Strain Fitness in Synechococcus elongatus PCC 7942 around Synpcc7942_1137

Experiment: BG11 with Cisplatin 0.05 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	BG11 with Cisplatin 0.05 mg/ml
1,159,762	+	pepN	Synpcc7942_1136	0.67	-0.7
1,159,786	+	pepN	Synpcc7942_1136	0.68	+0.4
1,159,832	+	pepN	Synpcc7942_1136	0.69	+1.6
1,159,832	+	pepN	Synpcc7942_1136	0.69	+0.1
1,159,832	+	pepN	Synpcc7942_1136	0.69	-0.1
1,159,863	+	pepN	Synpcc7942_1136	0.71	+0.5
1,159,873	+	pepN	Synpcc7942_1136	0.71	+0.5
1,159,879	+	pepN	Synpcc7942_1136	0.71	+0.9
1,159,887	-	pepN	Synpcc7942_1136	0.72	+0.3
1,159,904	+	pepN	Synpcc7942_1136	0.72	+1.0
1,159,904	+	pepN	Synpcc7942_1136	0.72	-0.7
1,159,904	+	pepN	Synpcc7942_1136	0.72	-1.8
1,159,912	-				+1.8
1,159,912	-	pepN	Synpcc7942_1136	0.73	+0.8
1,159,912	-	pepN	Synpcc7942_1136	0.73	+1.9
1,159,912	-	pepN	Synpcc7942_1136	0.73	+1.1
1,159,912	-	pepN	Synpcc7942_1136	0.73	+0.5
1,159,912	-	pepN	Synpcc7942_1136	0.73	+1.6
1,159,949	+	pepN	Synpcc7942_1136	0.74	+0.6
1,159,957	-	pepN	Synpcc7942_1136	0.74	-0.8
1,159,993	-	pepN	Synpcc7942_1136	0.76	+0.0
1,160,027	+	pepN	Synpcc7942_1136	0.77	-0.0
1,160,027	+	pepN	Synpcc7942_1136	0.77	+2.2
1,160,035	-	pepN	Synpcc7942_1136	0.77	-0.3
1,160,068	-	pepN	Synpcc7942_1136	0.79	-0.0
1,160,073	+	pepN	Synpcc7942_1136	0.79	-1.3
1,160,100	-	pepN	Synpcc7942_1136	0.80	+0.5
1,160,120	+	pepN	Synpcc7942_1136	0.81	+0.1
1,160,120	+	pepN	Synpcc7942_1136	0.81	-0.2
1,160,126	-	pepN	Synpcc7942_1136	0.81	+0.1
1,160,130	+	pepN	Synpcc7942_1136	0.81	-0.5
1,160,152	+	pepN	Synpcc7942_1136	0.82	-2.6
1,160,153	+	pepN	Synpcc7942_1136	0.82	+0.8
1,160,153	+	pepN	Synpcc7942_1136	0.82	-0.1
1,160,161	-	pepN	Synpcc7942_1136	0.82	-0.4
1,160,161	-	pepN	Synpcc7942_1136	0.82	-0.0
1,160,163	-	pepN	Synpcc7942_1136	0.82	+0.1
1,160,184	-	pepN	Synpcc7942_1136	0.83	+0.1
1,160,222	-	pepN	Synpcc7942_1136	0.84	+1.1
1,160,223	-	pepN	Synpcc7942_1136	0.85	-0.5
1,160,223	-	pepN	Synpcc7942_1136	0.85	+0.5
1,160,223	-	pepN	Synpcc7942_1136	0.85	+0.7
1,160,246	-	pepN	Synpcc7942_1136	0.85	-0.6
1,160,260	-	pepN	Synpcc7942_1136	0.86	+0.6
1,160,337	+	pepN	Synpcc7942_1136	0.89	+0.7
1,160,350	+	pepN	Synpcc7942_1136	0.89	+1.1
1,160,358	-	pepN	Synpcc7942_1136	0.90	+0.4
1,160,405	-				-0.1
1,160,423	+				-0.7
1,160,423	+				+0.9
1,160,425	+				-0.2
1,160,425	+				-0.4
1,160,425	+				+0.2
1,160,425	+				+0.4
1,160,425	+				+1.3
1,160,425	+				-0.0
1,160,425	+				+0.5
1,160,425	+				-0.3
1,160,431	-				+0.8
1,160,433	-				+1.1
1,160,433	-				-0.5
1,160,433	-				-0.1
1,160,433	-				+1.4
1,160,433	-				+0.8
1,160,433	-				+0.9
1,160,433	-				-0.1
1,160,433	-				+0.5
1,160,433	-				-0.7
1,160,433	-				+0.5
1,160,433	-				-0.1
1,160,433	-				-0.0
1,160,435	+				+0.2
1,160,443	+				+0.7
1,160,444	-				-0.1
1,160,451	-				+2.1
1,160,453	+				+0.5
1,160,453	+				-0.0
1,160,457	+				-1.1
1,160,526	+				-1.9
1,160,534	-				+0.3
1,160,534	-				+0.3
1,160,652	-				-0.1
1,160,727	+				-1.7
1,160,759	+				+1.5
1,160,776	-				-0.9
1,160,789	+				+0.1
1,160,807	+				-0.2
1,160,849	+	ycf23	Synpcc7942_1137	0.12	-1.6
1,160,933	+	ycf23	Synpcc7942_1137	0.23	-2.6
1,160,945	+	ycf23	Synpcc7942_1137	0.24	-1.2
1,160,981	+	ycf23	Synpcc7942_1137	0.29	-0.2
1,161,012	-	ycf23	Synpcc7942_1137	0.33	-1.3
1,161,013	+	ycf23	Synpcc7942_1137	0.34	-0.7
1,161,023	+	ycf23	Synpcc7942_1137	0.35	-0.4
1,161,062	+	ycf23	Synpcc7942_1137	0.40	-1.8
1,161,132	+	ycf23	Synpcc7942_1137	0.50	-0.2
1,161,140	-	ycf23	Synpcc7942_1137	0.51	-3.1
1,161,140	-	ycf23	Synpcc7942_1137	0.51	-0.7
1,161,140	-	ycf23	Synpcc7942_1137	0.51	-1.9
1,161,171	+	ycf23	Synpcc7942_1137	0.55	-1.7
1,161,188	-	ycf23	Synpcc7942_1137	0.57	-2.5
1,161,190	+	ycf23	Synpcc7942_1137	0.57	+0.8
1,161,253	+	ycf23	Synpcc7942_1137	0.66	-1.4
1,161,284	-	ycf23	Synpcc7942_1137	0.70	-2.1
1,161,284	-	ycf23	Synpcc7942_1137	0.70	-1.4
1,161,374	-	ycf23	Synpcc7942_1137	0.82	-1.9
1,161,483	+				+0.2
1,161,498	+				-1.4
1,161,498	+				-2.6
1,161,506	-				+0.7
1,161,507	-				-2.0
1,161,534	+				-2.4
1,161,565	+				+0.4
1,161,585	-				-0.9
1,161,588	-				-0.9
1,161,603	+				-0.1
1,161,603	+				+1.1
1,161,611	-				+0.8
1,161,611	-				-0.2
1,161,611	-				-0.6
1,161,615	+				+0.9