Strain Fitness in Synechococcus elongatus PCC 7942 around Synpcc7942_1192

Experiment: BG11 with Cisplatin 0.05 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	BG11 with Cisplatin 0.05 mg/ml
1,220,019	-	lap	Synpcc7942_1190	0.89	+1.0
1,220,021	+	lap	Synpcc7942_1190	0.89	+1.4
1,220,068	+				-0.5
1,220,098	-				-0.1
1,220,112	+				+0.5
1,220,113	-				+0.8
1,220,120	-				-1.3
1,220,123	+				+0.3
1,220,124	+				-0.1
1,220,131	-				+0.2
1,220,131	-				+0.8
1,220,137	-				+0.4
1,220,140	+				+0.6
1,220,143	-				-0.3
1,220,144	+				+0.1
1,220,145	+				+0.8
1,220,154	-				+1.0
1,220,154	-				+0.3
1,220,154	-				-0.2
1,220,214	-				+0.9
1,220,218	+				-1.6
1,220,220	+				+0.6
1,220,225	+				-1.0
1,220,233	-				+0.2
1,220,248	+				-0.4
1,220,248	+				-1.1
1,220,254	-				+1.2
1,220,265	+				+0.1
1,220,270	+				+0.3
1,220,278	-				-0.7
1,220,278	-				-0.4
1,220,282	+				+0.6
1,220,286	+				+0.0
1,220,297	-				-0.7
1,220,308	+				-0.7
1,220,316	-				-1.4
1,220,316	-				+1.3
1,220,933	+				+0.8
1,220,940	-				+0.6
1,220,962	-				+0.7
1,221,020	+				-0.1
1,221,059	-		Synpcc7942_1192	0.12	-0.8
1,221,061	+		Synpcc7942_1192	0.12	-0.7
1,221,102	+		Synpcc7942_1192	0.19	-1.2
1,221,122	-		Synpcc7942_1192	0.22	-0.9
1,221,122	-		Synpcc7942_1192	0.22	-1.3
1,221,157	+		Synpcc7942_1192	0.28	-2.1
1,221,165	-		Synpcc7942_1192	0.29	-1.2
1,221,202	+		Synpcc7942_1192	0.36	-0.9
1,221,215	-		Synpcc7942_1192	0.38	-2.7
1,221,232	-		Synpcc7942_1192	0.41	-0.5
1,221,245	+		Synpcc7942_1192	0.43	+0.7
1,221,245	+		Synpcc7942_1192	0.43	-0.4
1,221,250	+		Synpcc7942_1192	0.44	-2.8
1,221,253	-		Synpcc7942_1192	0.44	-1.4
1,221,253	-		Synpcc7942_1192	0.44	-0.6
1,221,253	-		Synpcc7942_1192	0.44	-2.8
1,221,253	-		Synpcc7942_1192	0.44	-0.8
1,221,253	-		Synpcc7942_1192	0.44	-0.9
1,221,317	+		Synpcc7942_1192	0.55	-1.0
1,221,317	+		Synpcc7942_1192	0.55	-0.7
1,221,325	-		Synpcc7942_1192	0.56	-1.5
1,221,390	+		Synpcc7942_1192	0.67	-1.9
1,221,403	-		Synpcc7942_1192	0.70	-3.2
1,221,495	+		Synpcc7942_1192	0.85	-2.0
1,221,498	+		Synpcc7942_1192	0.86	-0.7
1,221,512	-		Synpcc7942_1192	0.88	-0.7
1,221,551	-				-1.7
1,221,626	-				-2.1
1,221,673	+				+0.5
1,221,673	+				-0.1
1,221,673	+				-0.5
1,221,674	+				-0.9
1,221,681	-				+0.1
1,221,681	-				+0.2
1,221,681	-				-1.4
1,221,681	-				-0.1
1,221,682	-				-1.0
1,221,736	+				+0.5
1,221,750	+		Synpcc7942_1193	0.10	-0.4
1,221,763	-		Synpcc7942_1193	0.12	+1.1
1,222,417	-				-0.5
1,222,420	+				+0.8
1,222,420	+				-0.8
1,222,427	-				+0.1
1,222,440	+				+0.3
1,222,440	+				+1.3
1,222,448	-				+0.5
1,222,448	-				+1.3
1,222,451	+				+1.1
1,222,467	+				+0.8
1,222,467	-				-0.1
1,222,485	+				-0.2
1,222,485	+				+0.3
1,222,537	+				-1.0
1,222,542	+				+0.3
1,222,542	+				+0.0
1,222,545	-				-0.1
1,222,545	-				+0.1
1,222,551	-				+0.1
1,222,551	-				-0.5
1,222,577	+				+0.0
1,222,577	+				+0.3