Strain Fitness in Synechococcus elongatus PCC 7942 around Synpcc7942_1648

Experiment: BG11 with Cisplatin 0.05 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	BG11 with Cisplatin 0.05 mg/ml
1,715,230	+				+0.3
1,715,238	-				+0.2
1,715,282	-				-0.7
1,715,296	-				-0.2
1,715,299	-				-1.1
1,715,320	-				+0.3
1,715,360	-		Synpcc7942_1647	0.10	-0.8
1,715,368	-		Synpcc7942_1647	0.11	+0.9
1,715,368	-		Synpcc7942_1647	0.11	+0.1
1,715,374	+		Synpcc7942_1647	0.12	-0.0
1,715,382	-		Synpcc7942_1647	0.13	-0.7
1,715,382	-		Synpcc7942_1647	0.13	-1.5
1,715,382	-		Synpcc7942_1647	0.13	-0.1
1,715,382	-		Synpcc7942_1647	0.13	-0.3
1,715,382	-		Synpcc7942_1647	0.13	+0.6
1,715,382	-		Synpcc7942_1647	0.13	-0.4
1,715,398	+		Synpcc7942_1647	0.14	-0.6
1,715,403	+		Synpcc7942_1647	0.15	+0.2
1,715,404	-		Synpcc7942_1647	0.15	+0.4
1,715,404	-		Synpcc7942_1647	0.15	-1.8
1,715,457	+		Synpcc7942_1647	0.21	+0.5
1,715,457	+		Synpcc7942_1647	0.21	+0.7
1,715,457	+		Synpcc7942_1647	0.21	+0.1
1,715,465	+		Synpcc7942_1647	0.22	-0.4
1,715,473	-		Synpcc7942_1647	0.22	+0.4
1,715,473	-		Synpcc7942_1647	0.22	-0.7
1,715,499	+		Synpcc7942_1647	0.25	+0.4
1,715,519	-		Synpcc7942_1647	0.27	-1.4
1,715,522	+		Synpcc7942_1647	0.28	-0.3
1,715,530	-		Synpcc7942_1647	0.29	+0.8
1,715,562	+		Synpcc7942_1647	0.32	-0.1
1,715,568	-		Synpcc7942_1647	0.33	-0.8
1,715,594	+		Synpcc7942_1647	0.36	+0.1
1,715,600	+		Synpcc7942_1647	0.36	-0.3
1,715,601	-		Synpcc7942_1647	0.36	-0.6
1,715,605	+		Synpcc7942_1647	0.37	+0.2
1,715,628	-		Synpcc7942_1647	0.39	-1.2
1,715,630	+		Synpcc7942_1647	0.40	+0.0
1,715,630	+		Synpcc7942_1647	0.40	-0.3
1,715,630	+		Synpcc7942_1647	0.40	-0.9
1,715,630	+		Synpcc7942_1647	0.40	-0.9
1,715,630	+		Synpcc7942_1647	0.40	+0.2
1,715,638	-		Synpcc7942_1647	0.40	-1.2
1,715,655	-		Synpcc7942_1647	0.42	-0.1
1,715,694	-		Synpcc7942_1647	0.46	+0.4
1,715,706	+		Synpcc7942_1647	0.48	-0.9
1,715,714	-		Synpcc7942_1647	0.49	+0.0
1,715,741	-		Synpcc7942_1647	0.52	-1.1
1,715,760	-		Synpcc7942_1647	0.54	-0.5
1,715,761	-		Synpcc7942_1647	0.54	-1.6
1,715,761	-		Synpcc7942_1647	0.54	-0.0
1,715,761	-		Synpcc7942_1647	0.54	-0.4
1,715,777	-		Synpcc7942_1647	0.55	+1.5
1,715,781	+		Synpcc7942_1647	0.56	+0.1
1,715,788	+		Synpcc7942_1647	0.57	+0.1
1,715,790	+		Synpcc7942_1647	0.57	+0.3
1,715,798	+		Synpcc7942_1647	0.58	+0.3
1,715,798	+		Synpcc7942_1647	0.58	+0.5
1,715,912	-		Synpcc7942_1647	0.70	-0.9
1,715,958	-				+0.5
1,715,963	+		Synpcc7942_1647	0.76	-0.7
1,715,963	+		Synpcc7942_1647	0.76	-1.7
1,715,963	+		Synpcc7942_1647	0.76	+0.1
1,715,963	+		Synpcc7942_1647	0.76	-0.8
1,715,963	-		Synpcc7942_1647	0.76	-0.4
1,715,971	-		Synpcc7942_1647	0.77	-0.2
1,715,987	-		Synpcc7942_1647	0.78	+1.3
1,715,994	-		Synpcc7942_1647	0.79	-0.4
1,716,020	-		Synpcc7942_1647	0.82	-0.6
1,716,024	+		Synpcc7942_1647	0.82	-0.2
1,716,058	-		Synpcc7942_1647	0.86	-1.2
1,716,065	+		Synpcc7942_1647	0.87	-1.0
1,716,137	-				-0.5
1,716,137	-				+0.1
1,716,138	-				+0.0
1,716,142	-				+1.0
1,716,142	-				-0.3
1,716,212	+				+0.1
1,716,212	+				-0.5
1,716,212	+				-0.7
1,716,220	-				+0.0
1,716,281	+		Synpcc7942_1648	0.20	-1.8
1,716,291	-		Synpcc7942_1648	0.23	-1.4
1,716,315	+		Synpcc7942_1648	0.28	-0.5
1,716,450	+		Synpcc7942_1648	0.58	-0.0
1,716,542	+		Synpcc7942_1648	0.78	-2.0
1,716,550	-		Synpcc7942_1648	0.80	-2.0
1,716,571	-		Synpcc7942_1648	0.85	-1.1
1,716,593	-		Synpcc7942_1648	0.90	-2.8
1,716,635	+				-0.2
1,716,635	+				-1.5
1,716,638	-				-1.6
1,716,656	+				-1.1
1,716,796	+				+0.1
1,716,796	+				+0.5
1,716,800	+				-0.7
1,716,803	-				+0.3
1,716,804	-				-0.2
1,716,804	-				+0.8
1,716,804	-				+0.2
1,716,809	+				-0.6
1,716,817	-				+0.1
1,716,817	-				+0.2
1,716,820	+				-0.5
1,716,822	-				-0.6
1,716,825	+				+0.1
1,716,840	-				+0.2
1,716,852	-				+0.6
1,716,863	+		Synpcc7942_1649	0.10	+0.4
1,716,881	-		Synpcc7942_1649	0.13	+0.2
1,716,910	+		Synpcc7942_1649	0.17	-0.1
1,716,978	+		Synpcc7942_1649	0.26	-0.8
1,716,978	+		Synpcc7942_1649	0.26	-0.0
1,716,978	+		Synpcc7942_1649	0.26	-0.1
1,716,978	+		Synpcc7942_1649	0.26	-0.6
1,716,978	+		Synpcc7942_1649	0.26	-0.0
1,716,978	+		Synpcc7942_1649	0.26	-0.2
1,716,978	+		Synpcc7942_1649	0.26	-1.5
1,716,978	+		Synpcc7942_1649	0.26	+0.8
1,716,981	-		Synpcc7942_1649	0.27	-0.0
1,716,986	-		Synpcc7942_1649	0.28	+1.1
1,716,986	-		Synpcc7942_1649	0.28	-1.4
1,716,996	-		Synpcc7942_1649	0.29	-0.4
1,717,014	+		Synpcc7942_1649	0.32	+0.3
1,717,014	+		Synpcc7942_1649	0.32	+0.1
1,717,035	+		Synpcc7942_1649	0.34	-1.2
1,717,081	+		Synpcc7942_1649	0.41	-1.2
1,717,089	-		Synpcc7942_1649	0.42	-0.2
1,717,110	+		Synpcc7942_1649	0.45	-1.2
1,717,149	+		Synpcc7942_1649	0.50	-1.6
1,717,156	-		Synpcc7942_1649	0.51	-0.3
1,717,200	-		Synpcc7942_1649	0.57	+0.3
1,717,220	+		Synpcc7942_1649	0.60	+1.1
1,717,225	+		Synpcc7942_1649	0.61	-3.1
1,717,230	-		Synpcc7942_1649	0.62	+0.5
1,717,240	+		Synpcc7942_1649	0.63	-0.6
1,717,245	+		Synpcc7942_1649	0.64	-0.9
1,717,248	-		Synpcc7942_1649	0.64	+0.1
1,717,248	-		Synpcc7942_1649	0.64	+0.2
1,717,248	-		Synpcc7942_1649	0.64	+0.4
1,717,250	+		Synpcc7942_1649	0.64	+0.4
1,717,260	+		Synpcc7942_1649	0.66	+0.5
1,717,265	+		Synpcc7942_1649	0.67	+0.5
1,717,268	-		Synpcc7942_1649	0.67	+0.4
1,717,268	-		Synpcc7942_1649	0.67	+0.4
1,717,268	-		Synpcc7942_1649	0.67	+0.8
1,717,274	+		Synpcc7942_1649	0.68	+0.5
1,717,282	-		Synpcc7942_1649	0.69	+0.1
1,717,282	-		Synpcc7942_1649	0.69	-0.0
1,717,312	+		Synpcc7942_1649	0.73	-0.0
1,717,442	-				-0.5
1,717,484	-				+0.3
1,717,530	-				-0.3
1,717,545	-				+0.4
1,717,557	-				+0.1
1,717,593	+				+0.4
1,717,627	+				+1.7
1,717,627	+				+1.2
1,717,627	+				+0.3
1,717,635	-				+0.2