Strain Fitness in Caulobacter crescentus NA1000 around CCNA_02933

Experiment: PYE_noCalcium 30C survival rep2 28 days

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	PYE_noCalcium 30C survival rep2 28 days
3,091,277	-		CCNA_02930	0.67	+0.0
3,091,278	+		CCNA_02930	0.68	-2.8
3,091,279	+		CCNA_02930	0.68	-1.1
3,091,286	-		CCNA_02930	0.69	-2.4
3,091,287	-		CCNA_02930	0.69	-1.6
3,091,287	-		CCNA_02930	0.69	-1.7
3,091,342	-		CCNA_02930	0.80	+3.0
3,091,394	+		CCNA_02930	0.89	+0.9
3,091,396	+		CCNA_02930	0.90	-2.0
3,091,402	-				-0.4
3,091,460	+				-1.9
3,091,460	+				-0.4
3,091,460	+				-2.3
3,091,468	-				+1.6
3,091,468	-				-0.5
3,091,469	+				+0.4
3,091,470	+				+0.9
3,091,470	+				+0.7
3,091,478	-				+1.8
3,091,478	-				+0.3
3,091,485	+				-1.5
3,091,485	+				-2.7
3,091,617	+				-0.4
3,091,617	+				-1.2
3,091,617	-				-0.4
3,091,618	-				-0.1
3,091,625	-				+1.6
3,091,625	-				+1.4
3,091,625	-				+0.1
3,091,660	-		CCNA_02931	0.20	+3.3
3,091,676	+		CCNA_02931	0.26	+0.5
3,091,699	+		CCNA_02931	0.35	-0.1
3,091,699	+		CCNA_02931	0.35	+2.6
3,091,702	-		CCNA_02931	0.37	+1.6
3,091,712	-		CCNA_02931	0.41	+0.6
3,091,724	-		CCNA_02931	0.46	+1.9
3,091,733	-		CCNA_02931	0.49	+0.1
3,091,761	+		CCNA_02931	0.61	-2.0
3,091,801	-		CCNA_02931	0.77	+1.2
3,091,861	+				-2.0
3,091,861	+				-1.6
3,091,869	-				-0.9
3,091,872	+				+2.9
3,091,894	+				+2.9
3,091,895	+				+5.2
3,091,895	+				+2.9
3,091,895	+				-1.8
3,091,902	-				+0.4
3,091,903	-				-1.2
3,091,903	-				+1.5
3,091,903	-				+4.1
3,091,904	-				-1.6
3,091,962	+				+0.6
3,091,969	+				-2.0
3,091,969	-				-0.7
3,091,970	-				-0.5
3,091,984	+				-0.6
3,091,991	+				+0.1
3,092,001	-				+0.6
3,092,017	-				+0.3
3,092,073	-				+1.9
3,092,174	+				+1.0
3,092,182	-				+2.8
3,092,195	+				+1.3
3,092,242	+				+1.2
3,092,242	+				+1.2
3,092,244	+				+2.3
3,092,250	-				+1.3
3,092,250	-				-0.7
3,092,252	-				+2.9
3,092,255	+				+1.1
3,092,290	+				+0.4
3,092,290	+				+0.3
3,092,293	-				+2.9
3,092,300	+				+0.7
3,092,300	+				+0.4
3,092,300	+				+2.2
3,092,300	+				-0.1
3,092,300	+				+1.8
3,092,305	+				+0.9
3,092,305	+				+1.1
3,092,305	+				-0.3
3,092,308	-				-0.7
3,092,313	-				-2.6
3,092,313	-				-0.3
3,092,313	-				+0.1
3,092,313	-				+1.3
3,092,313	-				+0.4
3,092,341	+				+1.2
3,092,347	+				+1.4
3,092,428	+				+2.2
3,092,428	+				+1.3
3,092,446	-		CCNA_02933	0.11	+0.3
3,092,493	+		CCNA_02933	0.13	+2.2
3,092,501	-		CCNA_02933	0.14	+0.6
3,092,531	+		CCNA_02933	0.16	+0.5
3,092,565	+		CCNA_02933	0.18	+2.0
3,092,576	-		CCNA_02933	0.18	+0.5
3,092,578	-		CCNA_02933	0.18	+1.3
3,092,634	+		CCNA_02933	0.22	+1.6
3,092,642	+		CCNA_02933	0.22	+0.4
3,092,649	+		CCNA_02933	0.22	+1.0
3,092,649	+		CCNA_02933	0.22	+0.4
3,092,651	-		CCNA_02933	0.23	-1.4
3,092,654	+		CCNA_02933	0.23	+1.4
3,092,654	+		CCNA_02933	0.23	+1.5
3,092,654	+		CCNA_02933	0.23	+0.4
3,092,662	-		CCNA_02933	0.23	+2.9
3,092,687	+		CCNA_02933	0.25	+0.1
3,092,692	+		CCNA_02933	0.25	+3.8
3,092,693	+		CCNA_02933	0.25	+0.9
3,092,695	-		CCNA_02933	0.25	-0.5
3,092,695	-		CCNA_02933	0.25	-0.9
3,092,696	-		CCNA_02933	0.25	+1.0
3,092,700	+		CCNA_02933	0.25	+4.3
3,092,759	+		CCNA_02933	0.29	+1.5
3,092,759	+		CCNA_02933	0.29	-0.4
3,092,786	-		CCNA_02933	0.30	+3.3
3,092,806	-		CCNA_02933	0.32	+0.7
3,092,813	+		CCNA_02933	0.32	+2.0
3,092,832	+		CCNA_02933	0.33	+0.1
3,092,836	+		CCNA_02933	0.33	+1.9
3,092,858	+		CCNA_02933	0.35	+0.8
3,092,858	+		CCNA_02933	0.35	-1.2
3,092,858	+		CCNA_02933	0.35	+3.5
3,092,860	+		CCNA_02933	0.35	-0.2
3,092,866	-		CCNA_02933	0.35	-0.2
3,092,866	-		CCNA_02933	0.35	-0.6
3,092,866	-		CCNA_02933	0.35	+0.8
3,092,877	-		CCNA_02933	0.36	-1.6
3,092,877	-		CCNA_02933	0.36	-2.6
3,092,966	+		CCNA_02933	0.41	+0.9
3,092,974	-		CCNA_02933	0.41	+2.4
3,092,975	+		CCNA_02933	0.41	+0.8
3,092,996	+		CCNA_02933	0.43	+0.7
3,092,996	+		CCNA_02933	0.43	+1.9
3,093,004	-		CCNA_02933	0.43	+1.0
3,093,004	-		CCNA_02933	0.43	-1.7
3,093,035	-		CCNA_02933	0.45	+0.4
3,093,070	-		CCNA_02933	0.47	+1.9
3,093,077	+		CCNA_02933	0.47	-0.4
3,093,117	+		CCNA_02933	0.50	-1.5
3,093,155	+		CCNA_02933	0.52	+1.3
3,093,155	+		CCNA_02933	0.52	+2.5
3,093,175	+		CCNA_02933	0.53	+1.1
3,093,175	+		CCNA_02933	0.53	+1.5
3,093,183	-		CCNA_02933	0.54	-2.0
3,093,183	-		CCNA_02933	0.54	-1.1
3,093,200	+		CCNA_02933	0.55	-0.6
3,093,217	-		CCNA_02933	0.56	+3.7
3,093,243	+		CCNA_02933	0.57	+1.3
3,093,251	-		CCNA_02933	0.58	+0.8
3,093,264	-		CCNA_02933	0.58	+0.1
3,093,300	-		CCNA_02933	0.60	-1.3
3,093,311	-		CCNA_02933	0.61	+1.8
3,093,315	+		CCNA_02933	0.61	+2.2
3,093,318	-		CCNA_02933	0.61	+1.5
3,093,326	+		CCNA_02933	0.62	-0.9
3,093,355	+		CCNA_02933	0.64	+1.3
3,093,355	+		CCNA_02933	0.64	+2.0
3,093,355	+		CCNA_02933	0.64	+1.7
3,093,363	-		CCNA_02933	0.64	-0.3
3,093,380	-		CCNA_02933	0.65	-1.8
3,093,380	-		CCNA_02933	0.65	-0.1
3,093,382	+		CCNA_02933	0.65	+2.4
3,093,390	-		CCNA_02933	0.66	+0.3
3,093,399	+		CCNA_02933	0.66	+0.5
3,093,407	-		CCNA_02933	0.67	+1.3
3,093,423	-		CCNA_02933	0.68	-1.4
3,093,437	+		CCNA_02933	0.68	+1.2
3,093,460	+		CCNA_02933	0.70	+1.3
3,093,474	-		CCNA_02933	0.71	-0.3
3,093,477	+		CCNA_02933	0.71	+2.5
3,093,484	+		CCNA_02933	0.71	+0.2
3,093,485	-		CCNA_02933	0.71	+2.1
3,093,500	-		CCNA_02933	0.72	-1.0
3,093,504	-		CCNA_02933	0.72	-1.0
3,093,551	+		CCNA_02933	0.75	+1.6
3,093,559	-		CCNA_02933	0.75	+1.3
3,093,596	-		CCNA_02933	0.78	-3.0
3,093,596	-		CCNA_02933	0.78	+0.9
3,093,690	+		CCNA_02933	0.83	+2.2
3,093,695	+		CCNA_02933	0.83	+1.4
3,093,703	-		CCNA_02933	0.84	-0.3
3,093,718	-		CCNA_02933	0.85	-1.5
3,093,784	+		CCNA_02933	0.89	+2.8
3,093,816	+				+1.9
3,093,824	-				+0.5
3,093,862	+				+2.1
3,093,862	+				+1.5
3,093,889	+				+2.5
3,093,889	+				+1.6
3,093,889	+				+1.9
3,093,897	-				+1.1
3,093,961	+				+0.7
3,093,984	-				-2.5
3,094,015	-				+1.6
3,094,028	+				+0.9
3,094,043	-				-2.5
3,094,047	-				-1.3
3,094,121	+				+1.4
3,094,193	-				+0.9
3,094,326	+		CCNA_02934	0.28	-0.9
3,094,326	+		CCNA_02934	0.28	+1.3
3,094,403	+		CCNA_02934	0.39	-0.7
3,094,403	+		CCNA_02934	0.39	+0.1
3,094,410	+		CCNA_02934	0.40	+2.9
3,094,415	+		CCNA_02934	0.41	-0.7
3,094,415	+		CCNA_02934	0.41	-1.2
3,094,465	+		CCNA_02934	0.48	-0.2
3,094,513	-		CCNA_02934	0.55	-0.4
3,094,515	+		CCNA_02934	0.55	-2.0
3,094,515	+		CCNA_02934	0.55	-0.4
3,094,515	+		CCNA_02934	0.55	-0.4
3,094,523	-		CCNA_02934	0.56	+0.3
3,094,542	-		CCNA_02934	0.59	+0.9
3,094,547	+		CCNA_02934	0.60	-1.7
3,094,555	-		CCNA_02934	0.61	-0.9
3,094,555	-		CCNA_02934	0.61	+2.9
3,094,559	+		CCNA_02934	0.62	+2.9
3,094,573	+		CCNA_02934	0.64	-0.4
3,094,651	+		CCNA_02934	0.75	-1.5
3,094,739	+		CCNA_02934	0.87	+0.1
3,094,739	+		CCNA_02934	0.87	-1.3
3,094,739	+		CCNA_02934	0.87	-0.9
3,094,771	+				-0.3
3,094,776	+				+0.0
3,094,791	+				+0.5
3,094,801	-				-0.7
3,094,817	+				+1.6
3,094,830	-				+2.9
3,094,850	-				-0.6
3,094,857	+				+0.2
3,094,865	-				+0.5
3,094,871	+				+3.0
3,094,879	-				-0.4
3,094,926	+				+0.1