Strain Fitness in Synechococcus elongatus PCC 7942 around Synpcc7942_1546

Experiment: BG11 with Cisplatin 0.05 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	BG11 with Cisplatin 0.05 mg/ml
1,600,519	-				-0.5
1,600,527	-				+0.7
1,600,571	+				-0.4
1,600,591	+				+0.4
1,600,591	+				-1.0
1,600,609	+				+0.3
1,600,613	-				-0.2
1,600,617	+				-1.5
1,600,627	+				-1.7
1,600,669	-		Synpcc7942_1543	0.13	-0.4
1,600,678	+		Synpcc7942_1543	0.21	-0.6
1,600,686	+		Synpcc7942_1543	0.27	-0.4
1,600,713	-		Synpcc7942_1543	0.48	+1.4
1,600,713	-		Synpcc7942_1543	0.48	-0.3
1,600,713	-		Synpcc7942_1543	0.48	+0.4
1,600,841	-		Synpcc7942_1544	0.15	-0.1
1,600,847	+		Synpcc7942_1544	0.18	-0.7
1,600,881	+		Synpcc7942_1544	0.31	-2.2
1,600,889	-		Synpcc7942_1544	0.35	-1.2
1,600,889	-		Synpcc7942_1544	0.35	+0.7
1,600,923	+		Synpcc7942_1544	0.48	-1.3
1,601,010	+		Synpcc7942_1544	0.83	-2.2
1,601,010	+		Synpcc7942_1544	0.83	-0.1
1,601,018	-				-0.9
1,601,099	-				-0.1
1,601,109	-		Synpcc7942_1545	0.12	-0.3
1,601,116	+		Synpcc7942_1545	0.13	+1.5
1,601,116	+		Synpcc7942_1545	0.13	-0.6
1,601,116	+		Synpcc7942_1545	0.13	+0.8
1,601,116	+		Synpcc7942_1545	0.13	+0.5
1,601,124	-		Synpcc7942_1545	0.15	-0.5
1,601,124	-		Synpcc7942_1545	0.15	+1.0
1,601,160	-		Synpcc7942_1545	0.23	-0.2
1,601,162	+		Synpcc7942_1545	0.23	-0.3
1,601,171	+		Synpcc7942_1545	0.25	-1.4
1,601,192	+		Synpcc7942_1545	0.30	+0.3
1,601,205	+		Synpcc7942_1545	0.33	+0.2
1,601,217	+		Synpcc7942_1545	0.35	+1.1
1,601,250	-		Synpcc7942_1545	0.43	+0.6
1,601,310	-		Synpcc7942_1545	0.56	+1.1
1,601,315	-		Synpcc7942_1545	0.57	+0.8
1,601,387	+		Synpcc7942_1545	0.73	+0.7
1,601,400	-		Synpcc7942_1545	0.75	+0.1
1,601,402	+		Synpcc7942_1545	0.76	+0.0
1,601,402	+		Synpcc7942_1545	0.76	-0.3
1,601,410	-		Synpcc7942_1545	0.78	+0.9
1,601,410	-		Synpcc7942_1545	0.78	-0.1
1,601,410	-		Synpcc7942_1545	0.78	+0.6
1,601,430	-		Synpcc7942_1545	0.82	-0.8
1,601,438	-		Synpcc7942_1545	0.84	-0.3
1,601,464	+		Synpcc7942_1545	0.89	-0.2
1,601,496	-				+0.7
1,601,497	-				+0.2
1,601,498	+				-2.0
1,601,506	-				-0.3
1,601,523	+				-1.9
1,601,541	-				-2.8
1,601,542	+				-1.7
1,601,550	-				-0.7
1,601,607	-				-1.9
1,601,706	+		Synpcc7942_1546	0.16	-3.5
1,601,709	-		Synpcc7942_1546	0.16	-1.9
1,601,714	-		Synpcc7942_1546	0.16	-2.1
1,601,714	-		Synpcc7942_1546	0.16	-1.5
1,601,759	-		Synpcc7942_1546	0.19	-1.5
1,601,798	-		Synpcc7942_1546	0.22	-1.0
1,601,809	+		Synpcc7942_1546	0.23	-1.5
1,601,847	+		Synpcc7942_1546	0.26	-1.8
1,601,865	-		Synpcc7942_1546	0.27	-1.9
1,601,911	-		Synpcc7942_1546	0.30	-2.1
1,601,913	+		Synpcc7942_1546	0.30	-4.0
1,601,933	-		Synpcc7942_1546	0.32	-1.6
1,601,957	+				+1.1
1,601,983	+				-0.7
1,601,991	-		Synpcc7942_1546	0.36	-0.5
1,602,099	-		Synpcc7942_1546	0.44	-1.1
1,602,103	+		Synpcc7942_1546	0.44	-2.0
1,602,103	+		Synpcc7942_1546	0.44	-1.5
1,602,217	+		Synpcc7942_1546	0.52	-1.7
1,602,238	+		Synpcc7942_1546	0.54	-1.8
1,602,253	-		Synpcc7942_1546	0.55	+0.1
1,602,272	-		Synpcc7942_1546	0.56	-2.7
1,602,294	+		Synpcc7942_1546	0.58	-2.0
1,602,294	+		Synpcc7942_1546	0.58	-1.6
1,602,352	-		Synpcc7942_1546	0.62	-1.2
1,602,369	+		Synpcc7942_1546	0.63	-4.5
1,602,379	+		Synpcc7942_1546	0.64	-1.2
1,602,394	+		Synpcc7942_1546	0.65	-2.2
1,602,499	+		Synpcc7942_1546	0.72	+2.9
1,602,567	-		Synpcc7942_1546	0.77	-3.0
1,602,588	+		Synpcc7942_1546	0.79	-2.5
1,602,664	+		Synpcc7942_1546	0.84	-0.9
1,602,700	-		Synpcc7942_1546	0.87	-2.8
1,602,710	+		Synpcc7942_1546	0.87	+0.3
1,602,724	+		Synpcc7942_1546	0.88	-0.3
1,602,729	+		Synpcc7942_1546	0.89	-1.2
1,602,774	-				-2.5
1,602,801	+				-0.1
1,602,834	+				-2.4
1,602,875	-				+0.9
1,602,924	-				-0.1
1,603,094	+		Synpcc7942_1547	0.15	-0.4
1,603,200	+		Synpcc7942_1547	0.43	+0.6
1,603,238	+		Synpcc7942_1547	0.53	+1.1
1,603,300	-		Synpcc7942_1547	0.70	-1.0
1,603,492	-				-0.1
1,603,561	+				-1.1
1,603,561	+				-0.7
1,603,561	+				-0.1
1,603,597	-				-0.4
1,603,629	+				+0.4
1,603,637	-				-2.4
1,603,666	+				-1.2
1,603,666	+				-0.1
1,603,713	-				-0.0
1,603,806	-				-0.4
1,603,819	-				+0.5
1,603,834	-				-0.2
1,603,847	+				+0.8
1,603,855	-				-0.0
1,603,857	+				-0.9
1,603,857	+				-0.1
1,603,866	-				+0.4