Strain Fitness in Synechococcus elongatus PCC 7942 around Synpcc7942_1531

Experiment: BG11 with Cisplatin 0.05 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	BG11 with Cisplatin 0.05 mg/ml
1,590,311	-				-0.9
1,590,322	-				-0.8
1,590,326	+		Synpcc7942_1530	0.10	+0.0
1,590,333	-		Synpcc7942_1530	0.12	+0.0
1,590,334	-		Synpcc7942_1530	0.12	-0.2
1,590,410	+		Synpcc7942_1530	0.30	-0.4
1,590,441	-		Synpcc7942_1530	0.37	+1.5
1,590,495	-		Synpcc7942_1530	0.50	+0.2
1,590,505	-		Synpcc7942_1530	0.52	-0.5
1,590,508	+		Synpcc7942_1530	0.53	-0.5
1,590,572	-		Synpcc7942_1530	0.68	-0.5
1,590,573	-		Synpcc7942_1530	0.68	+0.6
1,590,672	+				+0.6
1,590,741	-				+0.7
1,590,752	-				+1.4
1,591,027	-	modA	Synpcc7942_1531	0.28	-1.1
1,591,162	+	modA	Synpcc7942_1531	0.44	-2.9
1,591,284	+	modA	Synpcc7942_1531	0.59	-1.8
1,591,373	-	modA	Synpcc7942_1531	0.70	-1.5
1,591,462	+	modA	Synpcc7942_1531	0.81	-0.1
1,591,559	-				-2.7
1,591,628	-				+1.0
1,591,628	-				+0.1
1,592,051	+		Synpcc7942_1532	0.66	-0.7
1,592,230	-				-0.9
1,592,249	+				-0.2
1,592,249	+				+0.5
1,592,271	+				+0.5
1,592,314	-				-0.9
1,592,327	+				+0.0
1,592,327	+				+1.0
1,592,335	-				+0.5
1,592,342	-	sdhB	Synpcc7942_1533	0.10	-1.3
1,592,390	+	sdhB	Synpcc7942_1533	0.16	+0.4
1,592,396	-	sdhB	Synpcc7942_1533	0.17	-0.1
1,592,398	-	sdhB	Synpcc7942_1533	0.17	+0.1
1,592,400	+	sdhB	Synpcc7942_1533	0.17	+0.4
1,592,400	+	sdhB	Synpcc7942_1533	0.17	-0.4
1,592,408	+	sdhB	Synpcc7942_1533	0.18	-1.1
1,592,408	-	sdhB	Synpcc7942_1533	0.18	-0.0
1,592,419	+	sdhB	Synpcc7942_1533	0.20	+0.1
1,592,445	+	sdhB	Synpcc7942_1533	0.23	+1.6
1,592,451	-	sdhB	Synpcc7942_1533	0.23	+0.1
1,592,460	-	sdhB	Synpcc7942_1533	0.25	+0.6
1,592,485	-	sdhB	Synpcc7942_1533	0.28	+0.3
1,592,489	+	sdhB	Synpcc7942_1533	0.28	+0.4
1,592,497	-	sdhB	Synpcc7942_1533	0.29	+0.5
1,592,551	-	sdhB	Synpcc7942_1533	0.35	-2.1
1,592,560	+	sdhB	Synpcc7942_1533	0.36	-0.6
1,592,596	+	sdhB	Synpcc7942_1533	0.41	+0.7
1,592,602	+	sdhB	Synpcc7942_1533	0.41	+0.4