Strain Fitness in Synechococcus elongatus PCC 7942 around Synpcc7942_0106
Experiment: BG11 with Cisplatin 0.05 mg/ml
Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.
Per-strain Table
Position | Strand | Gene | LocusTag | Fraction | BG11 with Cisplatin 0.05 mg/ml |
---|---|---|---|---|---|
remove | |||||
106,379 | - | +0.3 | |||
106,396 | + | -0.1 | |||
106,396 | + | -0.3 | |||
106,396 | + | -0.7 | |||
106,404 | - | -0.3 | |||
106,410 | - | -0.4 | |||
106,763 | - | nadD | Synpcc7942_0106 | 0.67 | -0.9 |
106,763 | - | nadD | Synpcc7942_0106 | 0.67 | -0.7 |
106,801 | - | nadD | Synpcc7942_0106 | 0.74 | -1.6 |
106,829 | + | nadD | Synpcc7942_0106 | 0.79 | -1.4 |
106,837 | - | nadD | Synpcc7942_0106 | 0.80 | -1.3 |
106,892 | - | nadD | Synpcc7942_0106 | 0.89 | +1.3 |
106,935 | + | +0.2 | |||
106,954 | + | +1.3 | |||
106,955 | - | -1.1 | |||
107,004 | + | -0.1 | |||
107,030 | + | -0.0 | |||
107,038 | - | -1.5 | |||
107,040 | + | -0.3 | |||
107,079 | + | -2.2 |
Or see this region's nucleotide sequence