Strain Fitness in Caulobacter crescentus NA1000 around CCNA_03847

Experiment: PYE_noCalcium 30C survival rep2 28 days

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	PYE_noCalcium 30C survival rep2 28 days
4,012,125	-				-1.5
4,012,141	+		CCNA_03845	0.57	-2.3
4,012,141	+		CCNA_03845	0.57	-0.4
4,012,146	-		CCNA_03845	0.58	-0.6
4,012,149	-		CCNA_03845	0.58	-0.0
4,012,174	+		CCNA_03845	0.61	-0.4
4,012,183	-		CCNA_03845	0.62	+1.4
4,012,208	+		CCNA_03845	0.65	+1.1
4,012,215	+		CCNA_03845	0.66	-1.5
4,012,248	-		CCNA_03845	0.69	-0.2
4,012,248	-		CCNA_03845	0.69	-1.3
4,012,367	+		CCNA_03845	0.82	-3.1
4,012,367	+		CCNA_03845	0.82	-1.1
4,012,367	+		CCNA_03845	0.82	+0.4
4,012,367	+		CCNA_03845	0.82	+0.0
4,012,370	-		CCNA_03845	0.83	-4.0
4,012,375	-		CCNA_03845	0.83	+2.3
4,012,375	-		CCNA_03845	0.83	+0.0
4,012,476	+				-2.1
4,012,476	+				-0.8
4,012,484	-				+1.0
4,012,506	-				-0.6
4,012,529	-				-0.2
4,012,534	+				-1.0
4,012,535	-				+0.2
4,012,548	-				-1.3
4,012,648	-		CCNA_03846	0.16	-2.5
4,012,662	-		CCNA_03846	0.19	-0.1
4,012,673	-		CCNA_03846	0.21	-2.0
4,012,695	+		CCNA_03846	0.26	-1.2
4,012,705	-		CCNA_03846	0.28	-0.9
4,012,705	-		CCNA_03846	0.28	-0.5
4,012,711	-		CCNA_03846	0.29	-1.5
4,012,729	-		CCNA_03846	0.33	-1.6
4,012,755	+		CCNA_03846	0.38	-0.2
4,012,763	-		CCNA_03846	0.40	-1.3
4,012,784	-		CCNA_03846	0.44	+2.6
4,012,820	+		CCNA_03846	0.52	-1.0
4,012,830	+		CCNA_03846	0.54	-2.1
4,012,843	-		CCNA_03846	0.57	-2.3
4,012,864	+		CCNA_03846	0.61	-1.2
4,012,872	-		CCNA_03846	0.63	-1.9
4,012,986	+		CCNA_03846	0.87	-1.1
4,012,986	+		CCNA_03846	0.87	+2.6
4,012,986	+		CCNA_03846	0.87	-0.7
4,012,994	-		CCNA_03846	0.88	-1.8
4,013,007	+				+0.3
4,013,027	-				-1.7
4,013,038	+				-0.5
4,013,038	+				-2.8
4,013,074	+				+1.0
4,013,082	-				+1.8
4,013,087	+				-2.0
4,013,097	+				-1.1
4,013,097	-				-3.4
4,013,101	+				+0.9
4,013,108	+				+1.0
4,013,146	+				-2.2
4,013,178	-				+0.1
4,013,215	+		CCNA_03847	0.14	+2.6
4,013,215	+		CCNA_03847	0.14	-0.7
4,013,220	+		CCNA_03847	0.15	+2.0
4,013,223	-		CCNA_03847	0.15	-0.4
4,013,234	+		CCNA_03847	0.17	-0.5
4,013,242	-		CCNA_03847	0.18	+1.4
4,013,270	+		CCNA_03847	0.22	-0.1
4,013,278	-		CCNA_03847	0.23	-0.8
4,013,284	+		CCNA_03847	0.24	-0.7
4,013,284	+		CCNA_03847	0.24	+0.4
4,013,292	-		CCNA_03847	0.25	-0.4
4,013,294	+		CCNA_03847	0.25	+0.5
4,013,294	+		CCNA_03847	0.25	+1.7
4,013,302	-		CCNA_03847	0.26	-0.8
4,013,316	+		CCNA_03847	0.28	+1.1
4,013,324	-		CCNA_03847	0.29	+0.0
4,013,339	+		CCNA_03847	0.31	-2.3
4,013,360	+		CCNA_03847	0.34	-0.4
4,013,360	+		CCNA_03847	0.34	-1.0
4,013,368	-		CCNA_03847	0.35	+2.1
4,013,370	+		CCNA_03847	0.36	-2.3
4,013,377	+		CCNA_03847	0.37	+1.7
4,013,409	+		CCNA_03847	0.41	-1.8
4,013,409	-		CCNA_03847	0.41	-0.5
4,013,415	+		CCNA_03847	0.42	+0.0
4,013,449	-		CCNA_03847	0.46	-0.1
4,013,503	-		CCNA_03847	0.54	-0.8
4,013,515	-		CCNA_03847	0.56	-0.7
4,013,526	+		CCNA_03847	0.57	-0.7
4,013,528	+		CCNA_03847	0.57	-1.5
4,013,528	+		CCNA_03847	0.57	-1.8
4,013,534	-		CCNA_03847	0.58	+2.9
4,013,536	-		CCNA_03847	0.58	-1.1
4,013,536	-		CCNA_03847	0.58	-1.5
4,013,550	+		CCNA_03847	0.60	+2.1
4,013,572	+		CCNA_03847	0.63	+2.5
4,013,579	-		CCNA_03847	0.64	-0.4
4,013,607	+		CCNA_03847	0.68	-0.6
4,013,621	+		CCNA_03847	0.70	+1.2
4,013,646	-		CCNA_03847	0.74	+0.6
4,013,646	-		CCNA_03847	0.74	-0.3
4,013,656	+		CCNA_03847	0.75	-2.8
4,013,662	+		CCNA_03847	0.76	+0.1
4,013,679	-		CCNA_03847	0.78	-0.2
4,013,690	-		CCNA_03847	0.80	+0.3
4,013,734	-		CCNA_03847	0.86	+0.6
4,013,734	-		CCNA_03847	0.86	+1.5
4,013,734	-		CCNA_03847	0.86	-2.0
4,013,746	+		CCNA_03847	0.87	-1.5
4,013,753	+		CCNA_03847	0.88	-1.6
4,013,754	-		CCNA_03847	0.88	+0.4
4,013,822	+				-0.7
4,013,822	+				+0.4
4,013,877	+				-0.2
4,013,888	+				+1.7
4,014,003	+				+1.6
4,014,007	+				-2.7
4,014,013	-				-1.3
4,014,014	+				+0.8
4,014,014	+				-0.5
4,014,015	-				+1.8
4,014,069	-		CCNA_03848	0.12	-0.6
4,014,069	-		CCNA_03848	0.12	+1.2
4,014,086	+		CCNA_03848	0.14	-1.7
4,014,089	-		CCNA_03848	0.15	-0.0
4,014,101	+		CCNA_03848	0.16	+3.9
4,014,107	+		CCNA_03848	0.17	-1.8
4,014,107	+		CCNA_03848	0.17	+0.0
4,014,107	+		CCNA_03848	0.17	+2.0
4,014,107	+		CCNA_03848	0.17	-0.1
4,014,107	+		CCNA_03848	0.17	+0.3
4,014,107	+		CCNA_03848	0.17	+0.2
4,014,107	+		CCNA_03848	0.17	-0.6
4,014,107	+		CCNA_03848	0.17	+0.1
4,014,107	+		CCNA_03848	0.17	-2.3
4,014,107	+		CCNA_03848	0.17	-3.4
4,014,107	+		CCNA_03848	0.17	+0.0
4,014,107	+		CCNA_03848	0.17	+1.3
4,014,107	+		CCNA_03848	0.17	-2.4
4,014,107	+		CCNA_03848	0.17	+0.9
4,014,107	+		CCNA_03848	0.17	-0.8
4,014,107	+		CCNA_03848	0.17	-0.4
4,014,107	+		CCNA_03848	0.17	-1.2
4,014,115	-		CCNA_03848	0.18	-0.3
4,014,115	-		CCNA_03848	0.18	+1.0
4,014,115	-		CCNA_03848	0.18	-0.4
4,014,115	-		CCNA_03848	0.18	+0.0
4,014,115	-		CCNA_03848	0.18	+0.3
4,014,115	-		CCNA_03848	0.18	-0.4
4,014,115	-		CCNA_03848	0.18	-0.9
4,014,115	-		CCNA_03848	0.18	-1.1
4,014,115	-		CCNA_03848	0.18	+0.2
4,014,115	-		CCNA_03848	0.18	+0.7
4,014,115	-		CCNA_03848	0.18	+0.9
4,014,115	-		CCNA_03848	0.18	-0.2
4,014,115	-		CCNA_03848	0.18	-1.4
4,014,115	-		CCNA_03848	0.18	-0.6
4,014,115	-		CCNA_03848	0.18	-0.2
4,014,115	-		CCNA_03848	0.18	-0.1
4,014,115	-		CCNA_03848	0.18	-0.2
4,014,115	-		CCNA_03848	0.18	-1.7
4,014,115	-		CCNA_03848	0.18	-0.4
4,014,115	-		CCNA_03848	0.18	-0.9
4,014,115	-		CCNA_03848	0.18	-1.7
4,014,115	-		CCNA_03848	0.18	+0.3
4,014,115	-		CCNA_03848	0.18	+0.4
4,014,115	-		CCNA_03848	0.18	+0.3
4,014,133	+		CCNA_03848	0.20	-1.8
4,014,155	+		CCNA_03848	0.22	-3.1
4,014,162	-		CCNA_03848	0.23	-0.4
4,014,231	+		CCNA_03848	0.31	-1.1
4,014,312	+		CCNA_03848	0.41	+1.0
4,014,312	+		CCNA_03848	0.41	-1.3
4,014,315	-		CCNA_03848	0.41	+2.0
4,014,317	+		CCNA_03848	0.41	-1.2
4,014,323	+		CCNA_03848	0.42	-2.2
4,014,323	+		CCNA_03848	0.42	-1.5
4,014,398	-		CCNA_03848	0.51	+1.6
4,014,410	-		CCNA_03848	0.52	+4.1
4,014,416	+		CCNA_03848	0.53	+0.5
4,014,441	-		CCNA_03848	0.56	-1.4
4,014,485	-		CCNA_03848	0.61	-0.1
4,014,523	+		CCNA_03848	0.65	-3.5
4,014,523	+		CCNA_03848	0.65	-0.4
4,014,531	-		CCNA_03848	0.66	-0.4
4,014,545	+		CCNA_03848	0.68	-2.0
4,014,592	-		CCNA_03848	0.73	+1.5
4,014,594	+		CCNA_03848	0.74	-1.0
4,014,602	-		CCNA_03848	0.74	+2.5
4,014,636	+		CCNA_03848	0.78	-3.6
4,014,641	+		CCNA_03848	0.79	+2.6
4,014,643	-		CCNA_03848	0.79	-0.6
4,014,644	-		CCNA_03848	0.79	-0.4
4,014,644	-		CCNA_03848	0.79	-0.2
4,014,670	+		CCNA_03848	0.82	-3.2
4,014,673	-		CCNA_03848	0.83	-0.5
4,014,684	+		CCNA_03848	0.84	-0.9
4,014,684	+		CCNA_03848	0.84	+2.6
4,014,698	-		CCNA_03848	0.86	-1.7
4,014,703	-		CCNA_03848	0.86	-0.9
4,014,705	-		CCNA_03848	0.86	-2.8
4,014,715	+		CCNA_03848	0.88	-1.3
4,014,744	+				-1.7
4,014,759	+				+0.0
4,014,759	+				-1.7
4,014,792	+				-1.4
4,014,811	-				-1.5
4,014,836	+				-0.8
4,014,836	+				-0.2
4,014,836	+				-1.5
4,014,836	+				-2.1