Strain Fitness in Synechococcus elongatus PCC 7942 around Synpcc7942_1460

Experiment: BG11 with Cisplatin 0.05 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	BG11 with Cisplatin 0.05 mg/ml
1,511,330	+		Synpcc7942_1458	0.65	-1.8
1,511,360	-		Synpcc7942_1458	0.70	-0.4
1,511,377	+		Synpcc7942_1458	0.73	+0.0
1,511,378	-		Synpcc7942_1458	0.73	-1.9
1,511,385	-		Synpcc7942_1458	0.75	+0.2
1,511,385	-		Synpcc7942_1458	0.75	-1.5
1,511,436	+		Synpcc7942_1458	0.84	+0.2
1,511,436	+		Synpcc7942_1458	0.84	+0.1
1,511,451	-		Synpcc7942_1458	0.86	-0.8
1,511,467	+		Synpcc7942_1458	0.89	-0.2
1,511,486	+				-0.4
1,511,486	+				-3.0
1,511,486	+				+0.0
1,511,486	+				-2.4
1,511,486	+				-0.5
1,511,486	+				+0.4
1,511,486	+				-0.7
1,511,486	+				-1.0
1,511,486	+				-0.2
1,511,486	+				-1.2
1,511,494	-				+2.1
1,511,494	-				-0.0
1,511,494	-				-0.8
1,511,494	-				-0.6
1,511,521	-				+0.4
1,511,521	-				-2.7
1,511,523	+				+0.1
1,511,531	-				+0.3
1,511,554	+				+0.2
1,511,555	+				-0.2
1,511,562	+				-0.5
1,511,570	+				-0.4
1,511,570	+				+0.7
1,511,570	-				+0.5
1,511,570	-				-0.0
1,511,570	-				-0.7
1,511,570	-				-0.3
1,511,578	-				+0.9
1,511,578	-				-2.1
1,511,578	-				+0.5
1,511,578	-				-0.2
1,511,580	-				+0.2
1,511,580	-				-0.7
1,511,580	-				+1.3
1,511,580	-				-0.1
1,511,588	-				+0.3
1,511,598	-				-0.5
1,511,626	+				-0.2
1,511,631	+				+0.1
1,511,646	-				+0.1
1,511,646	-				-0.6
1,512,212	-				+0.2
1,512,222	-				-0.3
1,512,248	-				-1.2
1,512,252	+				-0.2
1,512,252	+				-1.1
1,512,282	-				+2.3
1,512,294	+				+0.7
1,512,296	+				+0.5
1,512,325	-				+0.0
1,512,406	-		Synpcc7942_1460	0.33	-0.7
1,512,409	+		Synpcc7942_1460	0.34	-2.7
1,512,417	-		Synpcc7942_1460	0.37	+0.1
1,512,517	+		Synpcc7942_1460	0.76	-1.4
1,512,518	-		Synpcc7942_1460	0.76	+0.7
1,512,524	-		Synpcc7942_1460	0.79	-1.9
1,512,532	-		Synpcc7942_1460	0.82	-2.5
1,512,535	+		Synpcc7942_1460	0.83	-4.3
1,512,574	-				-3.2
1,512,580	+				-1.1
1,512,615	-				-0.3
1,512,620	+				-0.5
1,512,622	+				+0.4
1,512,635	-				-0.1
1,512,640	-				-0.2
1,512,680	-				-0.5
1,512,680	-				+0.1
1,512,701	-				-1.0
1,512,707	+				+0.9
1,512,707	+				-1.2
1,512,715	-				+0.8
1,512,715	-				-0.3
1,512,751	+				+1.6
1,512,751	+				-0.2
1,512,759	-				+1.1
1,512,761	+				+0.2
1,512,769	-				+0.3
1,512,828	+				-0.2
1,512,844	+	irpB	Synpcc7942_1461	0.11	-0.5
1,512,862	-	irpB	Synpcc7942_1461	0.12	-0.1
1,512,862	-	irpB	Synpcc7942_1461	0.12	+0.3
1,512,874	+	irpB	Synpcc7942_1461	0.13	+0.2
1,512,895	-	irpB	Synpcc7942_1461	0.15	+0.5
1,512,957	+	irpB	Synpcc7942_1461	0.20	-0.4
1,512,957	+	irpB	Synpcc7942_1461	0.20	-0.3
1,512,957	+				+1.1
1,512,957	+	irpB	Synpcc7942_1461	0.20	-1.4
1,512,965	-	irpB	Synpcc7942_1461	0.20	+1.0
1,512,965	-	irpB	Synpcc7942_1461	0.20	-0.8
1,512,990	+	irpB	Synpcc7942_1461	0.22	-0.1
1,512,997	+	irpB	Synpcc7942_1461	0.23	-0.9
1,513,002	+	irpB	Synpcc7942_1461	0.23	+2.3
1,513,002	+	irpB	Synpcc7942_1461	0.23	-0.2
1,513,002	+	irpB	Synpcc7942_1461	0.23	-0.3
1,513,002	+	irpB	Synpcc7942_1461	0.23	-0.4
1,513,002	+	irpB	Synpcc7942_1461	0.23	+0.4
1,513,010	-	irpB	Synpcc7942_1461	0.24	-0.5
1,513,073	+	irpB	Synpcc7942_1461	0.29	+0.4
1,513,078	+	irpB	Synpcc7942_1461	0.29	-1.2
1,513,078	+	irpB	Synpcc7942_1461	0.29	+0.5
1,513,081	-	irpB	Synpcc7942_1461	0.30	+0.1
1,513,081	-	irpB	Synpcc7942_1461	0.30	+0.4
1,513,084	+	irpB	Synpcc7942_1461	0.30	-0.5
1,513,092	-	irpB	Synpcc7942_1461	0.30	+0.3
1,513,098	-	irpB	Synpcc7942_1461	0.31	+0.6
1,513,148	-	irpB	Synpcc7942_1461	0.35	-0.4
1,513,149	-	irpB	Synpcc7942_1461	0.35	+2.4
1,513,149	-	irpB	Synpcc7942_1461	0.35	+0.4
1,513,181	+	irpB	Synpcc7942_1461	0.38	+0.9
1,513,229	+	irpB	Synpcc7942_1461	0.41	-1.2
1,513,229	+	irpB	Synpcc7942_1461	0.41	-0.1
1,513,230	-	irpB	Synpcc7942_1461	0.41	+1.4
1,513,240	+	irpB	Synpcc7942_1461	0.42	-0.7
1,513,248	-	irpB	Synpcc7942_1461	0.43	-0.6
1,513,248	-	irpB	Synpcc7942_1461	0.43	+0.9
1,513,248	-	irpB	Synpcc7942_1461	0.43	+0.3
1,513,276	-	irpB	Synpcc7942_1461	0.45	-0.9
1,513,281	-	irpB	Synpcc7942_1461	0.46	-0.9
1,513,327	+	irpB	Synpcc7942_1461	0.49	-0.2
1,513,382	-	irpB	Synpcc7942_1461	0.54	-0.3
1,513,394	+	irpB	Synpcc7942_1461	0.54	+0.0
1,513,394	+	irpB	Synpcc7942_1461	0.54	+0.2
1,513,402	-	irpB	Synpcc7942_1461	0.55	+0.3
1,513,402	-	irpB	Synpcc7942_1461	0.55	-0.6
1,513,415	+	irpB	Synpcc7942_1461	0.56	+1.2
1,513,415	+	irpB	Synpcc7942_1461	0.56	+0.2
1,513,415	+	irpB	Synpcc7942_1461	0.56	+0.1
1,513,415	+	irpB	Synpcc7942_1461	0.56	+1.1
1,513,415	+	irpB	Synpcc7942_1461	0.56	+0.1
1,513,415	+	irpB	Synpcc7942_1461	0.56	+0.2
1,513,415	+	irpB	Synpcc7942_1461	0.56	-1.2
1,513,415	+	irpB	Synpcc7942_1461	0.56	-0.0
1,513,423	-	irpB	Synpcc7942_1461	0.57	+0.1
1,513,423	-	irpB	Synpcc7942_1461	0.57	-0.5
1,513,423	-	irpB	Synpcc7942_1461	0.57	+0.4
1,513,460	-	irpB	Synpcc7942_1461	0.60	+0.7
1,513,460	-	irpB	Synpcc7942_1461	0.60	-0.6
1,513,483	+	irpB	Synpcc7942_1461	0.62	-0.2
1,513,485	-	irpB	Synpcc7942_1461	0.62	-0.0
1,513,519	+	irpB	Synpcc7942_1461	0.64	-0.9
1,513,529	+	irpB	Synpcc7942_1461	0.65	-0.3
1,513,529	+	irpB	Synpcc7942_1461	0.65	+0.9
1,513,537	-	irpB	Synpcc7942_1461	0.66	-0.1
1,513,537	-	irpB	Synpcc7942_1461	0.66	-0.8
1,513,563	-	irpB	Synpcc7942_1461	0.68	+1.0
1,513,576	-	irpB	Synpcc7942_1461	0.69	+0.5