Strain Fitness in Synechococcus elongatus PCC 7942 around Synpcc7942_1390

Experiment: BG11 with Cisplatin 0.05 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	BG11 with Cisplatin 0.05 mg/ml
1,435,510	+	psbAII	Synpcc7942_1389	0.90	-0.3
1,435,671	+				-0.3
1,435,838	-		Synpcc7942_1390	0.34	+0.1
1,435,903	-		Synpcc7942_1390	0.52	-1.4
1,436,002	+		Synpcc7942_1390	0.81	-1.0
1,436,094	+				+1.0
1,436,094	+				-0.3
1,436,094	+				-0.0
1,436,094	+				+0.8
1,436,096	+				-1.1
1,436,115	+				-0.4
1,436,154	-				+0.9
1,436,162	-				-1.5
1,436,165	+				+0.0
1,436,186	-				+0.3
1,436,196	-				+0.8
1,436,199	+				+0.3
1,436,199	+				+0.4
1,436,207	-				-0.6
1,436,246	+				-0.0
1,436,246	+				+0.4
1,436,256	+				-0.8
1,436,256	+				+0.2
1,436,264	-				+0.2
1,436,353	+	comM	Synpcc7942_1391	0.13	-0.7
1,436,353	+	comM	Synpcc7942_1391	0.13	+0.4
1,436,353	+	comM	Synpcc7942_1391	0.13	+0.2
1,436,372	+	comM	Synpcc7942_1391	0.14	+0.5
1,436,377	+	comM	Synpcc7942_1391	0.14	+0.4
1,436,380	-	comM	Synpcc7942_1391	0.15	+0.3
1,436,380	-	comM	Synpcc7942_1391	0.15	-1.0
1,436,380	-	comM	Synpcc7942_1391	0.15	+1.4
1,436,389	-	comM	Synpcc7942_1391	0.15	-1.1
1,436,397	-	comM	Synpcc7942_1391	0.16	+0.5
1,436,397	-	comM	Synpcc7942_1391	0.16	+0.9
1,436,425	+	comM	Synpcc7942_1391	0.18	+0.0
1,436,425	+	comM	Synpcc7942_1391	0.18	-0.7
1,436,425	+	comM	Synpcc7942_1391	0.18	+0.2
1,436,433	-	comM	Synpcc7942_1391	0.18	-0.1
1,436,433	-	comM	Synpcc7942_1391	0.18	-2.6
1,436,514	+				-1.1
1,436,564	-	comM	Synpcc7942_1391	0.27	+0.0
1,436,573	+	comM	Synpcc7942_1391	0.27	+0.8
1,436,573	+	comM	Synpcc7942_1391	0.27	-0.7
1,436,573	+	comM	Synpcc7942_1391	0.27	+0.7
1,436,598	+	comM	Synpcc7942_1391	0.29	-0.5
1,436,606	-	comM	Synpcc7942_1391	0.29	+0.1
1,436,613	-	comM	Synpcc7942_1391	0.30	-2.0
1,436,613	-	comM	Synpcc7942_1391	0.30	-1.6
1,436,620	+	comM	Synpcc7942_1391	0.30	-1.2
1,436,628	-	comM	Synpcc7942_1391	0.31	+0.8
1,436,628	-	comM	Synpcc7942_1391	0.31	+0.5
1,436,669	+	comM	Synpcc7942_1391	0.33	+1.0
1,436,669	+	comM	Synpcc7942_1391	0.33	-0.1
1,436,669	+	comM	Synpcc7942_1391	0.33	-1.4
1,436,669	+	comM	Synpcc7942_1391	0.33	+0.3
1,436,669	+	comM	Synpcc7942_1391	0.33	+0.0
1,436,674	+	comM	Synpcc7942_1391	0.34	+0.4
1,436,677	-	comM	Synpcc7942_1391	0.34	-0.1
1,436,677	-	comM	Synpcc7942_1391	0.34	+0.4
1,436,677	-	comM	Synpcc7942_1391	0.34	-0.1
1,436,677	-	comM	Synpcc7942_1391	0.34	-1.2
1,436,677	-	comM	Synpcc7942_1391	0.34	+0.2
1,436,677	-	comM	Synpcc7942_1391	0.34	-0.5
1,436,682	-	comM	Synpcc7942_1391	0.34	-0.1
1,436,682	-	comM	Synpcc7942_1391	0.34	+0.9
1,436,683	-	comM	Synpcc7942_1391	0.34	-0.6
1,436,687	+	comM	Synpcc7942_1391	0.35	+0.3
1,436,751	+	comM	Synpcc7942_1391	0.39	-0.3
1,436,756	+	comM	Synpcc7942_1391	0.39	+0.7
1,436,761	+	comM	Synpcc7942_1391	0.39	+1.0
1,436,803	+	comM	Synpcc7942_1391	0.42	-0.7
1,436,834	-	comM	Synpcc7942_1391	0.44	-0.2
1,436,866	-	comM	Synpcc7942_1391	0.46	+0.8
1,436,890	-	comM	Synpcc7942_1391	0.48	-0.2
1,436,906	-	comM	Synpcc7942_1391	0.49	+0.2
1,436,923	-	comM	Synpcc7942_1391	0.50	-0.8
1,436,926	-	comM	Synpcc7942_1391	0.50	-2.4
1,436,936	+	comM	Synpcc7942_1391	0.51	-0.0
1,436,952	+	comM	Synpcc7942_1391	0.52	+0.7
1,436,952	+	comM	Synpcc7942_1391	0.52	-0.8
1,436,980	+	comM	Synpcc7942_1391	0.54	-0.8
1,437,051	-				-0.1