Strain Fitness in Synechococcus elongatus PCC 7942 around Synpcc7942_1332

Experiment: BG11 with Cisplatin 0.05 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	BG11 with Cisplatin 0.05 mg/ml
1,362,487	+				+0.7
1,362,490	-				-0.2
1,362,497	-				+1.1
1,362,533	+				-1.1
1,362,535	+				-1.0
1,362,541	-				+0.5
1,362,543	-				+0.7
1,362,551	-				+0.6
1,362,576	+		Synpcc7942_1330	0.10	-0.4
1,362,576	+		Synpcc7942_1330	0.10	-0.4
1,362,579	-				+0.5
1,362,583	-		Synpcc7942_1330	0.11	+1.1
1,362,584	-		Synpcc7942_1330	0.12	+0.0
1,362,584	-		Synpcc7942_1330	0.12	-1.4
1,362,584	-		Synpcc7942_1330	0.12	+0.0
1,362,584	-		Synpcc7942_1330	0.12	-0.8
1,362,629	+		Synpcc7942_1330	0.18	+1.2
1,362,637	-		Synpcc7942_1330	0.20	+0.3
1,362,660	+		Synpcc7942_1330	0.23	+0.4
1,362,665	+		Synpcc7942_1330	0.24	+0.2
1,362,666	+		Synpcc7942_1330	0.24	-1.3
1,362,743	-		Synpcc7942_1330	0.36	-0.4
1,362,745	+		Synpcc7942_1330	0.36	+0.2
1,362,804	-		Synpcc7942_1330	0.45	+1.6
1,362,835	+		Synpcc7942_1330	0.50	-0.3
1,362,843	+		Synpcc7942_1330	0.51	-0.6
1,362,855	+		Synpcc7942_1330	0.53	+0.2
1,362,865	+		Synpcc7942_1330	0.54	-0.1
1,362,886	-		Synpcc7942_1330	0.58	+0.4
1,362,886	-		Synpcc7942_1330	0.58	-0.8
1,362,897	+		Synpcc7942_1330	0.59	-0.1
1,362,905	-		Synpcc7942_1330	0.60	+0.0
1,362,905	-		Synpcc7942_1330	0.60	+1.6
1,362,905	-		Synpcc7942_1330	0.60	-1.0
1,362,907	+		Synpcc7942_1330	0.61	+0.1
1,362,909	+		Synpcc7942_1330	0.61	-0.4
1,362,909	+		Synpcc7942_1330	0.61	-1.2
1,362,909	+		Synpcc7942_1330	0.61	+0.1
1,362,909	+		Synpcc7942_1330	0.61	-0.6
1,362,909	+		Synpcc7942_1330	0.61	-0.8
1,362,917	-		Synpcc7942_1330	0.62	+0.1
1,362,917	-		Synpcc7942_1330	0.62	-1.8
1,362,974	-		Synpcc7942_1330	0.71	+0.4
1,362,996	-		Synpcc7942_1330	0.74	-3.5
1,363,022	-		Synpcc7942_1330	0.78	+0.9
1,363,022	-		Synpcc7942_1330	0.78	-1.4
1,363,032	+		Synpcc7942_1330	0.80	-0.4
1,363,032	+		Synpcc7942_1330	0.80	-1.7
1,363,040	-		Synpcc7942_1330	0.81	+1.3
1,363,040	-		Synpcc7942_1330	0.81	-2.3
1,363,064	+		Synpcc7942_1330	0.85	+0.3
1,363,084	+		Synpcc7942_1330	0.88	-1.3
1,363,113	+				-0.9
1,363,134	+				+0.1
1,363,142	-				-1.0
1,363,149	+				-0.4
1,363,157	-				-0.0
1,363,157	-				-0.5
1,363,157	-				-0.7
1,363,157	-				-1.5
1,363,166	-				+0.4
1,363,167	-				-2.2
1,363,212	-				-0.9
1,363,250	+				+0.4
1,363,354	+		Synpcc7942_1331	0.36	-1.9
1,363,362	-		Synpcc7942_1331	0.41	-1.6
1,363,402	+		Synpcc7942_1331	0.63	-0.0
1,363,467	+				-1.4
1,363,469	-				-0.3
1,363,475	-				-0.3
1,363,485	-				+0.4
1,363,485	-				-1.1
1,363,490	-				-2.0
1,363,531	+				-1.5
1,363,539	-		Synpcc7942_1332	0.11	-3.9
1,363,552	-		Synpcc7942_1332	0.13	-0.9
1,363,557	+		Synpcc7942_1332	0.14	-2.6
1,363,589	+		Synpcc7942_1332	0.19	-2.3
1,363,597	-		Synpcc7942_1332	0.20	-3.1
1,363,616	-		Synpcc7942_1332	0.23	-2.6
1,363,631	-		Synpcc7942_1332	0.26	-1.4
1,363,668	+		Synpcc7942_1332	0.32	-1.5
1,363,681	+		Synpcc7942_1332	0.34	-3.9
1,363,692	+		Synpcc7942_1332	0.36	-1.7
1,363,692	+		Synpcc7942_1332	0.36	-1.6
1,363,700	-		Synpcc7942_1332	0.37	-1.9
1,363,749	+		Synpcc7942_1332	0.45	-4.0
1,363,770	+		Synpcc7942_1332	0.48	-0.7
1,363,770	+		Synpcc7942_1332	0.48	-3.9
1,363,771	+		Synpcc7942_1332	0.48	-0.5
1,363,779	-		Synpcc7942_1332	0.50	-2.3
1,363,802	-		Synpcc7942_1332	0.53	-0.8
1,363,829	+		Synpcc7942_1332	0.58	-2.7
1,363,873	+		Synpcc7942_1332	0.65	-1.6
1,363,881	-		Synpcc7942_1332	0.66	-1.1
1,363,938	+		Synpcc7942_1332	0.75	-3.0
1,363,942	+		Synpcc7942_1332	0.76	-2.1
1,363,985	-		Synpcc7942_1332	0.83	-2.7
1,363,985	-		Synpcc7942_1332	0.83	-3.1
1,363,989	+		Synpcc7942_1332	0.83	-2.3
1,364,108	-				-2.2
1,364,131	-				-2.2
1,364,145	+				-2.0
1,364,172	-		Synpcc7942_1333	0.12	-0.4
1,364,189	+		Synpcc7942_1333	0.14	-2.4
1,364,204	-		Synpcc7942_1333	0.16	-2.0
1,364,259	-		Synpcc7942_1333	0.24	-3.3
1,364,307	-		Synpcc7942_1333	0.31	-2.4
1,364,312	-		Synpcc7942_1333	0.32	-1.8
1,364,465	+		Synpcc7942_1333	0.54	-1.9
1,364,553	+		Synpcc7942_1333	0.66	-1.5
1,364,561	-		Synpcc7942_1333	0.68	-3.0
1,364,630	-		Synpcc7942_1333	0.77	-2.8
1,364,676	-		Synpcc7942_1333	0.84	-1.4
1,365,024	+	trpE	Synpcc7942_1334	0.17	-1.6