Strain Fitness in Caulobacter crescentus NA1000 around CCNA_03247

Experiment: PYE_noCalcium 30C survival rep2 28 days

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	PYE_noCalcium 30C survival rep2 28 days
3,412,824	+		CCNA_03246	0.43	-0.9
3,412,829	+		CCNA_03246	0.43	-0.7
3,412,829	+		CCNA_03246	0.43	-1.9
3,412,832	-		CCNA_03246	0.43	+1.3
3,412,837	-		CCNA_03246	0.44	-2.7
3,412,874	+		CCNA_03246	0.47	-0.4
3,412,943	+		CCNA_03246	0.54	+2.6
3,412,951	+		CCNA_03246	0.54	+0.0
3,412,951	-		CCNA_03246	0.54	-1.7
3,412,951	-		CCNA_03246	0.54	+1.7
3,412,963	+		CCNA_03246	0.56	+0.3
3,412,978	-		CCNA_03246	0.57	-0.7
3,412,979	-		CCNA_03246	0.57	-1.1
3,412,997	-		CCNA_03246	0.59	+2.6
3,413,010	-		CCNA_03246	0.60	-1.6
3,413,062	+		CCNA_03246	0.65	-1.9
3,413,084	+				+0.6
3,413,092	-		CCNA_03246	0.68	+3.4
3,413,092	-		CCNA_03246	0.68	-1.6
3,413,092	-		CCNA_03246	0.68	-2.6
3,413,107	+		CCNA_03246	0.69	-0.6
3,413,115	-		CCNA_03246	0.70	+0.3
3,413,122	+		CCNA_03246	0.71	-1.6
3,413,163	+		CCNA_03246	0.74	-2.8
3,413,183	+		CCNA_03246	0.76	-0.4
3,413,198	-		CCNA_03246	0.78	+0.2
3,413,225	-		CCNA_03246	0.80	-0.4
3,413,249	-		CCNA_03246	0.82	-1.4
3,413,263	+		CCNA_03246	0.84	-2.8
3,413,277	+		CCNA_03246	0.85	-0.9
3,413,296	-		CCNA_03246	0.87	-0.4
3,413,303	+		CCNA_03246	0.88	+0.6
3,413,310	+		CCNA_03246	0.88	-0.5
3,413,311	-		CCNA_03246	0.88	+1.0
3,413,311	-		CCNA_03246	0.88	-0.7
3,413,331	+				-1.1
3,413,339	-				-1.1
3,413,392	+				-1.1
3,413,392	+				+2.6
3,413,392	+				-0.9
3,413,394	+				-0.6
3,413,402	-				-1.5
3,413,416	+				+2.5
3,413,466	-				+0.8
3,413,490	-				-0.9
3,413,500	-				+0.5
3,413,559	+				+0.3
3,413,559	+				+1.0
3,413,559	+				-1.0
3,413,559	+				+1.0
3,413,565	-				-0.5
3,413,565	-				-0.2
3,413,567	-				-1.0
3,413,567	-				+1.7
3,413,567	-				-0.6
3,413,637	+				-1.6
3,413,656	+				-0.6
3,413,656	+				+1.2
3,413,658	+				-0.9
3,413,688	+				-0.1
3,413,727	+				+0.9
3,413,727	+				+2.3
3,413,758	-				-0.6
3,413,764	+				-0.0
3,413,764	+				+2.9
3,413,774	+				-0.4
3,413,879	-				-1.2
3,413,899	+				-0.3
3,413,913	+				+0.7
3,413,918	+				+0.8
3,413,921	-				-2.0
3,413,947	+		CCNA_03247	0.10	+1.4
3,413,972	+		CCNA_03247	0.12	+0.3
3,414,006	+		CCNA_03247	0.13	+0.3
3,414,016	-		CCNA_03247	0.14	+2.6
3,414,016	-		CCNA_03247	0.14	+2.0
3,414,028	+		CCNA_03247	0.15	+1.6
3,414,097	-		CCNA_03247	0.18	-0.2
3,414,138	+		CCNA_03247	0.21	+3.1
3,414,146	-		CCNA_03247	0.21	-0.2
3,414,164	+		CCNA_03247	0.22	+4.0
3,414,164	+		CCNA_03247	0.22	-0.7
3,414,164	+		CCNA_03247	0.22	-0.3
3,414,164	+		CCNA_03247	0.22	-0.8
3,414,164	+		CCNA_03247	0.22	-0.0
3,414,164	+		CCNA_03247	0.22	+0.9
3,414,164	+		CCNA_03247	0.22	-0.8
3,414,164	+		CCNA_03247	0.22	+2.6
3,414,172	-		CCNA_03247	0.22	-0.2
3,414,172	-		CCNA_03247	0.22	-0.5
3,414,172	-		CCNA_03247	0.22	+2.6
3,414,172	-		CCNA_03247	0.22	+0.0
3,414,172	-		CCNA_03247	0.22	+2.6
3,414,172	-		CCNA_03247	0.22	+5.8
3,414,172	-		CCNA_03247	0.22	-1.3
3,414,172	-		CCNA_03247	0.22	+0.6
3,414,172	-		CCNA_03247	0.22	-1.5
3,414,172	-		CCNA_03247	0.22	-1.0
3,414,172	-		CCNA_03247	0.22	-3.8
3,414,179	+		CCNA_03247	0.23	+0.3
3,414,179	+		CCNA_03247	0.23	+1.3
3,414,179	+		CCNA_03247	0.23	+0.9
3,414,222	+		CCNA_03247	0.25	+1.5
3,414,222	+		CCNA_03247	0.25	+1.1
3,414,222	+		CCNA_03247	0.25	+1.2
3,414,227	+		CCNA_03247	0.25	+1.5
3,414,227	+		CCNA_03247	0.25	+0.4
3,414,235	+		CCNA_03247	0.26	+2.2
3,414,239	+		CCNA_03247	0.26	+1.7
3,414,240	-		CCNA_03247	0.26	-0.2
3,414,272	+		CCNA_03247	0.28	-0.7
3,414,272	+		CCNA_03247	0.28	+1.0
3,414,285	+		CCNA_03247	0.29	+1.6
3,414,285	+		CCNA_03247	0.29	-0.1
3,414,285	+		CCNA_03247	0.29	-0.1
3,414,285	+		CCNA_03247	0.29	-0.4
3,414,285	+		CCNA_03247	0.29	+0.5
3,414,293	-		CCNA_03247	0.29	-2.1
3,414,293	-		CCNA_03247	0.29	+0.1
3,414,300	+		CCNA_03247	0.29	+2.0
3,414,300	+		CCNA_03247	0.29	+0.0
3,414,333	+		CCNA_03247	0.31	+1.8
3,414,341	-		CCNA_03247	0.32	+0.0
3,414,341	-		CCNA_03247	0.32	-1.4
3,414,349	+		CCNA_03247	0.32	-1.5
3,414,354	+		CCNA_03247	0.32	+1.1
3,414,359	+		CCNA_03247	0.33	+1.6
3,414,372	-		CCNA_03247	0.33	-1.8
3,414,372	-		CCNA_03247	0.33	-1.6
3,414,467	-		CCNA_03247	0.38	-3.5
3,414,482	+		CCNA_03247	0.39	+1.0
3,414,506	+		CCNA_03247	0.40	+1.5
3,414,537	+		CCNA_03247	0.42	+3.8
3,414,537	+		CCNA_03247	0.42	+1.8
3,414,537	+		CCNA_03247	0.42	+0.5
3,414,537	+		CCNA_03247	0.42	-0.0
3,414,537	+		CCNA_03247	0.42	-0.4
3,414,545	-		CCNA_03247	0.43	+0.6
3,414,548	+		CCNA_03247	0.43	-1.7
3,414,556	-		CCNA_03247	0.43	-0.7
3,414,598	-		CCNA_03247	0.45	-0.4
3,414,627	+		CCNA_03247	0.47	-0.5
3,414,627	+		CCNA_03247	0.47	+1.0
3,414,627	+		CCNA_03247	0.47	+0.4
3,414,627	+		CCNA_03247	0.47	+2.9
3,414,627	+		CCNA_03247	0.47	+0.3
3,414,635	-		CCNA_03247	0.48	+2.3
3,414,635	-		CCNA_03247	0.48	-0.9
3,414,642	+		CCNA_03247	0.48	+1.4
3,414,642	+		CCNA_03247	0.48	-0.4
3,414,660	+		CCNA_03247	0.49	+3.2
3,414,692	-		CCNA_03247	0.51	-1.7
3,414,695	+		CCNA_03247	0.51	+0.4
3,414,695	+		CCNA_03247	0.51	-0.3
3,414,710	+		CCNA_03247	0.52	+0.0
3,414,728	-		CCNA_03247	0.53	-1.4
3,414,730	-		CCNA_03247	0.53	+0.7
3,414,763	+		CCNA_03247	0.54	+1.1
3,414,763	+		CCNA_03247	0.54	-1.8
3,414,771	-		CCNA_03247	0.55	+0.0
3,414,771	-		CCNA_03247	0.55	-0.5
3,414,776	-		CCNA_03247	0.55	+1.6
3,414,805	-		CCNA_03247	0.57	-1.1
3,414,827	+		CCNA_03247	0.58	-1.0
3,414,827	+		CCNA_03247	0.58	+2.0
3,414,830	-		CCNA_03247	0.58	-0.4
3,414,855	-		CCNA_03247	0.59	-1.9
3,414,859	+		CCNA_03247	0.60	+1.2
3,414,870	-		CCNA_03247	0.60	-2.6
3,414,872	+		CCNA_03247	0.60	+1.6
3,414,924	-		CCNA_03247	0.63	+1.3
3,414,980	+		CCNA_03247	0.66	-2.0
3,415,038	+		CCNA_03247	0.69	+0.8
3,415,038	+		CCNA_03247	0.69	-0.9
3,415,038	+		CCNA_03247	0.69	+0.8
3,415,038	+		CCNA_03247	0.69	+1.2
3,415,038	+		CCNA_03247	0.69	+0.1
3,415,046	-		CCNA_03247	0.70	-1.0
3,415,046	-		CCNA_03247	0.70	-1.5
3,415,046	-		CCNA_03247	0.70	-1.1
3,415,046	-		CCNA_03247	0.70	-1.0
3,415,046	-		CCNA_03247	0.70	-1.1
3,415,046	-		CCNA_03247	0.70	-1.4
3,415,048	+		CCNA_03247	0.70	+0.6
3,415,048	+		CCNA_03247	0.70	+0.4
3,415,056	-		CCNA_03247	0.70	+0.0
3,415,056	-		CCNA_03247	0.70	-1.7
3,415,069	+		CCNA_03247	0.71	+0.8
3,415,155	+		CCNA_03247	0.76	+0.6
3,415,155	+		CCNA_03247	0.76	+0.8
3,415,163	-		CCNA_03247	0.76	-0.6
3,415,163	-		CCNA_03247	0.76	-2.1
3,415,163	-		CCNA_03247	0.76	-1.0
3,415,163	-		CCNA_03247	0.76	-1.4
3,415,163	-		CCNA_03247	0.76	-3.0
3,415,163	-		CCNA_03247	0.76	-0.7
3,415,168	-		CCNA_03247	0.76	+1.0
3,415,191	+		CCNA_03247	0.78	+1.0
3,415,192	+		CCNA_03247	0.78	+0.7
3,415,192	+		CCNA_03247	0.78	+0.7
3,415,200	-		CCNA_03247	0.78	-2.0
3,415,210	-		CCNA_03247	0.79	+1.9
3,415,232	-		CCNA_03247	0.80	+0.1
3,415,238	+		CCNA_03247	0.80	+0.1
3,415,239	+		CCNA_03247	0.80	-0.3
3,415,249	+		CCNA_03247	0.81	+0.3
3,415,257	+		CCNA_03247	0.81	-0.7
3,415,257	-		CCNA_03247	0.81	-1.4
3,415,301	-		CCNA_03247	0.84	+0.3
3,415,301	-		CCNA_03247	0.84	-1.0
3,415,302	-		CCNA_03247	0.84	-2.8
3,415,308	-		CCNA_03247	0.84	-2.1
3,415,378	-		CCNA_03247	0.88	-0.3
3,415,402	-		CCNA_03247	0.89	-1.1
3,415,423	+				+0.7
3,415,460	+				+2.2
3,415,502	+				+1.8
3,415,511	+				+0.9
3,415,658	+				+1.2
3,415,658	+				+1.7
3,415,667	+				+0.8
3,415,702	-				-1.0
3,415,728	+				+0.0
3,415,948	+				-0.1
3,415,956	-				-0.3
3,415,973	+				-0.9
3,415,993	+				-0.7
3,416,009	-				-0.6
3,416,025	+				-0.6
3,416,034	+				+0.7
3,416,050	-				+2.6
3,416,115	+				-2.6
3,416,223	-		CCNA_03248	0.14	+2.0
3,416,278	-		CCNA_03248	0.16	+1.6
3,416,291	-		CCNA_03248	0.17	-1.5
3,416,291	-		CCNA_03248	0.17	-2.5
3,416,296	-		CCNA_03248	0.17	+0.6
3,416,314	-		CCNA_03248	0.18	-2.0
3,416,314	-		CCNA_03248	0.18	-1.8
3,416,564	+		CCNA_03248	0.28	-1.6
3,416,581	+		CCNA_03248	0.28	-1.6
3,416,581	+		CCNA_03248	0.28	+1.5