,543	+		Synpcc7942_1675	0.54	+0.1
1,744,546	-		Synpcc7942_1675	0.55	-1.2
1,744,551	-		Synpcc7942_1675	0.56	+0.0
1,744,562	+		Synpcc7942_1675	0.58	+0.6
1,744,573	-		Synpcc7942_1675	0.60	-1.4
1,744,587	+		Synpcc7942_1675	0.63	-0.6
1,744,588	-		Synpcc7942_1675	0.63	-0.4
1,744,588	-		Synpcc7942_1675	0.63	+0.5
1,744,588	-		Synpcc7942_1675	0.63	+0.6
1,744,613	-		Synpcc7942_1675	0.68	-2.7
1,744,681	+		Synpcc7942_1675	0.82	+0.8
1,744,689	-		Synpcc7942_1675	0.84	-0.2
1,744,722	+				-0.2
1,744,741	+				+0.8
1,744,749	-				-0.1
1,744,766	+				-0.2
1,744,776	-				+0.7
1,744,776	-				-0.0
1,744,776	-				+0.5
1,744,791	-				-0.1
1,744,830	+				-1.0
1,744,830	+				-0.4
1,744,838	-				+0.1
1,744,846	+				+0.3
1,744,854	-				-1.1
1,744,863	-				-0.8
1,744,863	-				-2.6
1,744,891	+		Synpcc7942_1676	0.11	-0.8
1,744,891	+		Synpcc7942_1676	0.11	+0.3
1,744,900	+		Synpcc7942_1676	0.13	-2.5
1,744,908	-		Synpcc7942_1676	0.14	+0.1
1,744,908	-				-0.5
1,744,908	-		Synpcc7942_1676	0.14	-0.2
1,744,908	-		Synpcc7942_1676	0.14	+0.2
1,744,962	-		Synpcc7942_1676	0.22	-0.9
1,744,967	-		Synpcc7942_1676	0.23	-1.2
1,744,971	+		Synpcc7942_1676	0.24	-0.9
1,744,974	-		Synpcc7942_1676	0.24	-0.6
1,744,986	+		Synpcc7942_1676	0.26	+0.4
1,744,994	-		Synpcc7942_1676	0.27	-0.9
1,744,994	-		Synpcc7942_1676	0.27	-0.7
1,745,004	-		Synpcc7942_1676	0.29	+0.3
1,745,012	-		Synpcc7942_1676	0.30	-0.9
1,745,014	-		Synpcc7942_1676	0.30	-1.2
1,745,049	-		Synpcc7942_1676	0.36	+1.3
1,745,086	-		Synpcc7942_1676	0.41	-0.3
1,745,086	-		Synpcc7942_1676	0.41	-0.9
1,745,086	-		Synpcc7942_1676	0.41	-0.2
1,745,086	-		Synpcc7942_1676	0.41	-1.0
1,745,115	+		Synpcc7942_1676	0.46	-0.7
1,745,126	+				+1.1
1,745,134	-				-0.9
1,745,134	-		Synpcc7942_1676	0.49	-1.0
1,745,134	-		Synpcc7942_1676	0.49	-0.7
1,745,139	+		Synpcc7942_1676	0.49	+0.0
1,745,165	+		Synpcc7942_1676	0.53	-0.7