Strain Fitness in Pantoea sp. MT58 around IAI47_00475

Experiment: Survival; Treatment=FW300 (pH7.4) with 5.0 mM Glucose; TreatmentDuration=24hrs; Outgrowth=LBkan50

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Survival; Treatment=FW300 (pH7.4) with 5.0 mM Glucose; TreatmentDuration=24hrs; Outgrowth=LBkan50
106,600	+				-0.9
106,623	+				-0.3
106,714	+				-1.6
106,741	+				-0.9
106,742	-				+0.1
106,742	-				-0.3
106,762	+				+0.9
106,762	+				-0.1
106,772	+				+1.9
106,772	+				-2.3
106,772	+				-1.3
106,772	+				-0.1
106,772	+				-1.3
106,773	-				-1.3
106,773	-				-0.8
106,784	+				+0.4
106,784	+				+0.0
106,785	-				-1.2
106,785	-				-0.6
106,792	-				+2.0
106,792	-				-0.1
106,837	+				+4.3
106,837	+				+0.8
106,838	-				-0.6
106,838	-				+0.3
106,838	-				-0.3
106,838	-				+0.3
106,857	+				-0.6
106,858	-				-1.6
106,883	-				-1.6
106,883	-				+2.3
106,883	-				+0.7
106,901	-				-0.3
106,947	+				-0.1
106,948	-				-0.5
106,954	-				-1.6
106,956	+				+1.0
106,957	-				-2.5
106,957	-				-0.4
106,957	-				-1.5
106,990	+				-1.2
106,990	+				-0.5
106,990	+				+2.2
106,990	+				-0.8
106,990	+				-2.1
106,990	+				+0.7
106,990	+				+0.2
106,990	+				+2.3
106,990	+				-0.1
106,990	+				+0.6
106,990	+				-0.8
106,991	-				-1.3
106,991	-				-0.6
106,991	-				+0.4
106,991	-				-0.7
106,991	-				-1.0
106,991	-				-1.8
106,991	-				-0.0
106,991	-				+1.4
106,991	-				-0.1
106,991	-				-2.6
106,991	-				-0.7
106,991	-				-0.2
106,991	-				-0.2
106,992	+				+1.0
106,992	+				-1.4
106,992	+				+1.6
106,992	+				+0.3
106,992	+				-0.1
106,993	-				+0.1
106,993	-				-1.0
106,993	-				+1.5
106,993	-				-1.2
106,993	-				+0.8
106,993	-				+2.5
107,016	+				+0.4
107,016	+				+1.0
107,016	+				-0.9
107,016	+				-0.6
107,017	-				+0.1
107,017	-				-1.0
107,061	+		IAI47_00470	0.13	+2.0
107,062	-		IAI47_00470	0.13	-2.6
107,062	-		IAI47_00470	0.13	-2.4
107,070	-		IAI47_00470	0.14	-1.7
107,084	+		IAI47_00470	0.17	+1.0
107,084	+		IAI47_00470	0.17	+1.7
107,084	+		IAI47_00470	0.17	+0.1
107,084	+		IAI47_00470	0.17	-0.5
107,085	-		IAI47_00470	0.17	+0.0
107,085	-		IAI47_00470	0.17	+2.3
107,194	+		IAI47_00470	0.35	-0.2
107,194	+		IAI47_00470	0.35	+1.6
107,194	+		IAI47_00470	0.35	+0.6
107,194	+		IAI47_00470	0.35	-1.2
107,194	+		IAI47_00470	0.35	+0.2
107,194	+		IAI47_00470	0.35	+0.1
107,194	+		IAI47_00470	0.35	+1.1
107,194	+		IAI47_00470	0.35	-0.3
107,195	-		IAI47_00470	0.35	-1.3
107,195	-		IAI47_00470	0.35	-2.6
107,195	-		IAI47_00470	0.35	-1.9
107,195	-		IAI47_00470	0.35	+1.2
107,195	-		IAI47_00470	0.35	+2.3
107,259	-		IAI47_00470	0.46	-1.8
107,259	-		IAI47_00470	0.46	+1.0
107,294	+		IAI47_00470	0.52	-1.1
107,294	+		IAI47_00470	0.52	-0.5
107,294	+		IAI47_00470	0.52	+0.2
107,294	+		IAI47_00470	0.52	-0.3
107,294	+		IAI47_00470	0.52	+1.3
107,295	-		IAI47_00470	0.52	-1.1
107,295	-		IAI47_00470	0.52	-2.7
107,305	-		IAI47_00470	0.54	-0.8
107,305	-		IAI47_00470	0.54	-0.3
107,318	+		IAI47_00470	0.56	-0.3
107,318	+		IAI47_00470	0.56	-1.7
107,318	+		IAI47_00470	0.56	-0.4
107,318	+		IAI47_00470	0.56	-0.9
107,318	+		IAI47_00470	0.56	-0.1
107,318	+		IAI47_00470	0.56	+1.4
107,318	+		IAI47_00470	0.56	+0.1
107,318	+		IAI47_00470	0.56	+2.0
107,318	+		IAI47_00470	0.56	-0.8
107,318	+		IAI47_00470	0.56	-0.4
107,319	-		IAI47_00470	0.56	-0.8
107,319	-		IAI47_00470	0.56	-0.2
107,319	-		IAI47_00470	0.56	-0.9
107,319	-		IAI47_00470	0.56	-3.2
107,319	-		IAI47_00470	0.56	-2.1
107,319	-		IAI47_00470	0.56	-0.3
107,319	-		IAI47_00470	0.56	-1.2
107,319	-		IAI47_00470	0.56	-1.0
107,319	-		IAI47_00470	0.56	-1.2
107,319	-		IAI47_00470	0.56	-0.6
107,370	+		IAI47_00470	0.65	+0.4
107,371	-		IAI47_00470	0.65	-0.7
107,378	-		IAI47_00470	0.66	+1.9
107,393	+		IAI47_00470	0.69	+1.1
107,393	+		IAI47_00470	0.69	-0.9
107,393	+		IAI47_00470	0.69	-1.5
107,393	+		IAI47_00470	0.69	-1.8
107,393	+		IAI47_00470	0.69	+1.4
107,393	+		IAI47_00470	0.69	+1.1
107,393	+		IAI47_00470	0.69	+0.9
107,393	+		IAI47_00470	0.69	+1.7
107,393	+		IAI47_00470	0.69	-1.0
107,393	+		IAI47_00470	0.69	-0.6
107,394	-		IAI47_00470	0.69	-0.7
107,394	-		IAI47_00470	0.69	-0.6
107,394	-		IAI47_00470	0.69	-1.1
107,394	-		IAI47_00470	0.69	-1.0
107,394	-		IAI47_00470	0.69	+0.0
107,394	-		IAI47_00470	0.69	+0.8
107,394	-		IAI47_00470	0.69	+0.4
107,394	-		IAI47_00470	0.69	-0.0
107,394	-		IAI47_00470	0.69	+1.9
107,394	-		IAI47_00470	0.69	+1.1
107,394	-		IAI47_00470	0.69	+1.1
107,394	-		IAI47_00470	0.69	+1.0
107,397	+		IAI47_00470	0.69	-0.3
107,397	+		IAI47_00470	0.69	-1.1
107,397	+		IAI47_00470	0.69	-1.8
107,397	+		IAI47_00470	0.69	+0.2
107,397	+		IAI47_00470	0.69	+0.2
107,397	+		IAI47_00470	0.69	-0.5
107,397	+		IAI47_00470	0.69	-0.8
107,397	+		IAI47_00470	0.69	+0.1
107,398	-		IAI47_00470	0.69	-0.8
107,398	-		IAI47_00470	0.69	-0.4
107,398	-		IAI47_00470	0.69	-1.0
107,398	-		IAI47_00470	0.69	-1.5
107,398	-		IAI47_00470	0.69	-2.4
107,398	-		IAI47_00470	0.69	+0.4
107,398	-		IAI47_00470	0.69	+0.1
107,398	-		IAI47_00470	0.69	-2.9
107,422	+		IAI47_00470	0.73	+0.4
107,481	+		IAI47_00470	0.83	+0.0
107,481	+		IAI47_00470	0.83	-2.0
107,481	+		IAI47_00470	0.83	-0.7
107,482	-		IAI47_00470	0.83	-1.1
107,482	-		IAI47_00470	0.83	-2.0
107,528	+				-0.5
107,528	+				-0.6
107,529	-				-0.3
107,529	-				+1.7
107,535	+				-0.0
107,544	+				+1.5
107,545	-				-1.3
107,545	-				-0.5
107,573	+				+2.0
107,573	+				-1.0
107,573	+				+0.0
107,573	+				-0.3
107,574	-				-2.3
107,574	-				+1.1
107,578	+				-1.5
107,578	+				-0.9
107,578	+				-0.5
107,578	+				-2.2
107,578	+				-0.1
107,578	+				+0.0
107,578	+				-1.0
107,579	-				-1.3
107,579	-				-1.1
107,579	-				-0.7
107,579	-				-0.9
107,579	-				-2.4
107,642	+				+0.0
107,686	-		IAI47_00475	0.12	+0.6
107,695	+		IAI47_00475	0.13	+1.9
107,695	+		IAI47_00475	0.13	-0.2
107,695	+		IAI47_00475	0.13	+0.9
107,695	+		IAI47_00475	0.13	-0.6
107,695	+		IAI47_00475	0.13	-0.3
107,695	+		IAI47_00475	0.13	-2.2
107,695	+		IAI47_00475	0.13	-0.5
107,695	+		IAI47_00475	0.13	+0.1
107,696	-		IAI47_00475	0.13	-0.8
107,696	-		IAI47_00475	0.13	-0.9
107,696	-		IAI47_00475	0.13	-2.3
107,696	-		IAI47_00475	0.13	-0.2
107,696	-		IAI47_00475	0.13	-0.7
107,696	-		IAI47_00475	0.13	-1.8
107,696	-		IAI47_00475	0.13	-1.0
107,696	-		IAI47_00475	0.13	-0.4
107,696	-		IAI47_00475	0.13	-0.3
107,696	-		IAI47_00475	0.13	-0.6
107,696	-		IAI47_00475	0.13	-0.8
107,696	-		IAI47_00475	0.13	-0.4
107,724	+		IAI47_00475	0.16	+1.1
107,725	-		IAI47_00475	0.16	-2.0
107,725	-		IAI47_00475	0.16	+1.0
107,787	-		IAI47_00475	0.23	+0.1
107,826	+		IAI47_00475	0.28	-2.1
107,826	+		IAI47_00475	0.28	-1.6
107,826	+		IAI47_00475	0.28	-0.3
107,827	-		IAI47_00475	0.28	-0.0
107,827	-		IAI47_00475	0.28	-1.6
107,827	-		IAI47_00475	0.28	-0.3
107,842	+		IAI47_00475	0.30	+0.4
107,842	+		IAI47_00475	0.30	-1.0
107,842	+		IAI47_00475	0.30	-0.7
107,842	+		IAI47_00475	0.30	-1.2
107,862	+		IAI47_00475	0.32	-2.8
107,863	-		IAI47_00475	0.32	-2.5
107,867	+		IAI47_00475	0.32	+0.2
107,867	+		IAI47_00475	0.32	-1.6
107,867	+		IAI47_00475	0.32	-1.4
107,867	+		IAI47_00475	0.32	-0.6
107,868	-		IAI47_00475	0.33	-1.1
107,868	-		IAI47_00475	0.33	+0.2
107,901	+		IAI47_00475	0.36	-1.0
107,902	-		IAI47_00475	0.36	-0.4
107,902	-		IAI47_00475	0.36	-0.9
107,915	+		IAI47_00475	0.38	+0.2
107,915	+		IAI47_00475	0.38	-0.5
107,916	-		IAI47_00475	0.38	-1.3
107,916	-		IAI47_00475	0.38	-2.6
107,987	-		IAI47_00475	0.46	+0.6
107,987	-		IAI47_00475	0.46	-0.5
107,987	-		IAI47_00475	0.46	-0.4
108,001	+		IAI47_00475	0.48	-1.1
108,001	+		IAI47_00475	0.48	+1.0
108,001	+		IAI47_00475	0.48	+0.1
108,061	+		IAI47_00475	0.55	-1.5
108,061	+		IAI47_00475	0.55	+0.6
108,061	+		IAI47_00475	0.55	-0.1
108,062	-		IAI47_00475	0.55	-0.0
108,062	-		IAI47_00475	0.55	-0.5
108,062	-		IAI47_00475	0.55	-1.1
108,084	+		IAI47_00475	0.57	-0.8
108,084	+		IAI47_00475	0.57	-3.0
108,084	+		IAI47_00475	0.57	-1.2
108,084	+		IAI47_00475	0.57	-0.3
108,085	-		IAI47_00475	0.57	+0.5
108,085	-		IAI47_00475	0.57	+1.3
108,085	-		IAI47_00475	0.57	-0.9
108,169	+		IAI47_00475	0.67	+0.8
108,169	+		IAI47_00475	0.67	+0.3
108,169	+		IAI47_00475	0.67	-0.6
108,170	-		IAI47_00475	0.67	-1.4
108,170	-		IAI47_00475	0.67	-2.5
108,170	-		IAI47_00475	0.67	-0.8
108,271	+		IAI47_00475	0.79	-0.1
108,271	+		IAI47_00475	0.79	+0.3
108,271	+		IAI47_00475	0.79	-0.2
108,271	+		IAI47_00475	0.79	-0.5
108,271	+		IAI47_00475	0.79	-0.8
108,271	+		IAI47_00475	0.79	-0.7
108,271	+		IAI47_00475	0.79	-1.1
108,271	+		IAI47_00475	0.79	-0.6
108,272	-		IAI47_00475	0.79	-0.5
108,272	-		IAI47_00475	0.79	-0.3
108,272	-		IAI47_00475	0.79	-1.9
108,272	-		IAI47_00475	0.79	-1.7
108,276	+		IAI47_00475	0.79	-0.2
108,276	+		IAI47_00475	0.79	-0.8
108,276	+		IAI47_00475	0.79	+0.6
108,276	+		IAI47_00475	0.79	-1.0
108,276	+		IAI47_00475	0.79	-0.9
108,276	+		IAI47_00475	0.79	-0.8
108,276	+		IAI47_00475	0.79	-0.8
108,276	+		IAI47_00475	0.79	-0.5
108,276	+		IAI47_00475	0.79	-1.3
108,276	+		IAI47_00475	0.79	-0.1
108,277	-		IAI47_00475	0.79	-1.2
108,277	-		IAI47_00475	0.79	+2.7
108,277	-		IAI47_00475	0.79	-1.0
108,277	-		IAI47_00475	0.79	-0.5
108,277	-		IAI47_00475	0.79	-1.0
108,277	-		IAI47_00475	0.79	+0.7
108,277	-		IAI47_00475	0.79	-1.8
108,277	-		IAI47_00475	0.79	-1.5
108,279	+		IAI47_00475	0.80	-0.1
108,279	+		IAI47_00475	0.80	-1.4
108,279	+		IAI47_00475	0.80	-0.7
108,279	+		IAI47_00475	0.80	-1.5
108,279	+		IAI47_00475	0.80	-1.0
108,279	+		IAI47_00475	0.80	+0.1
108,279	+		IAI47_00475	0.80	-0.6
108,279	+		IAI47_00475	0.80	+1.4
108,279	+		IAI47_00475	0.80	+1.8
108,279	+		IAI47_00475	0.80	-0.8
108,279	+		IAI47_00475	0.80	-2.6
108,279	+		IAI47_00475	0.80	-0.2
108,279	+		IAI47_00475	0.80	-0.6
108,280	-		IAI47_00475	0.80	+0.1
108,280	-		IAI47_00475	0.80	-0.2
108,280	-		IAI47_00475	0.80	+1.7
108,280	-		IAI47_00475	0.80	-2.9
108,280	-		IAI47_00475	0.80	-2.0
108,280	-		IAI47_00475	0.80	-0.2
108,280	-		IAI47_00475	0.80	-2.5
108,280	-		IAI47_00475	0.80	-0.7
108,280	-		IAI47_00475	0.80	-2.2
108,280	-		IAI47_00475	0.80	-1.1
108,280	-		IAI47_00475	0.80	-0.1
108,280	-		IAI47_00475	0.80	-0.8
108,280	-		IAI47_00475	0.80	-0.5
108,280	-		IAI47_00475	0.80	+0.5
108,280	-		IAI47_00475	0.80	-0.4
108,280	-		IAI47_00475	0.80	-0.4
108,280	-		IAI47_00475	0.80	+0.1
108,292	+		IAI47_00475	0.81	+0.1
108,292	+		IAI47_00475	0.81	-1.1
108,292	+		IAI47_00475	0.81	-1.7
108,293	-		IAI47_00475	0.81	-1.1
108,293	-		IAI47_00475	0.81	+1.9
108,293	-		IAI47_00475	0.81	-2.0
108,293	-		IAI47_00475	0.81	-1.3
108,304	+		IAI47_00475	0.82	+0.8
108,304	+		IAI47_00475	0.82	+2.4
108,305	-		IAI47_00475	0.83	-0.6
108,305	-		IAI47_00475	0.83	-0.1
108,305	-		IAI47_00475	0.83	-0.4
108,305	-		IAI47_00475	0.83	+0.1
108,312	-		IAI47_00475	0.83	-0.2
108,346	+		IAI47_00475	0.87	-0.8
108,347	-		IAI47_00475	0.87	+0.3
108,360	+		IAI47_00475	0.89	+0.2
108,360	+		IAI47_00475	0.89	+0.3
108,360	+		IAI47_00475	0.89	+0.1
108,360	+		IAI47_00475	0.89	+2.7
108,360	+		IAI47_00475	0.89	+1.2
108,360	+		IAI47_00475	0.89	-0.1
108,360	+		IAI47_00475	0.89	+1.0
108,360	+		IAI47_00475	0.89	+0.7
108,360	+		IAI47_00475	0.89	-0.3
108,361	-		IAI47_00475	0.89	-0.8
108,361	-		IAI47_00475	0.89	-1.5
108,361	-		IAI47_00475	0.89	-0.1
108,361	-		IAI47_00475	0.89	-0.2
108,383	+				-0.1
108,384	-				+1.3
108,384	-				-0.5
108,384	-				-0.4
108,384	-				-2.6
108,532	+		IAI47_00480	0.18	-0.5
108,533	-		IAI47_00480	0.18	-2.6
108,550	+		IAI47_00480	0.22	+1.2
108,598	+		IAI47_00480	0.33	-0.5
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