Strain Fitness in Caulobacter crescentus NA1000 around CCNA_03601

Experiment: PYE_noCalcium 30C survival rep2 28 days

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	PYE_noCalcium 30C survival rep2 28 days
3,754,067	+				-0.4
3,754,088	+				-0.9
3,754,092	-				-0.1
3,754,103	-				-1.6
3,754,103	-				-2.1
3,754,105	+				+1.0
3,754,113	-				-0.7
3,754,113	-				-1.0
3,754,113	-				-2.0
3,754,113	-				-1.3
3,754,113	-				+2.6
3,754,113	-				-0.6
3,754,113	-				-0.4
3,754,179	+				+0.2
3,754,193	-				-1.8
3,754,198	-		CCNA_03600	0.10	-3.1
3,754,200	+		CCNA_03600	0.10	-0.0
3,754,208	-		CCNA_03600	0.11	-1.5
3,754,208	-		CCNA_03600	0.11	+0.3
3,754,213	-		CCNA_03600	0.12	+1.3
3,754,245	+		CCNA_03600	0.16	-0.4
3,754,253	-		CCNA_03600	0.17	-0.4
3,754,268	+		CCNA_03600	0.19	+0.1
3,754,318	+		CCNA_03600	0.26	+0.2
3,754,323	+		CCNA_03600	0.26	+0.5
3,754,326	-		CCNA_03600	0.27	-0.2
3,754,336	-		CCNA_03600	0.28	+0.3
3,754,338	+		CCNA_03600	0.28	+0.7
3,754,377	+		CCNA_03600	0.33	-1.5
3,754,380	-		CCNA_03600	0.34	-1.6
3,754,398	+		CCNA_03600	0.36	+1.7
3,754,445	+		CCNA_03600	0.42	+0.0
3,754,461	+		CCNA_03600	0.44	+0.4
3,754,469	-		CCNA_03600	0.45	-0.7
3,754,478	+		CCNA_03600	0.46	+2.6
3,754,478	+		CCNA_03600	0.46	+3.4
3,754,478	+		CCNA_03600	0.46	+0.7
3,754,486	-		CCNA_03600	0.47	-1.8
3,754,486	-		CCNA_03600	0.47	-0.5
3,754,510	-		CCNA_03600	0.51	-0.4
3,754,583	-		CCNA_03600	0.60	-1.8
3,754,596	+		CCNA_03600	0.62	+0.3
3,754,598	+		CCNA_03600	0.62	-0.9
3,754,606	-		CCNA_03600	0.63	-1.3
3,754,638	-		CCNA_03600	0.67	-1.8
3,754,681	-		CCNA_03600	0.73	-2.2
3,754,720	+		CCNA_03600	0.78	+0.2
3,754,760	-		CCNA_03600	0.83	-0.2
3,754,767	-		CCNA_03600	0.84	-0.5
3,754,785	+		CCNA_03600	0.86	-1.1
3,754,793	-		CCNA_03600	0.87	-2.3
3,754,827	-				+0.1
3,754,879	+				-2.5
3,754,879	+				-1.0
3,754,879	+				-1.0
3,754,879	+				+0.3
3,754,879	+				-1.1
3,754,879	+				+0.4
3,754,887	-				+1.0
3,754,887	-				-0.4
3,754,887	-				-0.7
3,754,887	-				+1.0
3,754,949	+				-1.5
3,754,949	+				-0.8
3,754,967	+				-1.1
3,754,969	+				-0.9
3,754,969	+				-0.9
3,755,042	+				-1.7
3,755,081	-		CCNA_03601	0.10	+1.0
3,755,120	+		CCNA_03601	0.16	-4.1
3,755,120	+		CCNA_03601	0.16	-0.6
3,755,120	+		CCNA_03601	0.16	-1.8
3,755,120	+		CCNA_03601	0.16	-0.6
3,755,120	+		CCNA_03601	0.16	-1.3
3,755,128	-		CCNA_03601	0.17	-2.2
3,755,128	-		CCNA_03601	0.17	-1.8
3,755,134	-		CCNA_03601	0.18	-1.3
3,755,181	+		CCNA_03601	0.25	-2.0
3,755,184	-		CCNA_03601	0.25	+1.6
3,755,206	+		CCNA_03601	0.28	-0.9
3,755,214	+		CCNA_03601	0.29	-2.8
3,755,214	+		CCNA_03601	0.29	-3.0
3,755,214	-		CCNA_03601	0.29	-3.0
3,755,227	-		CCNA_03601	0.31	-0.4
3,755,249	+		CCNA_03601	0.34	-3.7
3,755,249	+		CCNA_03601	0.34	+0.2
3,755,249	+		CCNA_03601	0.34	-2.1
3,755,257	-		CCNA_03601	0.35	-2.1
3,755,257	-		CCNA_03601	0.35	-2.9
3,755,257	-		CCNA_03601	0.35	+0.3
3,755,257	-		CCNA_03601	0.35	-0.2
3,755,290	-		CCNA_03601	0.40	-2.7
3,755,292	+		CCNA_03601	0.40	-1.5
3,755,292	+		CCNA_03601	0.40	-0.4
3,755,292	+		CCNA_03601	0.40	-1.0
3,755,292	+		CCNA_03601	0.40	-3.3
3,755,339	+		CCNA_03601	0.47	-2.2
3,755,348	+		CCNA_03601	0.48	-3.1
3,755,392	+		CCNA_03601	0.55	-2.5
3,755,392	+		CCNA_03601	0.55	-1.4
3,755,400	-		CCNA_03601	0.56	-1.4
3,755,400	-		CCNA_03601	0.56	-2.1
3,755,455	+		CCNA_03601	0.64	-0.4
3,755,455	+		CCNA_03601	0.64	-2.2
3,755,465	+		CCNA_03601	0.65	-1.1
3,755,465	+		CCNA_03601	0.65	-0.6
3,755,465	+		CCNA_03601	0.65	-2.2
3,755,465	+		CCNA_03601	0.65	-0.4
3,755,522	+		CCNA_03601	0.73	+0.2
3,755,522	+		CCNA_03601	0.73	-1.0
3,755,527	+		CCNA_03601	0.74	+0.6
3,755,527	+		CCNA_03601	0.74	-2.8
3,755,530	-		CCNA_03601	0.75	+2.6
3,755,535	-		CCNA_03601	0.75	+2.6
3,755,535	-		CCNA_03601	0.75	-2.6
3,755,654	+				-0.3
3,755,654	+				-1.0
3,755,657	-				+0.3
3,755,659	+				-2.3
3,755,662	+				+0.2
3,755,662	-				-1.6
3,755,667	-				+1.6
3,755,672	+				-0.2
3,755,677	+				+0.0
3,755,682	+				-0.7
3,755,687	+				-1.3
3,755,687	+				-0.1
3,755,687	+				-1.4
3,755,687	+				-1.5
3,755,695	-				+0.0
3,755,695	-				-1.9
3,755,695	-				-1.0
3,755,701	+				+1.1
3,755,709	-				+0.5
3,755,780	+				+0.5
3,755,841	+				-1.2
3,755,841	+				+0.4
3,755,842	-				-0.5
3,755,879	+		CCNA_03602	0.12	+1.8
3,755,879	+		CCNA_03602	0.12	+0.5
3,755,894	+		CCNA_03602	0.13	+0.2
3,755,931	+		CCNA_03602	0.16	+0.1
3,755,938	+		CCNA_03602	0.17	-0.1
3,755,939	-		CCNA_03602	0.17	-2.6
3,755,941	-		CCNA_03602	0.17	-1.2
3,755,948	+		CCNA_03602	0.18	+0.1
3,756,017	+		CCNA_03602	0.23	+0.5
3,756,039	+		CCNA_03602	0.25	+0.3
3,756,084	+		CCNA_03602	0.28	-2.0
3,756,084	+		CCNA_03602	0.28	-2.3
3,756,084	+		CCNA_03602	0.28	-2.2
3,756,084	+		CCNA_03602	0.28	+1.2
3,756,092	-		CCNA_03602	0.29	-0.0
3,756,092	-		CCNA_03602	0.29	+0.3
3,756,137	-		CCNA_03602	0.32	+0.6
3,756,158	+		CCNA_03602	0.34	+0.3
3,756,164	-		CCNA_03602	0.35	-1.5
3,756,186	-		CCNA_03602	0.36	-3.4
3,756,190	+		CCNA_03602	0.37	+1.7
3,756,190	+		CCNA_03602	0.37	+0.2
3,756,190	+		CCNA_03602	0.37	+2.8
3,756,190	+		CCNA_03602	0.37	+1.0
3,756,196	-		CCNA_03602	0.37	-0.5
3,756,198	-		CCNA_03602	0.37	+1.5
3,756,198	-		CCNA_03602	0.37	-0.4
3,756,200	+		CCNA_03602	0.37	+1.7
3,756,200	+		CCNA_03602	0.37	+1.6
3,756,200	+		CCNA_03602	0.37	+0.3
3,756,208	-		CCNA_03602	0.38	-0.4
3,756,263	-		CCNA_03602	0.42	-0.2
3,756,263	-		CCNA_03602	0.42	-1.6
3,756,286	-		CCNA_03602	0.44	-2.4
3,756,290	+		CCNA_03602	0.44	+0.6
3,756,335	+		CCNA_03602	0.48	+1.1
3,756,379	+		CCNA_03602	0.51	+0.8
3,756,446	-		CCNA_03602	0.57	-1.5
3,756,463	+		CCNA_03602	0.58	+1.0
3,756,470	+		CCNA_03602	0.59	-2.3
3,756,496	-		CCNA_03602	0.61	+0.6
3,756,515	+		CCNA_03602	0.62	-0.5
3,756,590	+		CCNA_03602	0.68	+0.3
3,756,600	+		CCNA_03602	0.69	+2.2
3,756,600	+		CCNA_03602	0.69	+1.6
3,756,600	+		CCNA_03602	0.69	-0.2
3,756,664	+		CCNA_03602	0.74	+0.5
3,756,667	-		CCNA_03602	0.74	-3.1
3,756,667	-		CCNA_03602	0.74	-1.0
3,756,669	+		CCNA_03602	0.74	-1.9
3,756,682	-		CCNA_03602	0.75	+0.2