Strain Fitness in Caulobacter crescentus NA1000 around CCNA_03695

Experiment: PYE_noCalcium 30C survival rep2 28 days

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	PYE_noCalcium 30C survival rep2 28 days
3,860,108	-				-1.9
3,860,108	-				-3.2
3,860,118	-				-1.9
3,860,125	+				+0.8
3,860,125	+				-0.6
3,860,125	+				-0.9
3,860,125	+				+2.5
3,860,166	+		CCNA_03694	0.13	-3.0
3,860,172	+		CCNA_03694	0.14	-2.6
3,860,189	+		CCNA_03694	0.16	-0.6
3,860,197	-		CCNA_03694	0.17	-2.4
3,860,210	+		CCNA_03694	0.18	+0.3
3,860,218	-		CCNA_03694	0.19	-1.8
3,860,218	-		CCNA_03694	0.19	+0.3
3,860,218	-		CCNA_03694	0.19	-2.1
3,860,218	-		CCNA_03694	0.19	-1.4
3,860,232	+		CCNA_03694	0.20	+2.4
3,860,232	+		CCNA_03694	0.20	-1.5
3,860,250	+		CCNA_03694	0.22	+1.4
3,860,255	+		CCNA_03694	0.23	-1.9
3,860,255	+		CCNA_03694	0.23	-0.4
3,860,255	+		CCNA_03694	0.23	-1.9
3,860,255	+		CCNA_03694	0.23	-1.1
3,860,255	+		CCNA_03694	0.23	-1.5
3,860,263	-		CCNA_03694	0.24	-2.7
3,860,263	-		CCNA_03694	0.24	-1.8
3,860,263	-		CCNA_03694	0.24	-1.7
3,860,263	-		CCNA_03694	0.24	+1.6
3,860,263	-		CCNA_03694	0.24	-0.9
3,860,294	+		CCNA_03694	0.27	+1.4
3,860,308	-		CCNA_03694	0.28	+0.4
3,860,357	+		CCNA_03694	0.34	-0.9
3,860,359	-		CCNA_03694	0.34	-1.7
3,860,367	+		CCNA_03694	0.35	-1.9
3,860,367	+		CCNA_03694	0.35	+0.6
3,860,367	+		CCNA_03694	0.35	+0.1
3,860,375	-		CCNA_03694	0.35	-1.2
3,860,382	+		CCNA_03694	0.36	-0.5
3,860,382	+		CCNA_03694	0.36	-1.0
3,860,382	+		CCNA_03694	0.36	-2.6
3,860,382	+		CCNA_03694	0.36	+0.7
3,860,382	+		CCNA_03694	0.36	-1.3
3,860,385	-		CCNA_03694	0.37	+1.1
3,860,390	-		CCNA_03694	0.37	-1.5
3,860,390	-		CCNA_03694	0.37	-3.6
3,860,390	-		CCNA_03694	0.37	-2.7
3,860,390	-		CCNA_03694	0.37	-2.3
3,860,413	-		CCNA_03694	0.39	-1.0
3,860,460	+		CCNA_03694	0.44	-1.7
3,860,482	+		CCNA_03694	0.47	+0.1
3,860,482	+		CCNA_03694	0.47	+1.3
3,860,482	+		CCNA_03694	0.47	-2.3
3,860,482	+		CCNA_03694	0.47	-0.6
3,860,482	+		CCNA_03694	0.47	-1.4
3,860,482	+		CCNA_03694	0.47	-3.6
3,860,482	+		CCNA_03694	0.47	+0.6
3,860,482	+		CCNA_03694	0.47	-0.7
3,860,487	+		CCNA_03694	0.47	+0.7
3,860,487	+		CCNA_03694	0.47	+0.3
3,860,487	+		CCNA_03694	0.47	-0.6
3,860,490	-		CCNA_03694	0.48	-0.1
3,860,490	-		CCNA_03694	0.48	-2.4
3,860,490	-		CCNA_03694	0.48	-0.6
3,860,490	-		CCNA_03694	0.48	+0.2
3,860,492	+		CCNA_03694	0.48	-2.2
3,860,492	+		CCNA_03694	0.48	-1.7
3,860,492	+		CCNA_03694	0.48	-0.4
3,860,492	+		CCNA_03694	0.48	+0.7
3,860,492	+		CCNA_03694	0.48	-0.1
3,860,495	-		CCNA_03694	0.48	-5.0
3,860,500	+		CCNA_03694	0.49	-3.5
3,860,500	-		CCNA_03694	0.49	-0.0
3,860,500	-		CCNA_03694	0.49	-2.0
3,860,500	-		CCNA_03694	0.49	-0.2
3,860,500	-		CCNA_03694	0.49	+0.1
3,860,500	-		CCNA_03694	0.49	+1.4
3,860,505	-		CCNA_03694	0.49	-2.0
3,860,546	+		CCNA_03694	0.54	+2.9
3,860,550	-		CCNA_03694	0.54	-1.0
3,860,550	-				+0.3
3,860,554	-		CCNA_03694	0.54	-2.8
3,860,554	-		CCNA_03694	0.54	-3.2
3,860,568	+		CCNA_03694	0.56	-2.8
3,860,568	+		CCNA_03694	0.56	-2.9
3,860,568	+		CCNA_03694	0.56	+0.5
3,860,568	+		CCNA_03694	0.56	+1.0
3,860,568	+		CCNA_03694	0.56	+0.5
3,860,568	+		CCNA_03694	0.56	-2.0
3,860,568	+		CCNA_03694	0.56	-1.7
3,860,568	+		CCNA_03694	0.56	+0.7
3,860,568	+		CCNA_03694	0.56	-3.5
3,860,576	-		CCNA_03694	0.57	-0.4
3,860,576	-		CCNA_03694	0.57	-1.3
3,860,576	-		CCNA_03694	0.57	-3.0
3,860,576	-		CCNA_03694	0.57	+1.0
3,860,578	+		CCNA_03694	0.57	-0.7
3,860,591	+		CCNA_03694	0.58	-2.6
3,860,604	+		CCNA_03694	0.60	-0.4
3,860,614	-		CCNA_03694	0.61	-1.8
3,860,623	+		CCNA_03694	0.62	-2.5
3,860,623	+		CCNA_03694	0.62	-3.5
3,860,623	+		CCNA_03694	0.62	+1.5
3,860,623	+		CCNA_03694	0.62	+0.8
3,860,625	+		CCNA_03694	0.62	-0.4
3,860,631	-		CCNA_03694	0.63	-2.2
3,860,631	-		CCNA_03694	0.63	-3.0
3,860,631	-		CCNA_03694	0.63	+0.7
3,860,633	-		CCNA_03694	0.63	-0.2
3,860,638	+		CCNA_03694	0.63	-1.2
3,860,649	+		CCNA_03694	0.64	-0.8
3,860,659	-		CCNA_03694	0.66	-3.6
3,860,661	-		CCNA_03694	0.66	+0.3
3,860,678	-		CCNA_03694	0.68	-2.5
3,860,686	-		CCNA_03694	0.68	-2.8
3,860,706	+		CCNA_03694	0.70	-0.2
3,860,746	+		CCNA_03694	0.75	-0.0
3,860,770	+		CCNA_03694	0.77	-1.7
3,860,770	+		CCNA_03694	0.77	-2.8
3,860,770	+		CCNA_03694	0.77	-0.7
3,860,770	+		CCNA_03694	0.77	+0.0
3,860,770	+		CCNA_03694	0.77	-2.1
3,860,770	+		CCNA_03694	0.77	+3.4
3,860,770	+		CCNA_03694	0.77	-2.1
3,860,770	+		CCNA_03694	0.77	-0.5
3,860,778	-		CCNA_03694	0.78	-1.9
3,860,778	-		CCNA_03694	0.78	-2.7
3,860,778	-		CCNA_03694	0.78	-2.1
3,860,778	-		CCNA_03694	0.78	+1.0
3,860,778	-		CCNA_03694	0.78	-0.7
3,860,782	-		CCNA_03694	0.79	-1.5
3,860,798	-		CCNA_03694	0.80	-1.3
3,860,815	-		CCNA_03694	0.82	-0.0
3,860,866	+		CCNA_03694	0.87	-0.7
3,860,874	-		CCNA_03694	0.88	-2.6
3,860,897	-				-0.9
3,860,916	-				-1.5
3,860,918	+				-0.7
3,860,928	+				+0.4
3,860,928	+				+1.3
3,860,928	+				-3.1
3,860,931	-				-0.8
3,860,936	+				-2.2
3,860,936	-				-0.3
3,860,936	-				-0.2
3,860,936	-				-1.1
3,860,936	-				-0.5
3,860,936	-				+0.6
3,860,936	-				-0.4
3,860,979	+				-2.6
3,860,995	+				-1.0
3,861,010	+				-0.2
3,861,046	-				-1.9
3,861,048	+				-0.4
3,861,048	+				+2.9
3,861,056	-				+2.6
3,861,056	-				-2.3
3,861,057	+				+2.6
3,861,061	-				-1.2
3,861,061	-				-1.9
3,861,061	-				-3.5
3,861,064	+				-2.1
3,861,091	-				-3.6
3,861,100	+				+0.3
3,861,120	+				-3.5
3,861,120	+				-1.3
3,861,139	+				-0.9
3,861,147	-				-2.5
3,861,147	-				-2.7
3,861,182	+				-0.7
3,861,268	+		CCNA_03695	0.11	+0.7
3,861,352	+		CCNA_03695	0.17	+0.8
3,861,373	+		CCNA_03695	0.18	-3.4
3,861,374	-		CCNA_03695	0.18	-1.2
3,861,379	-		CCNA_03695	0.18	-2.6
3,861,379	-		CCNA_03695	0.18	-1.1
3,861,386	+		CCNA_03695	0.19	-1.1
3,861,386	+		CCNA_03695	0.19	-1.8
3,861,386	+		CCNA_03695	0.19	-0.9
3,861,394	-		CCNA_03695	0.19	-3.1
3,861,398	+		CCNA_03695	0.20	-0.9
3,861,406	-		CCNA_03695	0.20	+0.3
3,861,428	+		CCNA_03695	0.22	+0.1
3,861,434	+		CCNA_03695	0.22	-1.0
3,861,452	+		CCNA_03695	0.23	-0.7
3,861,469	+		CCNA_03695	0.24	-0.7
3,861,469	+		CCNA_03695	0.24	-1.7
3,861,514	-		CCNA_03695	0.27	-2.4
3,861,547	-		CCNA_03695	0.30	+1.7
3,861,565	-		CCNA_03695	0.31	-1.0
3,861,570	-		CCNA_03695	0.31	-0.7
3,861,609	-		CCNA_03695	0.34	-1.3
3,861,609	-		CCNA_03695	0.34	-0.9
3,861,610	-		CCNA_03695	0.34	-1.0
3,861,612	+		CCNA_03695	0.34	-1.9
3,861,612	+		CCNA_03695	0.34	-0.3
3,861,620	-		CCNA_03695	0.34	-2.1
3,861,636	-				-1.1
3,861,637	-		CCNA_03695	0.35	-2.6
3,861,653	+		CCNA_03695	0.36	-2.0
3,861,656	-		CCNA_03695	0.37	-2.1
3,861,663	-		CCNA_03695	0.37	-2.4
3,861,675	+		CCNA_03695	0.38	-2.0
3,861,675	+		CCNA_03695	0.38	-0.9
3,861,691	+		CCNA_03695	0.39	-0.9
3,861,691	+		CCNA_03695	0.39	-2.7
3,861,699	-		CCNA_03695	0.40	-1.9
3,861,699	-		CCNA_03695	0.40	-2.0
3,861,731	+		CCNA_03695	0.42	-0.1
3,861,733	+		CCNA_03695	0.42	-3.9
3,861,739	-		CCNA_03695	0.42	-0.7
3,861,756	+		CCNA_03695	0.43	+0.2
3,861,780	+		CCNA_03695	0.45	-1.3
3,861,788	-		CCNA_03695	0.45	-0.2
3,861,788	-		CCNA_03695	0.45	-2.0
3,861,806	+		CCNA_03695	0.47	-0.1
3,861,806	+		CCNA_03695	0.47	-2.4
3,861,828	-		CCNA_03695	0.48	-0.2
3,861,855	+		CCNA_03695	0.50	-3.0
3,861,862	-		CCNA_03695	0.50	-2.8
3,861,862	-		CCNA_03695	0.50	-1.2
3,861,876	+		CCNA_03695	0.51	-1.4
3,861,876	+		CCNA_03695	0.51	-2.5
3,861,876	+		CCNA_03695	0.51	-3.8
3,861,884	-		CCNA_03695	0.52	-2.4
3,861,884	-		CCNA_03695	0.52	-2.9
3,861,884	-		CCNA_03695	0.52	-1.2
3,861,932	+		CCNA_03695	0.55	-2.2
3,861,942	+		CCNA_03695	0.55	-0.4
3,861,953	+		CCNA_03695	0.56	-4.4
3,861,953	+		CCNA_03695	0.56	+0.5
3,861,953	+		CCNA_03695	0.56	-0.6
3,861,961	-		CCNA_03695	0.57	-1.6
3,861,961	-		CCNA_03695	0.57	-0.3
3,861,963	+		CCNA_03695	0.57	-1.4
3,861,975	-		CCNA_03695	0.58	-0.6
3,861,977	+		CCNA_03695	0.58	-1.7
3,861,978	+		CCNA_03695	0.58	-1.5
3,861,986	-		CCNA_03695	0.58	-1.1
3,861,986	-		CCNA_03695	0.58	-3.7
3,861,986	-		CCNA_03695	0.58	+0.5
3,861,994	+		CCNA_03695	0.59	-0.9
3,862,002	-		CCNA_03695	0.59	-1.8
3,862,002	-		CCNA_03695	0.59	-1.0
3,862,002	-		CCNA_03695	0.59	+1.6
3,862,005	+		CCNA_03695	0.60	-0.6
3,862,044	+		CCNA_03695	0.62	-2.3
3,862,046	-		CCNA_03695	0.62	-1.7
3,862,067	-		CCNA_03695	0.64	-1.1
3,862,077	-		CCNA_03695	0.64	+0.6
3,862,081	+		CCNA_03695	0.65	-1.8
3,862,082	+		CCNA_03695	0.65	-1.9
3,862,082	+		CCNA_03695	0.65	-0.0
3,862,082	+		CCNA_03695	0.65	-1.0
3,862,082	+		CCNA_03695	0.65	-1.6
3,862,082	+		CCNA_03695	0.65	+1.4
3,862,082	+		CCNA_03695	0.65	-0.6
3,862,082	+		CCNA_03695	0.65	-3.2
3,862,082	+		CCNA_03695	0.65	-1.1
3,862,082	+		CCNA_03695	0.65	-1.4
3,862,089	-		CCNA_03695	0.65	-2.3
3,862,090	-		CCNA_03695	0.65	-0.2
3,862,090	-		CCNA_03695	0.65	-0.1
3,862,090	-		CCNA_03695	0.65	-3.3
3,862,090	-		CCNA_03695	0.65	-5.1
3,862,090	-		CCNA_03695	0.65	-1.8
3,862,090	-		CCNA_03695	0.65	-3.0
3,862,090	-		CCNA_03695	0.65	-1.0
3,862,090	-		CCNA_03695	0.65	+1.8
3,862,090	-		CCNA_03695	0.65	-1.9
3,862,090	-		CCNA_03695	0.65	-2.7
3,862,090	-		CCNA_03695	0.65	-1.9
3,862,090	-		CCNA_03695	0.65	-1.4
3,862,090	-		CCNA_03695	0.65	+0.1
3,862,090	-		CCNA_03695	0.65	-2.7
3,862,090	-		CCNA_03695	0.65	-1.0
3,862,090	-		CCNA_03695	0.65	+1.0
3,862,095	+		CCNA_03695	0.66	-2.7
3,862,109	+		CCNA_03695	0.66	-1.3
3,862,109	+		CCNA_03695	0.66	-4.0
3,862,119	+		CCNA_03695	0.67	-1.9
3,862,128	+		CCNA_03695	0.68	-1.9
3,862,152	-		CCNA_03695	0.69	-1.3
3,862,166	-		CCNA_03695	0.70	-1.0
3,862,193	-		CCNA_03695	0.72	-0.9
3,862,218	-		CCNA_03695	0.74	-0.6
3,862,218	-		CCNA_03695	0.74	-1.5
3,862,331	+		CCNA_03695	0.81	-0.7
3,862,333	+		CCNA_03695	0.81	-1.4
3,862,333	+		CCNA_03695	0.81	-2.7
3,862,333	+		CCNA_03695	0.81	-0.6
3,862,339	-		CCNA_03695	0.82	-3.1
3,862,339	-		CCNA_03695	0.82	-2.5
3,862,341	-		CCNA_03695	0.82	+0.2
3,862,341	-		CCNA_03695	0.82	+1.0
3,862,341	-		CCNA_03695	0.82	-2.8
3,862,352	+		CCNA_03695	0.82	+1.8
3,862,352	+		CCNA_03695	0.82	+0.6
3,862,352	+		CCNA_03695	0.82	-3.0
3,862,397	+		CCNA_03695	0.85	+0.5
3,862,448	-		CCNA_03695	0.89	-0.4
3,862,451	+		CCNA_03695	0.89	-0.7
3,862,456	+		CCNA_03695	0.89	-1.7
3,862,456	+		CCNA_03695	0.89	-0.5
3,862,456	+		CCNA_03695	0.89	-1.7
3,862,456	+		CCNA_03695	0.89	-1.0
3,862,464	-		CCNA_03695	0.90	-2.2
3,862,464	-		CCNA_03695	0.90	-4.4
3,862,464	-		CCNA_03695	0.90	+0.3
3,862,464	-		CCNA_03695	0.90	+2.1
3,862,464	-		CCNA_03695	0.90	+6.8
3,862,464	-		CCNA_03695	0.90	-3.9
3,862,465	-		CCNA_03695	0.90	-2.8
3,862,516	+				-2.4
3,862,543	-				-0.4
3,862,550	-				-2.7
3,862,567	+				-1.8
3,862,575	-				-0.7
3,862,575	-				-1.7
3,862,587	+				-0.7
3,862,590	-				-1.1
3,862,593	+				+2.0
3,862,593	+				-0.9
3,862,593	+				+1.0
3,862,601	-				-1.6
3,862,601	-				+2.6
3,862,601	-				-2.6
3,862,612	+				-0.9
3,862,617	+				-0.1
3,862,617	+				+0.6
3,862,620	-				-2.6
3,862,625	-				-1.4
3,862,627	-				+1.6
3,862,661	+				-1.6
3,862,690	+				+2.1
3,862,690	+				-1.6
3,862,690	+				+0.5
3,862,698	-				-1.1
3,862,698	-				-0.2
3,862,716	+				-1.4
3,862,716	+				-1.7
3,862,716	+				-0.4
3,862,716	+				-1.9
3,862,716	+				+0.6
3,862,724	-				-2.3
3,862,734	-				+1.6
3,862,734	-				-1.1
3,862,741	-				+5.2
3,862,775	-				-0.0
3,862,812	+				-0.2
3,862,895	+				-0.3
3,862,895	+				-0.9
3,862,895	+				-1.1
3,862,903	-				-2.5
3,862,903	-				-2.8
3,862,903	-				-2.2
3,863,013	+		CCNA_03696	0.15	-3.4
3,863,013	+		CCNA_03696	0.15	-0.8
3,863,013	+		CCNA_03696	0.15	-1.5
3,863,013	+		CCNA_03696	0.15	+0.7
3,863,019	+		CCNA_03696	0.15	+1.1
3,863,021	-		CCNA_03696	0.15	-1.6
3,863,021	-		CCNA_03696	0.15	+5.3
3,863,045	+		CCNA_03696	0.16	-1.8
3,863,059	+		CCNA_03696	0.17	-2.3
3,863,065	-		CCNA_03696	0.17	-2.5
3,863,067	-		CCNA_03696	0.17	-0.7
3,863,067	-		CCNA_03696	0.17	-0.4
3,863,117	-		CCNA_03696	0.20	-0.7
3,863,126	+		CCNA_03696	0.20	-3.3
3,863,140	+		CCNA_03696	0.21	-2.0
3,863,148	-		CCNA_03696	0.21	-0.2
3,863,195	+		CCNA_03696	0.24	+0.1
3,863,195	+		CCNA_03696	0.24	-0.7
3,863,195	+		CCNA_03696	0.24	+0.2
3,863,203	-		CCNA_03696	0.24	-1.4
3,863,203	-		CCNA_03696	0.24	-0.2
3,863,214	+		CCNA_03696	0.25	-1.5
3,863,235	+		CCNA_03696	0.26	-2.7
3,863,256	+		CCNA_03696	0.27	-2.4
3,863,256	+		CCNA_03696	0.27	-0.6
3,863,354	-		CCNA_03696	0.32	-0.4
3,863,357	-		CCNA_03696	0.32	+0.3
3,863,359	+		CCNA_03696	0.32	-2.8
3,863,367	-		CCNA_03696	0.33	+1.2
3,863,376	+		CCNA_03696	0.33	-2.9
3,863,376	+		CCNA_03696	0.33	-3.8
3,863,398	+		CCNA_03696	0.34	-0.8
3,863,419	-		CCNA_03696	0.35	-0.7
3,863,452	+		CCNA_03696	0.37	-2.5
3,863,468	+		CCNA_03696	0.38	-0.1
3,863,502	+		CCNA_03696	0.40	-2.3
3,863,510	+		CCNA_03696	0.40	-2.1
3,863,510	+		CCNA_03696	0.40	-1.4
3,863,511	+		CCNA_03696	0.40	-2.3
3,863,512	-		CCNA_03696	0.40	+0.3
3,863,519	-		CCNA_03696	0.41	-3.1
3,863,526	-		CCNA_03696	0.41	-2.9
3,863,527	+		CCNA_03696	0.41	-0.6
3,863,537	+		CCNA_03696	0.41	+0.1
3,863,537	+		CCNA_03696	0.41	-1.1
3,863,537	+		CCNA_03696	0.41	+0.6
3,863,537	+		CCNA_03696	0.41	+0.2
3,863,537	+		CCNA_03696	0.41	-0.9
3,863,537	+		CCNA_03696	0.41	-1.4
3,863,537	+		CCNA_03696	0.41	-2.0
3,863,537	+		CCNA_03696	0.41	-0.0
3,863,537	+		CCNA_03696	0.41	-1.6
3,863,537	+		CCNA_03696	0.41	-2.8
3,863,537	+		CCNA_03696	0.41	+0.0
3,863,537	+		CCNA_03696	0.41	-0.8
3,863,537	+		CCNA_03696	0.41	+0.3
3,863,537	+		CCNA_03696	0.41	-0.8
3,863,537	+		CCNA_03696	0.41	+0.2
3,863,545	-		CCNA_03696	0.42	-2.6
3,863,545	-		CCNA_03696	0.42	+0.6
3,863,545	-		CCNA_03696	0.42	-0.6
3,863,545	-		CCNA_03696	0.42	-1.1
3,863,545	-		CCNA_03696	0.42	-0.2
3,863,545	-		CCNA_03696	0.42	+1.6
3,863,545	-		CCNA_03696	0.42	+2.6
3,863,545	-		CCNA_03696	0.42	-2.2
3,863,545	-		CCNA_03696	0.42	-0.2
3,863,545	-		CCNA_03696	0.42	-0.8
3,863,545	-		CCNA_03696	0.42	-2.2
3,863,545	-		CCNA_03696	0.42	-1.0
3,863,545	-		CCNA_03696	0.42	+0.3
3,863,545	-		CCNA_03696	0.42	-1.7
3,863,545	-		CCNA_03696	0.42	-1.9
3,863,545	-		CCNA_03696	0.42	-0.6
3,863,545	-		CCNA_03696	0.42	-4.6
3,863,555	-		CCNA_03696	0.42	-2.0
3,863,568	+		CCNA_03696	0.43	-1.4
3,863,581	-		CCNA_03696	0.44	-4.7
3,863,590	+		CCNA_03696	0.44	-0.9
3,863,601	+		CCNA_03696	0.45	-4.1
3,863,601	+		CCNA_03696	0.45	-2.1
3,863,608	+		CCNA_03696	0.45	-0.1