Strain Fitness in Pantoea sp. MT58 around IAI47_00140

Experiment: Survival; Treatment=FW300 (pH7.4) with 5.0 mM Glucose; TreatmentDuration=24hrs; Outgrowth=LBkan50

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Survival; Treatment=FW300 (pH7.4) with 5.0 mM Glucose; TreatmentDuration=24hrs; Outgrowth=LBkan50
29,038	+		IAI47_00135	0.27	+1.3
29,039	-		IAI47_00135	0.27	-2.3
29,088	+		IAI47_00135	0.32	-0.5
29,089	-		IAI47_00135	0.32	+0.8
29,127	+		IAI47_00135	0.36	+0.3
29,127	+		IAI47_00135	0.36	+0.2
29,127	+		IAI47_00135	0.36	-1.4
29,128	-		IAI47_00135	0.36	-1.6
29,128	-		IAI47_00135	0.36	+0.1
29,157	+		IAI47_00135	0.39	-0.2
29,157	+		IAI47_00135	0.39	-0.2
29,158	-		IAI47_00135	0.39	+0.7
29,158	-		IAI47_00135	0.39	-0.1
29,214	-		IAI47_00135	0.45	-1.4
29,214	-		IAI47_00135	0.45	+1.2
29,292	+		IAI47_00135	0.53	-3.1
29,292	+		IAI47_00135	0.53	+1.7
29,292	+		IAI47_00135	0.53	+1.1
29,292	+		IAI47_00135	0.53	-0.8
29,292	+		IAI47_00135	0.53	+1.0
29,292	+		IAI47_00135	0.53	+1.9
29,292	+		IAI47_00135	0.53	-0.4
29,292	+		IAI47_00135	0.53	-1.8
29,292	+		IAI47_00135	0.53	+2.7
29,292	+		IAI47_00135	0.53	+0.9
29,292	+		IAI47_00135	0.53	+0.5
29,293	-		IAI47_00135	0.53	+1.1
29,293	-		IAI47_00135	0.53	+0.8
29,293	-		IAI47_00135	0.53	-0.4
29,293	-		IAI47_00135	0.53	-0.1
29,293	-		IAI47_00135	0.53	+0.1
29,293	-		IAI47_00135	0.53	-0.5
29,293	-		IAI47_00135	0.53	-0.6
29,339	-		IAI47_00135	0.58	-0.8
29,377	+		IAI47_00135	0.62	+1.4
29,377	+		IAI47_00135	0.62	+0.2
29,377	+		IAI47_00135	0.62	-1.2
29,378	-		IAI47_00135	0.62	+0.0
29,452	+		IAI47_00135	0.69	-0.3
29,452	+		IAI47_00135	0.69	+0.3
29,453	-		IAI47_00135	0.69	+1.9
29,463	-		IAI47_00135	0.70	-0.2
29,473	+		IAI47_00135	0.71	+0.9
29,473	+		IAI47_00135	0.71	+1.3
29,473	+		IAI47_00135	0.71	+1.2
29,473	+		IAI47_00135	0.71	-0.8
29,474	-		IAI47_00135	0.72	-0.1
29,559	+		IAI47_00135	0.80	-0.1
29,563	+		IAI47_00135	0.81	-1.1
29,563	+		IAI47_00135	0.81	+0.5
29,563	+		IAI47_00135	0.81	+3.3
29,563	+		IAI47_00135	0.81	-1.0
29,563	+		IAI47_00135	0.81	-0.3
29,563	+		IAI47_00135	0.81	+1.4
29,563	+		IAI47_00135	0.81	-1.0
29,563	+		IAI47_00135	0.81	-1.2
29,563	+		IAI47_00135	0.81	+1.1
29,563	+		IAI47_00135	0.81	-0.8
29,563	+		IAI47_00135	0.81	-0.5
29,563	+		IAI47_00135	0.81	-3.1
29,563	+		IAI47_00135	0.81	-2.2
29,564	-		IAI47_00135	0.81	+1.1
29,564	-		IAI47_00135	0.81	+1.1
29,564	-		IAI47_00135	0.81	-0.0
29,564	-		IAI47_00135	0.81	-0.2
29,564	-		IAI47_00135	0.81	-1.1
29,564	-		IAI47_00135	0.81	+1.0
29,564	-		IAI47_00135	0.81	+0.0
29,564	-		IAI47_00135	0.81	+0.5
29,656	+				+0.0
29,656	+				-1.9
29,657	-				+0.3
29,683	-				-0.6
29,690	-				+0.2
29,723	+				+1.1
29,732	-				+2.3
29,743	+				+1.3
29,743	+				-1.3
29,743	+				+1.2
29,744	-				+2.3
29,744	-				-0.0
29,744	-				+0.5
29,744	-				+0.2
29,744	-				+1.6
29,760	+				-1.3
29,760	+				+0.5
29,760	+				+0.3
29,761	-				-0.5
29,792	+				+0.9
29,792	+				+1.1
29,792	+				+1.2
29,792	+				+0.9
29,792	+				+1.2
29,810	+				+1.0
29,811	-				+2.5
29,825	+				-0.0
29,826	-				-0.5
29,851	-				+0.7
29,890	+				-0.5
29,893	+				-1.7
29,893	+				-0.6
29,893	+				+0.5
29,893	+				-1.8
29,893	+				-0.2
29,894	-				-1.2
29,894	-				+0.3
29,894	-				-1.9
29,894	-				+0.8
29,894	-				-0.1
29,894	-				-2.2
29,894	-				+0.8
29,990	+		IAI47_00140	0.15	-2.2
29,990	+		IAI47_00140	0.15	-2.0
30,100	+		IAI47_00140	0.32	+0.7
30,101	-		IAI47_00140	0.32	+0.1
30,105	+		IAI47_00140	0.32	-0.4
30,105	+		IAI47_00140	0.32	-2.2
30,106	-		IAI47_00140	0.32	+0.4
30,106	-		IAI47_00140	0.32	+1.7
30,106	-		IAI47_00140	0.32	+2.0
30,164	+		IAI47_00140	0.41	+1.2
30,194	+		IAI47_00140	0.46	-0.7
30,194	+		IAI47_00140	0.46	-1.2
30,194	+		IAI47_00140	0.46	+1.6
30,194	+		IAI47_00140	0.46	+0.4
30,195	-		IAI47_00140	0.46	+0.3
30,195	-		IAI47_00140	0.46	+1.7
30,197	+		IAI47_00140	0.46	-0.7
30,198	-		IAI47_00140	0.46	-0.6
30,198	-		IAI47_00140	0.46	+1.2
30,198	-		IAI47_00140	0.46	-0.1
30,215	+		IAI47_00140	0.49	+1.1
30,215	+		IAI47_00140	0.49	-1.3
30,215	+		IAI47_00140	0.49	-0.3
30,216	-		IAI47_00140	0.49	-0.4
30,216	-		IAI47_00140	0.49	+2.3
30,216	-		IAI47_00140	0.49	-1.8
30,216	-		IAI47_00140	0.49	+0.3
30,216	-		IAI47_00140	0.49	+0.1
30,216	-		IAI47_00140	0.49	+1.2
30,216	-		IAI47_00140	0.49	+0.2
30,216	-		IAI47_00140	0.49	-0.5
30,225	-		IAI47_00140	0.50	+1.9
30,239	+		IAI47_00140	0.53	-0.4
30,249	-		IAI47_00140	0.54	-1.5
30,249	-		IAI47_00140	0.54	-0.4
30,249	-		IAI47_00140	0.54	-0.2
30,249	-		IAI47_00140	0.54	-0.5
30,303	+		IAI47_00140	0.62	-0.5
30,303	+		IAI47_00140	0.62	-1.2
30,303	+		IAI47_00140	0.62	-0.9
30,304	-		IAI47_00140	0.62	+3.2
30,304	-		IAI47_00140	0.62	-0.8
30,304	-		IAI47_00140	0.62	+0.8
30,304	-		IAI47_00140	0.62	+0.4
30,304	-		IAI47_00140	0.62	-0.1
30,304	-		IAI47_00140	0.62	-0.8
30,304	-		IAI47_00140	0.62	+1.8
30,304	-		IAI47_00140	0.62	+1.0
30,304	-		IAI47_00140	0.62	+2.5
30,304	-		IAI47_00140	0.62	-1.6
30,304	-		IAI47_00140	0.62	+0.3
30,313	+		IAI47_00140	0.64	-1.6
30,313	+		IAI47_00140	0.64	-2.0
30,313	+		IAI47_00140	0.64	+0.2
30,313	+		IAI47_00140	0.64	+0.5
30,313	+		IAI47_00140	0.64	-1.3
30,313	+		IAI47_00140	0.64	-0.4
30,314	-		IAI47_00140	0.64	+0.5
30,314	-		IAI47_00140	0.64	-1.8
30,314	-		IAI47_00140	0.64	-1.0
30,314	-		IAI47_00140	0.64	-0.0
30,314	-		IAI47_00140	0.64	-0.2
30,314	-		IAI47_00140	0.64	+2.9
30,314	-		IAI47_00140	0.64	+0.9
30,314	-		IAI47_00140	0.64	+1.5
30,314	-		IAI47_00140	0.64	-0.9
30,314	-		IAI47_00140	0.64	+1.8
30,314	-		IAI47_00140	0.64	-1.0
30,314	-		IAI47_00140	0.64	-1.3
30,314	-		IAI47_00140	0.64	-0.4
30,314	-		IAI47_00140	0.64	+1.8
30,316	+		IAI47_00140	0.64	-1.6
30,316	+		IAI47_00140	0.64	+0.4
30,316	+		IAI47_00140	0.64	+1.5
30,371	+		IAI47_00140	0.73	-0.6
30,371	+		IAI47_00140	0.73	-0.5
30,371	+		IAI47_00140	0.73	+0.7
30,371	+		IAI47_00140	0.73	+3.3
30,475	+		IAI47_00140	0.88	+0.9
30,475	+		IAI47_00140	0.88	-1.1
30,475	+		IAI47_00140	0.88	-0.2
30,475	+		IAI47_00140	0.88	+0.9
30,475	+		IAI47_00140	0.88	+0.4
30,476	-		IAI47_00140	0.88	-0.0
30,488	+				-0.7
30,488	+				+0.2
30,488	+				-0.4
30,489	-				-2.2
30,489	-				+4.2
30,516	+				+0.3
30,516	+				-1.1
30,516	+				+2.7
30,517	-				-1.9
30,517	-				-1.1
30,519	+				-0.8
30,519	+				+0.4
30,520	-				+1.9
30,520	-				+0.0
30,520	-				-0.5
30,520	-				+2.5
30,563	+				-1.0
30,563	+				+0.9
30,563	+				+0.0
30,563	+				+0.8
30,563	+				-1.2
30,563	+				+1.0
30,564	-				+2.4
30,564	-				+0.0
30,564	-				+0.2
30,596	-				+0.6
30,608	+				+0.1
30,608	+				+0.6
30,609	-				+0.0
30,609	-				+1.9
30,632	+				+0.1
30,632	+				+0.6
30,632	+				+0.5
30,632	+				-2.0
30,633	-				+0.8
30,653	+				-0.9
30,713	+				+0.3
30,714	-				-0.8
30,714	-				-0.6
30,714	-				-0.8
30,714	-				+1.1
30,714	-				-2.1
30,714	-				-0.8
30,714	-				-2.1
30,714	-				-0.4
30,733	+		IAI47_00145	0.13	-0.2
30,733	+		IAI47_00145	0.13	-0.4
30,733	+		IAI47_00145	0.13	+0.5
30,733	+		IAI47_00145	0.13	-0.4
30,733	+		IAI47_00145	0.13	-0.0
30,733	+		IAI47_00145	0.13	-1.1
30,734	-		IAI47_00145	0.13	-0.8
30,734	-		IAI47_00145	0.13	-1.2
30,734	-		IAI47_00145	0.13	-0.6
30,742	-		IAI47_00145	0.14	+0.2
30,790	+		IAI47_00145	0.23	-1.0
30,791	-		IAI47_00145	0.23	-0.7
30,791	-		IAI47_00145	0.23	+1.1
30,834	+		IAI47_00145	0.30	-0.2
30,834	+		IAI47_00145	0.30	-2.2
30,835	-		IAI47_00145	0.31	-0.5
30,835	-		IAI47_00145	0.31	-2.1
30,924	+		IAI47_00145	0.46	+0.3
30,924	+		IAI47_00145	0.46	+3.9
30,924	+		IAI47_00145	0.46	+0.2
30,925	-		IAI47_00145	0.46	-2.6
30,925	-		IAI47_00145	0.46	+0.2
30,925	-		IAI47_00145	0.46	-0.3
30,925	-		IAI47_00145	0.46	-0.0
30,937	+		IAI47_00145	0.49	-0.7
30,958	+		IAI47_00145	0.52	-0.7
30,958	+		IAI47_00145	0.52	-0.2
30,974	-		IAI47_00145	0.55	+0.6
31,003	+		IAI47_00145	0.60	-2.9
31,003	+		IAI47_00145	0.60	+0.7
31,003	+		IAI47_00145	0.60	+0.0
31,004	-		IAI47_00145	0.60	+1.0
31,004	-		IAI47_00145	0.60	-0.4
31,004	-		IAI47_00145	0.60	+0.4
31,004	-		IAI47_00145	0.60	+0.8
31,006	-		IAI47_00145	0.61	-2.1
31,025	+		IAI47_00145	0.64	-0.7
31,025	+		IAI47_00145	0.64	+1.1
31,025	+		IAI47_00145	0.64	-1.6
31,025	+		IAI47_00145	0.64	-1.5
31,025	+		IAI47_00145	0.64	+1.1
31,026	-		IAI47_00145	0.64	-0.8
31,026	-		IAI47_00145	0.64	-2.2
31,062	+		IAI47_00145	0.71	+1.3
31,063	-		IAI47_00145	0.71	-1.6
31,063	-		IAI47_00145	0.71	+0.8
31,097	+		IAI47_00145	0.77	+0.8
31,097	+		IAI47_00145	0.77	-0.6
31,183	-				-0.4
31,183	-				-0.4
31,191	+				-0.6
31,191	+				-1.3
31,191	+				-0.9
31,191	+				-0.6
31,191	+				+0.4
31,191	+				-1.1
31,191	+				-3.3
31,191	+				-0.5
31,192	-				-0.1
31,192	-				-0.8
31,192	-				+1.4
31,192	-				-0.3
31,192	-				-1.1
31,192	-				-1.4
31,243	-				+0.2
31,285	-				-0.3
31,294	+				+0.1
31,295	-				-0.1
31,295	-				-0.2
31,295	-				-1.1
31,295	-				+0.1
31,295	-				+3.0
31,295	-				-0.3
31,295	-				+0.4
31,295	-				-1.5
31,295	-				+1.7
31,295	-				-0.4
31,295	-				-2.5
31,298	+				+2.7
31,298	+				-1.3
31,298	+				-0.4
31,299	-				-1.3
31,299	-				+0.5
31,299	-				+0.4
31,299	-				-0.5
31,299	-				-0.5
31,313	+				+1.9
31,314	-				-1.5
31,317	+				+1.1
31,318	-				-0.6
31,343	+				-1.2
31,343	+				+1.1
31,343	+				-0.3
31,343	+				-0.8
31,343	+				+0.5
31,344	-				+1.1
31,356	-				-0.3
31,358	+				-2.9
31,358	+				+2.5
31,358	+				+0.2
31,358	+				-3.0
31,358	+				+0.3
31,359	-				+2.1
31,359	-				+1.6
31,430	+				+1.3
31,430	+				-0.5
31,430	+				+0.0
31,430	+				-0.8
31,430	+				+0.3
31,430	+				+0.5
31,430	+				+2.1
31,430	+				-0.7
31,430	+				+1.7
31,431	-				-2.6
31,431	-				+1.2
31,431	-				-0.3
31,431	-				+0.2
31,431	-				-1.4
31,431	-				-0.4
31,431	-				+1.3
31,431	-				-0.8
31,439	+				+0.4
31,510	+		IAI47_00150	0.18	+0.8
31,511	-		IAI47_00150	0.18	-1.4