Strain Fitness in Synechococcus elongatus PCC 7942 around Synpcc7942_1360

Experiment: BG11 with Cisplatin 0.05 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	BG11 with Cisplatin 0.05 mg/ml
1,399,581	+				+0.7
1,399,588	-				+0.7
1,399,588	-				+1.0
1,399,609	-				+0.6
1,399,676	-				+0.3
1,399,685	+				-1.1
1,399,685	+				-0.7
1,399,686	+				+0.1
1,399,694	+				-2.8
1,399,694	-				-0.2
1,399,739	+				-2.0
1,399,758	+				-4.0
1,399,759	-				-0.1
1,399,767	-				-3.1
1,399,822	+				-1.0
1,399,851	-				-2.2
1,400,006	-		Synpcc7942_1360	0.20	-2.4
1,400,587	-		Synpcc7942_1360	0.64	-1.4
1,400,587	-		Synpcc7942_1360	0.64	-4.3
1,400,589	+		Synpcc7942_1360	0.65	-4.5
1,400,699	+		Synpcc7942_1360	0.73	-3.1
1,400,725	+		Synpcc7942_1360	0.75	-2.0
1,400,730	+		Synpcc7942_1360	0.75	-0.6
1,400,730	+		Synpcc7942_1360	0.75	-1.6
1,400,733	-		Synpcc7942_1360	0.76	+0.0
1,400,733	-		Synpcc7942_1360	0.76	-0.9
1,400,787	+		Synpcc7942_1360	0.80	-2.1
1,400,795	-		Synpcc7942_1360	0.80	-1.9
1,400,797	+		Synpcc7942_1360	0.80	-0.8
1,400,807	+		Synpcc7942_1360	0.81	-0.2
1,400,815	-		Synpcc7942_1360	0.82	-2.3
1,400,815	-		Synpcc7942_1360	0.82	-0.6
1,400,819	+		Synpcc7942_1360	0.82	-2.3
1,400,854	+		Synpcc7942_1360	0.85	-0.5
1,400,861	+		Synpcc7942_1360	0.85	-1.0
1,400,871	+		Synpcc7942_1360	0.86	-1.4
1,400,871	+		Synpcc7942_1360	0.86	-0.9
1,400,874	-		Synpcc7942_1360	0.86	-1.8
1,400,879	-		Synpcc7942_1360	0.87	-2.2
1,400,879	-		Synpcc7942_1360	0.87	-0.0
1,400,879	-		Synpcc7942_1360	0.87	-0.7
1,400,879	-		Synpcc7942_1360	0.87	-0.4
1,400,882	+		Synpcc7942_1360	0.87	-0.3
1,400,898	+		Synpcc7942_1360	0.88	-0.3
1,400,923	-				-1.1
1,400,926	+				-0.7
1,400,962	+				-1.8
1,400,962	+				-2.4
1,400,965	-				-0.4
1,400,989	-				-1.5
1,401,040	+				+0.1
1,401,040	+				+0.4
1,401,052	+				-0.2
1,401,054	-				-1.2
1,401,059	+				-0.7
1,401,061	+				-0.3
1,401,080	+				+1.3
1,401,125	-				+0.2
1,401,153	+		Synpcc7942_1361	0.13	+0.5
1,401,156	+		Synpcc7942_1361	0.14	+0.4
1,401,233	-		Synpcc7942_1361	0.29	-0.4
1,401,289	-		Synpcc7942_1361	0.40	-0.2
1,401,325	-		Synpcc7942_1361	0.48	+1.0
1,401,355	+		Synpcc7942_1361	0.54	-0.0
1,401,355	+		Synpcc7942_1361	0.54	-0.0
1,401,355	+		Synpcc7942_1361	0.54	+0.9
1,401,355	+		Synpcc7942_1361	0.54	-0.0
1,401,355	+		Synpcc7942_1361	0.54	-1.0
1,401,363	-		Synpcc7942_1361	0.55	+0.9
1,401,363	-		Synpcc7942_1361	0.55	+0.1
1,401,363	-		Synpcc7942_1361	0.55	-0.3
1,401,365	+		Synpcc7942_1361	0.56	+0.5
1,401,367	+		Synpcc7942_1361	0.56	+0.7
1,401,375	-		Synpcc7942_1361	0.58	-1.1
1,401,395	+		Synpcc7942_1361	0.62	+0.2
1,401,400	+		Synpcc7942_1361	0.62	+0.3
1,401,400	+		Synpcc7942_1361	0.62	+0.6
1,401,408	-		Synpcc7942_1361	0.64	-1.6
1,401,419	+		Synpcc7942_1361	0.66	-0.6
1,401,419	+		Synpcc7942_1361	0.66	-0.1
1,401,425	-		Synpcc7942_1361	0.67	-0.2
1,401,431	+		Synpcc7942_1361	0.69	+0.0
1,401,462	+		Synpcc7942_1361	0.75	-0.1
1,401,543	+				+0.6
1,401,543	+				-1.1
1,401,562	+				+0.5
1,401,562	+				+0.2
1,401,571	+				+0.0
1,401,579	-				-1.1
1,401,579	-				+0.0
1,401,584	-				-1.2
1,401,605	-				+0.4
1,401,654	+				-0.0
1,401,662	-				-0.4
1,401,667	-				+0.1
1,401,688	+				-0.1
1,401,719	+				-0.1
1,401,741	-		Synpcc7942_1362	0.14	+0.5
1,401,743	+		Synpcc7942_1362	0.15	+1.4
1,401,743	+		Synpcc7942_1362	0.15	+0.1
1,401,743	+		Synpcc7942_1362	0.15	+0.4
1,401,743	+		Synpcc7942_1362	0.15	-2.1
1,401,743	+		Synpcc7942_1362	0.15	+1.5
1,401,743	+		Synpcc7942_1362	0.15	+1.6
1,401,743	+		Synpcc7942_1362	0.15	-0.3
1,401,751	-		Synpcc7942_1362	0.16	-0.1
1,401,766	+		Synpcc7942_1362	0.19	-0.7
1,401,779	-		Synpcc7942_1362	0.22	+0.5
1,401,786	+		Synpcc7942_1362	0.23	-0.3
1,401,829	+		Synpcc7942_1362	0.32	-0.1
1,401,837	-		Synpcc7942_1362	0.34	+0.2
1,401,837	-		Synpcc7942_1362	0.34	-0.3
1,401,862	+		Synpcc7942_1362	0.39	+0.2
1,401,862	+		Synpcc7942_1362	0.39	+0.5
1,401,878	-		Synpcc7942_1362	0.42	-0.3
1,401,890	-		Synpcc7942_1362	0.45	-0.4
1,401,901	-		Synpcc7942_1362	0.47	-0.4
1,401,901	-		Synpcc7942_1362	0.47	+1.1
1,401,927	+		Synpcc7942_1362	0.52	+0.5
1,401,940	-		Synpcc7942_1362	0.55	+0.6
1,401,950	+		Synpcc7942_1362	0.57	-1.0
1,401,956	+		Synpcc7942_1362	0.58	-0.6
1,402,002	-		Synpcc7942_1362	0.68	-1.8