Strain Fitness in Synechococcus elongatus PCC 7942 around Synpcc7942_1241

Experiment: BG11 with Cisplatin 0.05 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	BG11 with Cisplatin 0.05 mg/ml
1,264,291	-	nirA	Synpcc7942_1240	0.67	+1.6
1,264,965	+				-0.4
1,264,968	-				-0.0
1,264,973	-				+1.0
1,265,073	-				-0.2
1,265,083	-				+0.0
1,265,111	+				-1.8
1,265,111	+				-0.7
1,265,120	-				+0.7
1,265,157	+				-1.7
1,265,215	+	nirB	Synpcc7942_1241	0.12	-1.0
1,265,434	-	nirB	Synpcc7942_1241	0.33	-1.2
1,265,508	+	nirB	Synpcc7942_1241	0.40	-3.1
1,265,612	-	nirB	Synpcc7942_1241	0.50	-0.9
1,265,629	-	nirB	Synpcc7942_1241	0.52	-0.4
1,265,710	-	nirB	Synpcc7942_1241	0.59	-3.2
1,265,710	-	nirB	Synpcc7942_1241	0.59	-1.0
1,265,720	-	nirB	Synpcc7942_1241	0.60	-2.6
1,265,828	-	nirB	Synpcc7942_1241	0.70	-0.7
1,266,002	+	nirB	Synpcc7942_1241	0.87	-1.3
1,266,007	+	nirB	Synpcc7942_1241	0.88	-2.4
1,266,054	+				+1.3
1,266,056	+				-0.4
1,266,062	-				-0.7
1,266,064	-				-2.2
1,266,104	+				+0.9
1,266,104	+				-0.5
1,266,111	-				-0.9
1,266,111	-				-1.8
1,266,132	+				-0.4
1,266,142	+				-1.1
1,266,150	-				-0.5
1,266,191	+				-0.6
1,266,232	+	ntcB	Synpcc7942_1242	0.11	+1.1
1,266,232	+	ntcB	Synpcc7942_1242	0.11	-0.4
1,266,239	+	ntcB	Synpcc7942_1242	0.12	+0.2
1,266,247	-	ntcB	Synpcc7942_1242	0.13	+0.9
1,266,261	-	ntcB	Synpcc7942_1242	0.14	-2.1
1,266,263	+	ntcB	Synpcc7942_1242	0.15	-1.0
1,266,276	-	ntcB	Synpcc7942_1242	0.16	-1.5
1,266,354	-	ntcB	Synpcc7942_1242	0.24	-1.2
1,266,482	+	ntcB	Synpcc7942_1242	0.38	-2.9
1,266,503	-	ntcB	Synpcc7942_1242	0.40	-1.0
1,266,632	+	ntcB	Synpcc7942_1242	0.54	-2.0
1,266,650	-	ntcB	Synpcc7942_1242	0.56	+0.9
1,266,677	-	ntcB	Synpcc7942_1242	0.59	-1.8
1,266,686	-	ntcB	Synpcc7942_1242	0.60	+0.2
1,266,739	-	ntcB	Synpcc7942_1242	0.66	-0.4
1,266,768	+	ntcB	Synpcc7942_1242	0.69	+0.9
1,266,776	-	ntcB	Synpcc7942_1242	0.70	-3.2
1,266,808	-	ntcB	Synpcc7942_1242	0.73	-3.4
1,266,840	+	ntcB	Synpcc7942_1242	0.77	-1.4
1,266,862	-	ntcB	Synpcc7942_1242	0.79	-0.5
1,266,892	-	ntcB	Synpcc7942_1242	0.82	-0.5
1,266,909	+	ntcB	Synpcc7942_1242	0.84	+0.3
1,266,909	+	ntcB	Synpcc7942_1242	0.84	+0.1
1,266,912	-	ntcB	Synpcc7942_1242	0.84	-0.4
1,266,917	-	ntcB	Synpcc7942_1242	0.85	-1.7
1,266,938	+	ntcB	Synpcc7942_1242	0.87	-0.7
1,266,948	+	ntcB	Synpcc7942_1242	0.88	-0.7
1,266,948	+	ntcB	Synpcc7942_1242	0.88	-0.9
1,266,994	+				+0.3
1,267,051	+				-0.4
1,267,051	+				-0.5
1,267,051	+				-0.2
1,267,051	+				-0.4
1,267,051	+				+0.8
1,267,051	+				+0.7
1,267,051	+				-0.6
1,267,059	-				+0.8
1,267,059	-				+0.4
1,267,059	-				+0.7
1,267,059	-				+1.5
1,267,059	-				+0.1
1,267,059	-				-0.0
1,267,059	-				-0.2
1,267,059	-				-0.0
1,267,059	-				+0.1
1,267,070	-				-0.7
1,267,079	-				+1.2
1,267,106	+				-1.6