Strain Fitness in Synechococcus elongatus PCC 7942 around Synpcc7942_1478

Experiment: BG11 with Cisplatin 0.05 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	BG11 with Cisplatin 0.05 mg/ml
1,529,424	-		Synpcc7942_1477	0.58	+0.8
1,529,428	+		Synpcc7942_1477	0.59	-0.0
1,529,429	-		Synpcc7942_1477	0.59	+0.7
1,529,438	+		Synpcc7942_1477	0.59	+0.1
1,529,463	-		Synpcc7942_1477	0.60	-1.9
1,529,488	+		Synpcc7942_1477	0.61	+0.6
1,529,515	-		Synpcc7942_1477	0.63	-0.5
1,529,523	+		Synpcc7942_1477	0.63	+0.9
1,529,637	-		Synpcc7942_1477	0.68	-0.5
1,529,645	+		Synpcc7942_1477	0.68	+0.3
1,529,667	+		Synpcc7942_1477	0.69	-0.3
1,529,714	+		Synpcc7942_1477	0.72	-0.4
1,529,719	+		Synpcc7942_1477	0.72	-0.3
1,529,719	+		Synpcc7942_1477	0.72	+0.1
1,529,750	+		Synpcc7942_1477	0.73	+1.0
1,529,757	+		Synpcc7942_1477	0.74	-0.5
1,529,809	+		Synpcc7942_1477	0.76	-0.2
1,529,831	+		Synpcc7942_1477	0.77	+0.3
1,529,836	+		Synpcc7942_1477	0.77	-1.5
1,529,900	-		Synpcc7942_1477	0.80	+0.2
1,529,961	+				+0.1
1,529,984	+		Synpcc7942_1477	0.84	+0.7
1,529,984	-		Synpcc7942_1477	0.84	-0.1
1,530,001	-		Synpcc7942_1477	0.85	-0.7
1,530,061	+		Synpcc7942_1477	0.87	-0.4
1,530,073	-		Synpcc7942_1477	0.88	-0.4
1,530,083	-		Synpcc7942_1477	0.88	-0.2
1,530,131	+				+0.1
1,530,148	+				+1.0
1,530,148	+				+0.3
1,530,148	+				+0.2
1,530,148	+				-1.1
1,530,156	-				-0.5
1,530,156	-				-0.3
1,530,156	-				-0.0
1,530,156	-				+1.0
1,530,182	-				-0.3
1,530,195	-				-0.2
1,530,230	+				+2.0
1,530,230	+				+0.2
1,530,253	+				+0.0
1,530,253	+				+0.5
1,530,253	+				-0.3
1,530,253	+				-0.1
1,530,253	+				+0.3
1,530,253	+				-0.1
1,530,253	+				-0.5
1,530,253	+				-0.4
1,530,256	+				+0.2
1,530,261	-				-0.0
1,530,261	-				-0.6
1,530,261	-				+0.3
1,530,261	-				+0.5
1,530,261	-				-1.2
1,530,261	-				-1.1
1,530,261	-				+0.3
1,530,261	-				-0.0
1,530,261	-				+0.2
1,530,261	-				-0.3
1,530,279	+				+0.2
1,530,287	-				+1.1
1,530,288	-				-0.6
1,530,320	-				-0.3
1,530,320	-				-0.6
1,530,351	+				-0.1
1,530,359	-				+0.2
1,530,364	-				-1.1
1,530,412	+				-0.5
1,530,422	+				+0.3
1,530,550	-	cytM	Synpcc7942_1478	0.31	-0.2
1,530,552	+	cytM	Synpcc7942_1478	0.31	-0.5
1,530,560	-	cytM	Synpcc7942_1478	0.33	-0.3
1,530,632	+	cytM	Synpcc7942_1478	0.50	-0.7
1,530,645	+	cytM	Synpcc7942_1478	0.53	-1.9
1,530,654	-	cytM	Synpcc7942_1478	0.55	-0.6
1,530,654	-	cytM	Synpcc7942_1478	0.55	-2.4
1,530,654	-	cytM	Synpcc7942_1478	0.55	-1.7
1,530,654	-	cytM	Synpcc7942_1478	0.55	-1.3
1,530,654	-	cytM	Synpcc7942_1478	0.55	-1.4
1,530,656	+	cytM	Synpcc7942_1478	0.55	-1.8
1,530,664	-	cytM	Synpcc7942_1478	0.57	-0.7
1,530,669	-	cytM	Synpcc7942_1478	0.58	-1.4
1,530,742	+	cytM	Synpcc7942_1478	0.75	-0.2
1,530,742	+	cytM	Synpcc7942_1478	0.75	-2.4
1,530,744	-	cytM	Synpcc7942_1478	0.75	-2.6
1,530,783	+	cytM	Synpcc7942_1478	0.84	+0.3
1,530,847	+				+0.4
1,530,849	+				+0.5
1,530,889	+				+0.1
1,530,889	+				+0.4
1,530,889	+				+0.5
1,530,889	+				-0.7
1,530,895	+				+0.7
1,530,895	+				+0.3
1,530,895	+				-0.1
1,531,191	+				-0.2
1,531,213	+				+0.2
1,531,213	+				+0.2
1,531,213	+				-1.1
1,531,221	-				-0.8
1,531,313	-		Synpcc7942_1480	0.21	-1.1
1,531,313	-		Synpcc7942_1480	0.21	+0.1
1,531,330	-		Synpcc7942_1480	0.25	-2.1
1,531,397	+		Synpcc7942_1480	0.37	-0.9
1,531,436	-		Synpcc7942_1480	0.44	+1.1
1,531,437	+		Synpcc7942_1480	0.44	+0.5
1,531,447	+		Synpcc7942_1480	0.46	-1.7
1,531,467	-		Synpcc7942_1480	0.49	+0.3
1,531,527	+		Synpcc7942_1480	0.60	+0.3
1,531,527	+		Synpcc7942_1480	0.60	-1.2
1,531,527	+		Synpcc7942_1480	0.60	-1.6
1,531,527	+		Synpcc7942_1480	0.60	-0.2
1,531,535	-		Synpcc7942_1480	0.61	-0.0
1,531,541	+		Synpcc7942_1480	0.63	-0.9
1,531,547	-		Synpcc7942_1480	0.64	-0.8
1,531,548	+		Synpcc7942_1480	0.64	-2.1
1,531,548	+		Synpcc7942_1480	0.64	-0.5
1,531,556	-		Synpcc7942_1480	0.65	+0.1
1,531,659	-		Synpcc7942_1480	0.84	-1.9
1,531,659	-		Synpcc7942_1480	0.84	+0.4
1,531,695	+				-1.2
1,531,755	+				-0.6
1,531,763	-				+0.0