Strain Fitness in Pantoea sp. MT58 around IAI47_13755

Experiment: Survival; Treatment=FW300 (pH7.4) with 5.0 mM Glucose; TreatmentDuration=24hrs; Outgrowth=LBkan50

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Survival; Treatment=FW300 (pH7.4) with 5.0 mM Glucose; TreatmentDuration=24hrs; Outgrowth=LBkan50
2,912,525	-				+2.2
2,912,529	-				+2.2
2,912,604	-				+0.0
2,912,675	-				+1.1
2,912,675	-				+2.6
2,912,675	-				+1.9
2,912,720	-				+4.7
2,912,720	-				+2.2
2,912,729	-				+2.2
2,912,729	-				+1.2
2,912,729	-				+0.2
2,912,742	-				+3.3
2,912,789	+				+1.9
2,912,790	-				+0.6
2,912,790	-				+2.5
2,912,790	-				+0.9
2,912,790	-				+2.8
2,912,794	+				+2.5
2,912,795	-				+1.2
2,912,795	-				+1.1
2,912,795	-				+1.3
2,912,795	-				+0.2
2,913,063	-		IAI47_13750	0.38	+1.4
2,913,063	-		IAI47_13750	0.38	+3.1
2,913,070	+		IAI47_13750	0.39	+2.0
2,913,070	+		IAI47_13750	0.39	+2.8
2,913,070	+		IAI47_13750	0.39	+3.1
2,913,071	-		IAI47_13750	0.39	+1.6
2,913,071	-		IAI47_13750	0.39	+2.6
2,913,071	-		IAI47_13750	0.39	+2.8
2,913,071	-		IAI47_13750	0.39	+3.6
2,913,071	-		IAI47_13750	0.39	+2.4
2,913,071	-		IAI47_13750	0.39	+1.4
2,913,170	-		IAI47_13750	0.53	+3.1
2,913,179	-		IAI47_13750	0.54	+2.8
2,913,281	+		IAI47_13750	0.68	+2.8
2,913,282	-		IAI47_13750	0.68	+2.8
2,913,285	-		IAI47_13750	0.69	+3.2
2,913,442	+				+3.2
2,913,443	-				+1.7
2,913,443	-				+2.9
2,913,443	-				+3.6
2,913,443	-				+1.4
2,913,482	-				+3.8
2,913,526	-				+1.3
2,913,528	+				+1.7
2,913,532	+				+2.5
2,913,533	-				+1.4
2,913,615	+				+3.9
2,913,616	-				+2.6
2,913,697	-				+1.3
2,913,760	+		IAI47_13755	0.13	+2.1
2,913,770	-		IAI47_13755	0.14	+1.4
2,913,873	-		IAI47_13755	0.20	+0.9
2,913,938	-		IAI47_13755	0.23	+2.4
2,913,938	-		IAI47_13755	0.23	+0.7
2,913,940	+		IAI47_13755	0.24	+2.4
2,913,941	-		IAI47_13755	0.24	+1.1
2,913,941	-		IAI47_13755	0.24	+1.8
2,913,941	-		IAI47_13755	0.24	+1.9
2,914,021	+		IAI47_13755	0.28	+2.9
2,914,022	-		IAI47_13755	0.28	-0.2
2,914,084	+		IAI47_13755	0.32	+1.3
2,914,116	-		IAI47_13755	0.34	+1.8
2,914,116	-		IAI47_13755	0.34	+1.9
2,914,227	+		IAI47_13755	0.40	+2.4
2,914,227	+		IAI47_13755	0.40	+2.4
2,914,228	-		IAI47_13755	0.40	+0.8
2,914,228	-		IAI47_13755	0.40	+2.0
2,914,643	-		IAI47_13755	0.63	+1.5
2,914,666	-		IAI47_13755	0.65	+1.8
2,914,670	-		IAI47_13755	0.65	+1.3
2,914,670	-		IAI47_13755	0.65	+3.2
2,914,670	-		IAI47_13755	0.65	+2.5
2,914,717	-		IAI47_13755	0.68	+1.1
2,914,797	+		IAI47_13755	0.72	+2.9
2,914,798	-		IAI47_13755	0.72	+2.7
2,914,798	-		IAI47_13755	0.72	+2.0
2,914,842	+		IAI47_13755	0.75	+1.5
2,914,871	-		IAI47_13755	0.76	+1.9
2,914,892	-		IAI47_13755	0.77	+3.2
2,915,029	+		IAI47_13755	0.85	+2.9
2,915,029	+		IAI47_13755	0.85	+2.2
2,915,029	+		IAI47_13755	0.85	+1.6
2,915,030	-		IAI47_13755	0.85	+1.6
2,915,030	-		IAI47_13755	0.85	+2.1
2,915,030	-		IAI47_13755	0.85	+1.6
2,915,030	-		IAI47_13755	0.85	+2.1
2,915,030	-		IAI47_13755	0.85	+2.1
2,915,030	-		IAI47_13755	0.85	+1.5
2,915,030	-		IAI47_13755	0.85	+3.1
2,915,030	-		IAI47_13755	0.85	+2.7
2,915,031	+		IAI47_13755	0.85	+2.4
2,915,031	+		IAI47_13755	0.85	+2.1
2,915,032	-		IAI47_13755	0.85	+2.3
2,915,032	-		IAI47_13755	0.85	+2.9
2,915,032	-		IAI47_13755	0.85	+1.4
2,915,059	-		IAI47_13755	0.87	+0.9
2,915,059	-		IAI47_13755	0.87	+3.7
2,915,083	-		IAI47_13755	0.88	+2.4
2,915,083	-		IAI47_13755	0.88	+1.8
2,915,083	-		IAI47_13755	0.88	+2.8
2,915,083	-		IAI47_13755	0.88	+3.5
2,915,083	-		IAI47_13755	0.88	+2.3
2,915,086	+		IAI47_13755	0.88	+1.9
2,915,087	-		IAI47_13755	0.88	+1.5
2,915,087	-		IAI47_13755	0.88	+2.4
2,915,087	-		IAI47_13755	0.88	+1.9
2,915,087	-		IAI47_13755	0.88	+1.8
2,915,102	-		IAI47_13755	0.89	+2.4
2,915,114	-				+2.5
2,915,114	-				+1.1
2,915,117	-				+1.3
2,915,132	-				+0.8
2,915,151	-				+1.7
2,915,151	-				+3.0
2,915,320	-				+0.8
2,915,328	+		IAI47_13760	0.11	+1.5
2,915,391	+		IAI47_13760	0.29	+2.4
2,915,392	-		IAI47_13760	0.29	-0.5
2,915,392	-		IAI47_13760	0.29	+2.1
2,915,505	+		IAI47_13760	0.61	+1.8
2,915,505	+		IAI47_13760	0.61	+2.4
2,915,505	+		IAI47_13760	0.61	+3.6
2,915,506	-		IAI47_13760	0.62	+3.4
2,915,545	-		IAI47_13760	0.73	+3.7
2,915,554	-		IAI47_13760	0.76	+3.5
2,915,554	-		IAI47_13760	0.76	+2.2
2,915,554	-		IAI47_13760	0.76	+1.8
2,915,561	-		IAI47_13760	0.78	+1.7
2,915,634	-				+3.2
2,915,634	-				+1.1
2,915,639	-				+1.5
2,915,748	+		IAI47_13765	0.30	+4.2
2,915,749	-		IAI47_13765	0.30	+2.1
2,915,749	-		IAI47_13765	0.30	+2.4
2,915,749	-		IAI47_13765	0.30	+2.4
2,915,902	-		IAI47_13765	0.69	+1.9
2,915,902	-		IAI47_13765	0.69	+1.9
2,915,918	-		IAI47_13765	0.73	+3.0
2,915,918	-		IAI47_13765	0.73	+2.5
2,915,948	-		IAI47_13765	0.81	+1.5
2,916,120	+				+3.3
2,916,121	-				+3.5
2,916,121	-				+0.8
2,916,186	+				+1.9
2,916,188	+				+3.7
2,916,189	-				+3.0
2,916,233	+				+0.8
2,916,233	+				+2.6
2,916,235	+				+1.9
2,916,244	+				+2.3
2,916,244	+				+2.7
2,916,244	+				+0.9
2,916,244	+				+2.4
2,916,245	-				+0.5
2,916,258	+				+1.2
2,916,280	+				-1.3